FFCP PHASE1:Hg19::chr6:31785614..31785640,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4593 | |||
|description=CAGE_peak_at_chr6:31785614..31785640,+ | |||
|id=chr6:31785614..31785640,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.10e-10!45;CL:0002057!3.33e-10!42;CL:0000557!2.98e-09!71;CL:0000839!8.48e-09!70;CL:0000766!3.91e-08!76;CL:0002009!4.28e-08!65;CL:0002194!6.66e-08!63;CL:0000576!6.66e-08!63;CL:0000040!6.66e-08!63;CL:0000559!6.66e-08!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.64e-21;33!CL:0002057;2.64e-21;33!CL:0000473;3.10e-16;39!CL:0000234;3.10e-16;39!CL:0000097;2.33e-10;5!CL:0000576;7.42e-10;48!CL:0000766;6.81e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.85e-17,42;CL:0002057,1.85e-17,42;CL:0000839,7.25e-16,66;CL:0000557,1.40e-15,67;CL:0000473,6.14e-15,48;CL:0000234,6.14e-15,48;CL:0000766,2.84e-14,72;CL:0002194,2.05e-11,59;CL:0000576,2.05e-11,59;CL:0000040,2.05e-11,59;CL:0000559,2.05e-11,59;CL:0002009,5.81e-11,61;CL:0000097,2.45e-10,5;CL:0002028,2.45e-10,5;CL:0000763,1.98e-08,108;CL:0000049,1.98e-08,108;CL:0002031,2.88e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.25e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.54e-22!115;UBERON:0001049!7.99e-11!57;UBERON:0005068!7.99e-11!57;UBERON:0006241!7.99e-11!57;UBERON:0007135!7.99e-11!57;UBERON:0005743!4.09e-09!86;UBERON:0001017!8.42e-09!82;UBERON:0000062!1.56e-08!511;UBERON:0003080!2.01e-08!42;UBERON:0002616!2.19e-08!59;UBERON:0002346!2.62e-08!90;UBERON:0000073!7.38e-08!94;UBERON:0001016!7.38e-08!94;UBERON:0003075!7.87e-08!86;UBERON:0007284!7.87e-08!86;UBERON:0002780!1.07e-07!41;UBERON:0001890!1.07e-07!41;UBERON:0006240!1.07e-07!41;UBERON:0002371!3.51e-07!80;UBERON:0000955!6.00e-07!69;UBERON:0006238!6.00e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002133;6.24e-12;2!UBERON:0003978;3.17e-08;3!UBERON:0000946;3.17e-08;3!UBERON:0002134;8.10e-07;1!UBERON:0005208;8.10e-07;1!UBERON:0004145;8.10e-07;1!UBERON:0005946;8.10e-07;1!UBERON:0005965;8.10e-07;1!UBERON:0002078;8.10e-07;1!UBERON:0002135;9.03e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.38e-13,76;UBERON:0001474,3.92e-12,82;UBERON:0002133,5.94e-12,2;UBERON:0002405,9.36e-12,93;UBERON:0002390,5.63e-11,98;UBERON:0003061,5.63e-11,98;UBERON:0004765,9.17e-11,90;UBERON:0002193,1.23e-09,108;UBERON:0001434,2.32e-09,100;UBERON:0003978,3.07e-08,3;UBERON:0009751,3.07e-08,3;UBERON:0000946,3.07e-08,3;UBERON:0002523,3.07e-08,3;UBERON:0005983,3.07e-08,3;UBERON:0002165,3.07e-08,3;UBERON:0002062,3.07e-08,3;UBERON:0007280,3.07e-08,3;UBERON:0007023,7.54e-07,114;UBERON:0002134,7.90e-07,1;UBERON:0005208,7.90e-07,1;UBERON:0005946,7.90e-07,1;UBERON:0005965,7.90e-07,1;UBERON:0002078,7.90e-07,1;UBERON:0002135,8.81e-07,1;UBERON:0000996,9.81e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,1.4555043671269,0.697287110717054,0.411167888021826,1.54853185447552,0.863077176966451,0.512321413058201,2.60130452877444,1.03423704220986,1.93645405075148,1.35426486594342,0,0,1.12361742222542,0.612167784741805,0.641858054152187,1.91801137739712,0.329851300186716,0.199463657621632,1.70489900213078,0,0,1.24564449799115,0.75374599577023,1.0429658368404,2.6062661364614,0,0.368277635987565,2.53169909952708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0.184099797284599,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0.329250856225877,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0.246217006087397,0.468008530278475,0,0,0,0,0,0,0,0,0,6.01251535068239,2.30591925467138,7.19581870530366,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,1.30139853857622,0,0.167516265334349,0.637938751653163,0.749007023947182,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,1.23649213977267,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,2.54188262097304,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.844016498463076,0,0,0,0.996239941255349,0.552567831062295,0,0,0.123084805461069,0,0,0,0,0.887790650732402,0,0,0,0.185536196323703,0,0.260427761085233,0.174919999992391,2.17499872630438,0,0,0,0,0,0,0,0.482385754501632,0,1.10579259931225,