FFCP PHASE1:Hg19::chr5:176853669..176853701,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2870 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4545 | |||
|TSSclassifier=strong | |||
|UniProt=P43250 | |||
|association_with_transcript=0bp_to_ENST00000355472,NM_001004105,NM_001004106,NM_002082,uc003mgp.2,uc003mgq.2,uc011dfz.1_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_1_at_GRK6_5end | |||
|id=chr5:176853669..176853701,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.17e-43!172;CL:0000566!6.17e-43!172;CL:0000988!7.15e-41!182;CL:0002032!1.83e-39!165;CL:0000837!1.83e-39!165;CL:0000738!2.29e-37!140;CL:0002087!4.76e-32!119;CL:0002031!6.45e-32!124;CL:0000838!4.51e-22!52;CL:0000542!3.29e-21!53;CL:0000051!3.29e-21!53;CL:0000763!2.62e-18!112;CL:0000049!2.62e-18!112;CL:0000766!1.78e-14!76;CL:0000084!1.28e-12!25;CL:0000827!1.28e-12!25;CL:0000791!9.31e-12!18;CL:0000789!9.31e-12!18;CL:0002420!9.31e-12!18;CL:0002419!9.31e-12!18;CL:0000790!9.31e-12!18;CL:0000839!2.47e-11!70;CL:0000557!2.50e-11!71;CL:0002009!6.37e-11!65;CL:0002194!8.48e-11!63;CL:0000576!8.48e-11!63;CL:0000040!8.48e-11!63;CL:0000559!8.48e-11!63;CL:0002057!1.04e-10!42;CL:0000945!1.69e-09!24;CL:0000826!1.69e-09!24;CL:0000860!2.62e-08!45;CL:0000236!3.69e-08!14;CL:0000625!6.43e-08!11;CL:0000003!9.43e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0000542;7.27e-13;53!CL:0000084;1.24e-12;25!CL:0000791;8.58e-12;18!CL:0000789;8.58e-12;18!CL:0002419;8.58e-12;18!CL:0002087;1.45e-09;104!CL:0000945;1.55e-09;24!CL:0000738;5.61e-09;136!CL:0000236;3.67e-08;13!CL:0000625;6.05e-08;11!CL:0000576;9.79e-08;48!CL:0000766;1.05e-07;69!CL:0000473;1.08e-07;39!CL:0000234;1.08e-07;39!CL:0000988;1.23e-07;177!CL:0000860;3.24e-07;33!CL:0002057;3.24e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.66e-46,168;CL:0000988,1.02e-43,177;CL:0002032,9.72e-43,161;CL:0000837,9.72e-43,161;CL:0000738,7.05e-41,136;CL:0002087,1.39e-35,115;CL:0002031,2.39e-35,120;CL:0000838,4.51e-22,52;CL:0000542,3.29e-21,53;CL:0000051,3.29e-21,53;CL:0000763,7.23e-21,108;CL:0000049,7.23e-21,108;CL:0000766,2.74e-17,72;CL:0000839,7.43e-14,66;CL:0000557,7.93e-14,67;CL:0002009,1.66e-13,61;CL:0002194,2.05e-13,59;CL:0000576,2.05e-13,59;CL:0000040,2.05e-13,59;CL:0000559,2.05e-13,59;CL:0000084,1.28e-12,25;CL:0000827,1.28e-12,25;CL:0000473,3.53e-12,48;CL:0000234,3.53e-12,48;CL:0000791,9.31e-12,18;CL:0000789,9.31e-12,18;CL:0002420,9.31e-12,18;CL:0002419,9.31e-12,18;CL:0000790,9.31e-12,18;CL:0000860,1.04e-10,42;CL:0002057,1.04e-10,42;CL:0000945,1.69e-09,24;CL:0000826,1.69e-09,24;CL:0000236,3.69e-08,14;CL:0000625,6.43e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000051;7.27e-13;53!CL:0000790;8.58e-12;18!CL:0002057;3.52e-08;42!CL:0000049;7.21e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.06e-15!102;UBERON:0003061!2.06e-15!102;UBERON:0002193!1.92e-13!112;UBERON:0002371!2.15e-10!80;UBERON:0001474!2.12e-09!86;UBERON:0002405!1.73e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.71e-18,98;UBERON:0003061,7.71e-18,98;UBERON:0002193,1.54e-15,108;UBERON:0002371,1.41e-12,76;UBERON:0002405,4.36e-12,93;UBERON:0001474,2.36e-11,82;UBERON:0004765,1.64e-08,90;UBERON:0001434,7.16e-07,100 | |||
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| |||
|short_description=p1@GRK6 | |||
}} |
Revision as of 09:19, 22 January 2014
Short description: | p1@GRK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRK6_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | 0bp_to_ENST00000355472, NM_001004105, NM_001004106, NM_002082, uc003mgp.2, uc003mgq.2, uc011dfz.1_5end |
EntrezGene: | GRK6 |
HGNC: | 4545 |
UniProt: | P43250 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.71e-18 | 98 |
blood island | 7.71e-18 | 98 |
hemolymphoid system | 1.54e-15 | 108 |
bone marrow | 1.41e-12 | 76 |
immune system | 4.36e-12 | 93 |
bone element | 2.36e-11 | 82 |
skeletal element | 1.64e-08 | 90 |
skeletal system | 7.16e-07 | 100 |