FFCP PHASE1:Hg19::chr6:29600832..29600982,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2550 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4070 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UBS5,F8WF38 | |||
|association_with_transcript=0bp_to_ENST00000376977,ENST00000377016,ENST00000377034,ENST00000467259,ENST00000472823,NM_001470,NM_021904,uc003nmt.3,uc003nmu.3,uc011dlr.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_GABBR1_5end | |||
|id=chr6:29600832..29600982,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.03e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.51e-38!115;UBERON:0001049!6.24e-27!57;UBERON:0005068!6.24e-27!57;UBERON:0006241!6.24e-27!57;UBERON:0007135!6.24e-27!57;UBERON:0001017!6.02e-26!82;UBERON:0005743!9.33e-26!86;UBERON:0000073!5.03e-25!94;UBERON:0001016!5.03e-25!94;UBERON:0002616!1.71e-23!59;UBERON:0002346!1.88e-22!90;UBERON:0003080!5.52e-22!42;UBERON:0002780!6.50e-22!41;UBERON:0001890!6.50e-22!41;UBERON:0006240!6.50e-22!41;UBERON:0003075!2.18e-21!86;UBERON:0007284!2.18e-21!86;UBERON:0000955!5.73e-21!69;UBERON:0006238!5.73e-21!69;UBERON:0001893!3.24e-19!34;UBERON:0002020!3.32e-19!34;UBERON:0003528!3.32e-19!34;UBERON:0002791!1.52e-18!33;UBERON:0001869!3.11e-18!32;UBERON:0000924!3.68e-17!173;UBERON:0006601!3.68e-17!173;UBERON:0004121!3.35e-16!169;UBERON:0003056!1.04e-14!61;UBERON:0002619!2.24e-14!22;UBERON:0000956!2.94e-14!25;UBERON:0000203!2.94e-14!25;UBERON:0000033!4.53e-14!123;UBERON:0000153!6.50e-14!129;UBERON:0007811!6.50e-14!129;UBERON:0001950!2.91e-13!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.88e-17;34!UBERON:0001869;1.03e-16;32!UBERON:0003528;1.12e-16;34!UBERON:0002020;1.12e-16;34!UBERON:0002791;1.52e-16;32!UBERON:0002780;3.13e-16;41!UBERON:0001890;3.13e-16;41!UBERON:0000073;5.13e-15;53!UBERON:0002616;5.13e-15;53!UBERON:0002619;1.76e-14;22!UBERON:0000956;1.93e-14;25!UBERON:0000203;1.93e-14;25!UBERON:0001950;2.40e-13;20!UBERON:0007023;1.12e-10;114!UBERON:0000955;1.94e-10;68!UBERON:0001017;5.08e-10;75!UBERON:0001016;2.58e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.38e-38,114;UBERON:0001049,6.53e-27,56;UBERON:0005068,6.53e-27,56;UBERON:0006241,6.53e-27,56;UBERON:0007135,6.53e-27,56;UBERON:0001017,6.09e-26,81;UBERON:0000073,2.42e-25,53;UBERON:0002616,2.42e-25,53;UBERON:0001016,4.20e-25,89;UBERON:0002780,5.63e-22,41;UBERON:0001890,5.63e-22,41;UBERON:0003080,5.63e-22,41;UBERON:0006240,5.63e-22,41;UBERON:0002346,9.46e-22,86;UBERON:0000955,5.98e-21,68;UBERON:0006238,5.98e-21,68;UBERON:0003075,1.09e-20,82;UBERON:0007284,1.09e-20,82;UBERON:0001893,2.86e-19,34;UBERON:0003528,2.93e-19,34;UBERON:0002020,2.93e-19,34;UBERON:0001869,2.76e-18,32;UBERON:0002791,4.64e-18,32;UBERON:0004121,8.03e-17,171;UBERON:0000924,8.03e-17,171;UBERON:0006601,8.03e-17,171;UBERON:0010371,5.42e-15,104;UBERON:0003056,7.07e-15,61;UBERON:0002619,2.05e-14,22;UBERON:0000956,2.69e-14,25;UBERON:0000203,2.69e-14,25;UBERON:0010314,4.50e-14,132;UBERON:0001950,2.68e-13,20;UBERON:0011216,6.37e-07,223 | |||
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| |||
|short_description=p2@GABBR1 | |||
}} |
Revision as of 10:44, 22 January 2014
Short description: | p2@GABBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GABBR1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000376977, ENST00000377016, ENST00000377034, ENST00000467259, ENST00000472823, NM_001470, NM_021904, uc003nmt.3, uc003nmu.3, uc011dlr.1_5end |
EntrezGene: | GABBR1 |
HGNC: | 4070 |
UniProt: | Q9UBS5F8WF38 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data