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0.167821586975843,0.189753732724185,0,0,0.163232808159148,0,0,0,0.353830258013357,0,0,0,0,0.269604531922708,0,0.702793337176017,0,0,0,0.789168805698781,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0,0.164230914106418,0.775912131907355,0,0,0,0,0,0.586654148204409,0.0801588202515337,0,0.19980960958213,0.144090417154106,0,0.171594997861965,0,0.745515213392595,0.707082103850386,0,0,0.101998217636322,0,0,1.23214841002794,0,0,0,3.35138881526705,0,6.46085722119133,0.199679000498991,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0.408610218334727,0.160753148465019,0,0,0.2249738915515,0,0,0.335434687599266,0.0788057072991982,0.367182116944987,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,1.98348902614035,0,0,0.213574825135389,0.628817220398664,1.24271716604159,0,0,0,0,1.08803560673895,0,0,0.655745261419609,0,0,0.122026264901963,0.751145584238999,0,1.77486482458964,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0.464033759878494,0,0,0.343395705182793,0,0,0.385239660814607,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,1.91560630868582,0.205116364240755,0.504143392443436,0,0.484426936895553,0,0,0,0.183428598521679,0.115525666150338,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,1.44680757550829,0.0634158101939068,0,0,0.496211178389294,2.11045493231545,0,0.535701835878287,0.336283722218824,0,0.227662191351298,0.177404740325278,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0.111231401892069,0.706437835654626,0.157115589916002,0.280272163313789,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0.236664001461131,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0.109940516745429,0.301925687133347,0,0,0,0,0,0.196308467114945,3.26751040359795,0,0,0,1.03132620757723,0,0.178553938605658,0,0,0,0,1.86341458096887,0,0.0679914901909147,0,1.0580536810308,0,0,0,0,0,0,0.101988829741982,0.26721740526556,2.20547758883628,0,0.151557396436479,0,0,1.34462894620464,0.639701945702943,0,0,0.186224142887574,0,0.572824424503484,0.404234377916439,0,0,0,0.573777643141411,0.332660356546013,0,0,0,0,0,0.611207220914332,0.813792356631477,2.66302709674205,0.201273793591026,0 | |||
|short_description=p@chr6:31785614..31785640,+ | |||
}} |
Revision as of 11:08, 22 January 2014
Short description: | p@chr6:31785614..31785640, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:31785614..31785640, + |
Coexpression cluster: | C4593_Mast_heart_vagina_aorta_peripheral_substantia_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.85e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.85e-17 | 42 |
myeloid lineage restricted progenitor cell | 7.25e-16 | 66 |
granulocyte monocyte progenitor cell | 1.40e-15 | 67 |
defensive cell | 6.14e-15 | 48 |
phagocyte | 6.14e-15 | 48 |
myeloid leukocyte | 2.84e-14 | 72 |
monopoietic cell | 2.05e-11 | 59 |
monocyte | 2.05e-11 | 59 |
monoblast | 2.05e-11 | 59 |
promonocyte | 2.05e-11 | 59 |
macrophage dendritic cell progenitor | 5.81e-11 | 61 |
mast cell | 2.45e-10 | 5 |
basophil mast progenitor cell | 2.45e-10 | 5 |
myeloid cell | 1.98e-08 | 108 |
common myeloid progenitor | 1.98e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 2.88e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.38e-13 | 76 |
bone element | 3.92e-12 | 82 |
atrioventricular valve | 5.94e-12 | 2 |
immune system | 9.36e-12 | 93 |
hematopoietic system | 5.63e-11 | 98 |
blood island | 5.63e-11 | 98 |
skeletal element | 9.17e-11 | 90 |
hemolymphoid system | 1.23e-09 | 108 |
skeletal system | 2.32e-09 | 100 |
valve | 3.07e-08 | 3 |
cardiac mesenchyme | 3.07e-08 | 3 |
cardial valve | 3.07e-08 | 3 |
tunica intima | 3.07e-08 | 3 |
heart layer | 3.07e-08 | 3 |
endocardium | 3.07e-08 | 3 |
endocardial cushion | 3.07e-08 | 3 |
presumptive endocardium | 3.07e-08 | 3 |
adult organism | 7.54e-07 | 114 |
tricuspid valve | 7.90e-07 | 1 |
right atrium valve | 7.90e-07 | 1 |
outflow tract of atrium | 7.90e-07 | 1 |
outflow part of right atrium | 7.90e-07 | 1 |
right cardiac atrium | 7.90e-07 | 1 |
mitral valve | 8.81e-07 | 1 |
vagina | 9.81e-07 | 1 |