FFCP PHASE1:Hg19::chr6:21664489..21664494,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C724 | |||
|description=CAGE_peak_at_chr6:21664489..21664494,+ | |||
|id=chr6:21664489..21664494,+ | |||
|ontology_enrichment_celltype=CL:0000064!7.94e-19!3;CL:0005012!7.94e-19!3;CL:0000067!7.94e-19!3;CL:0002304!7.94e-19!3;CL:1001319!4.73e-15!1;CL:1000600!4.73e-15!1;CL:0002322!1.76e-11!5;CL:0000039!1.85e-08!7;CL:0000586!1.85e-08!7 | |||
|ontology_enrichment_celltype_v019=CL:1001319;1.55e-98;1!CL:1000600;1.55e-98;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,9.37e-99,1;CL:1000600,9.37e-99,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!7.94e-19!3;UBERON:0001775!7.94e-19!3;UBERON:0004645!4.73e-15!1;UBERON:0001256!4.73e-15!1;UBERON:0001259!4.73e-15!1;UBERON:0000488!2.26e-14!4;UBERON:0002363!2.75e-14!1;UBERON:0007647!2.75e-14!1;UBERON:0010115!2.75e-14!1;UBERON:0002203!6.79e-10!6;UBERON:0001768!6.79e-10!6;UBERON:0001255!3.56e-08!2;UBERON:0001556!3.56e-08!2;UBERON:0002360!8.60e-08!2;UBERON:0000094!8.60e-08!2;UBERON:0007645!8.60e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.55e-98;1!UBERON:0001256;1.55e-98;1!UBERON:0001259;1.55e-98;1!UBERON:0001255;3.52e-50;2!UBERON:0001556;3.52e-50;2!UBERON:0001872;4.66e-21;5!UBERON:0000365;4.66e-21;5!UBERON:0005910;8.34e-18;6!UBERON:0003350;1.00e-13;8!UBERON:0000486;1.27e-09;12!UBERON:0002075;7.39e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,9.37e-99,1;UBERON:0001256,9.37e-99,1;UBERON:0001259,9.37e-99,1;UBERON:0001255,2.74e-50,2;UBERON:0001556,2.74e-50,2;UBERON:0000365,4.21e-21,5;UBERON:0001872,5.15e-21,5;UBERON:0005910,7.67e-18,6;UBERON:0003350,9.39e-14,8;UBERON:0000162,1.86e-08,14;UBERON:0001353,1.86e-08,14;UBERON:0000163,1.86e-08,14;UBERON:0006866,1.86e-08,14;UBERON:0000164,1.86e-08,14;UBERON:0000931,1.86e-08,14;UBERON:0004122,5.55e-08,15;UBERON:0002075,7.18e-07,18 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90356865631168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87227517805241,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:21664489..21664494,+ | |||
}} |
Revision as of 10:24, 22 January 2014
Short description: | p@chr6:21664489..21664494, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:21664489..21664494, + |
Coexpression cluster: | C724_transitionalcell_parietal_occipital_duodenum_temporal_non_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 9.37e-99 | 1 |
lower urinary tract cell | 9.37e-99 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 9.37e-99 | 1 |
wall of urinary bladder | 9.37e-99 | 1 |
mucosa of urinary bladder | 9.37e-99 | 1 |
urinary bladder | 2.74e-50 | 2 |
lower urinary tract | 2.74e-50 | 2 |
urothelium | 4.21e-21 | 5 |
parietal lobe | 5.15e-21 | 5 |
transitional epithelium | 7.67e-18 | 6 |
epithelium of mucosa | 9.39e-14 | 8 |
cloaca | 1.86e-08 | 14 |
anal region | 1.86e-08 | 14 |
embryonic cloaca | 1.86e-08 | 14 |
terminal part of digestive tract | 1.86e-08 | 14 |
primitive urogenital sinus | 1.86e-08 | 14 |
proctodeum | 1.86e-08 | 14 |
genitourinary system | 5.55e-08 | 15 |
viscus | 7.18e-07 | 18 |