FFCP PHASE1:Hg19::chr5:178260112..178260119,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3774 | |||
|description=CAGE_peak_at_chr5:178260112..178260119,+ | |||
|id=chr5:178260112..178260119,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.32e-10!5;CL:0002097!9.82e-08!2;CL:0002563!1.88e-07!4;CL:0002253!3.86e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000540;5.68e-12;6!CL:0000404;5.68e-12;6!CL:0002097;1.27e-09;2!CL:0000322;6.14e-07;3!CL:0000174;7.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.08e-12,6;CL:0000031,5.08e-12,6;CL:0000404,5.08e-12,6;CL:0002097,1.33e-09,2;CL:0000047,3.01e-09,8;CL:0000322,6.14e-07,3;CL:0000174,8.15e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;5.68e-12;6!UBERON:0009117;1.47e-07;10!UBERON:0005564;1.47e-07;10 | |||
|ontology_enrichment_disease=DOID:162!2.04e-14!235;DOID:14566!6.58e-14!239;DOID:0050687!4.81e-13!143;DOID:0050686!1.71e-10!137;DOID:305!2.41e-09!106;DOID:3905!4.01e-09!9;DOID:299!4.32e-09!25;DOID:5409!7.91e-08!4;DOID:1325!8.38e-08!7;DOID:3904!8.38e-08!7 | |||
|ontology_enrichment_disease_v019=DOID:6193;6.78e-18;1!DOID:3910;8.69e-10;2!DOID:3350;1.27e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.23e-18,1;DOID:3910,8.69e-10,2;DOID:3350,1.22e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001242!1.88e-07!4;UBERON:0001262!1.88e-07!4;UBERON:0004786!1.88e-07!4;UBERON:0004808!1.88e-07!4;UBERON:0001277!1.88e-07!4;UBERON:0000013!7.20e-07!5;UBERON:0002410!7.20e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;8.69e-10;2!UBERON:0002173;8.69e-10;2!UBERON:0002186;8.69e-10;2!UBERON:0000473;3.14e-09;8!UBERON:0003135;5.98e-07;11!UBERON:0004821;6.14e-07;3!UBERON:0007499;6.14e-07;3!UBERON:0003215;6.14e-07;3!UBERON:0010368;6.14e-07;3!UBERON:0009911;6.14e-07;3!UBERON:0002299;6.14e-07;3!UBERON:0006524;6.14e-07;3!UBERON:0008874;6.14e-07;3!UBERON:0002169;6.14e-07;3!UBERON:0004894;6.14e-07;3!UBERON:0002369;7.92e-07;3!UBERON:0001235;7.92e-07;3!UBERON:0006858;7.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,8.69e-10,2;UBERON:0002173,8.69e-10,2;UBERON:0002186,8.69e-10,2;UBERON:0000473,3.14e-09,8;UBERON:0003135,5.98e-07,11;UBERON:0004821,6.14e-07,3;UBERON:0003215,6.14e-07,3;UBERON:0010368,6.14e-07,3;UBERON:0009911,6.14e-07,3;UBERON:0002299,6.14e-07,3;UBERON:0006524,6.14e-07,3;UBERON:0008874,6.14e-07,3;UBERON:0002169,6.14e-07,3;UBERON:0004894,6.14e-07,3;UBERON:0002369,8.15e-07,3;UBERON:0001235,8.15e-07,3;UBERON:0006858,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.265059536642971,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0.540911356951966,0,0,0.18714054040822,0,0,14.7105267246271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.272233618737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0.141353071433941,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,3.78369271437556,0,0,0,0,0,0,0.411125773940253,0.397429223405979,0,0,0.0801588202515337,0,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338693328263138,0,0,0.160753148465019,1.78801267576404,4.56984371832104,0,0,0,0,0,0.0524545881349981,0.528001682597033,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08191728651685,0.214441591374926,0,0,0.231522474323834,17.1315693154527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,1.40683808434017,0,0,0.982886743728125,0,0,0,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0.869291361512897,0,0,0,0,0,0,0,0,0,1.5510319283216,0.955538938977433,0,0.785201868921944,0,0,0,0,0.485710993059139,0,0,0,0.11294608203896,0.329821550236287,0.603851374266694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504665699340316,0,0.126698501011437,0,0,0,0,1.43979526614655,5.35928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:178260112..178260119,+ | |||
}} |
Revision as of 09:23, 22 January 2014
Short description: | p@chr5:178260112..178260119, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:178260112..178260119, + |
Coexpression cluster: | C3774_mesothelioma_bronchioalveolar_adult_embryonic_testis_large_serous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.08e-12 | 6 |
neuroblast | 5.08e-12 | 6 |
electrically signaling cell | 5.08e-12 | 6 |
cortical cell of adrenal gland | 1.33e-09 | 2 |
neuronal stem cell | 3.01e-09 | 8 |
pneumocyte | 6.14e-07 | 3 |
steroid hormone secreting cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 8.69e-10 | 2 |
alveolar duct | 8.69e-10 | 2 |
bronchiole | 8.69e-10 | 2 |
testis | 3.14e-09 | 8 |
male reproductive organ | 5.98e-07 | 11 |
pulmonary alveolus epithelium | 6.14e-07 | 3 |
alveolus | 6.14e-07 | 3 |
pulmonary lobule | 6.14e-07 | 3 |
lobule | 6.14e-07 | 3 |
alveolus of lung | 6.14e-07 | 3 |
alveolar system | 6.14e-07 | 3 |
pulmonary acinus | 6.14e-07 | 3 |
alveolar sac | 6.14e-07 | 3 |
alveolar wall | 6.14e-07 | 3 |
adrenal gland | 8.15e-07 | 3 |
adrenal cortex | 8.15e-07 | 3 |
adrenal/interrenal gland | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.23e-18 | 1 |
lung adenocarcinoma | 8.69e-10 | 2 |
mesenchymal cell neoplasm | 1.22e-09 | 2 |