FFCP PHASE1:Hg19::chr5:150639431..150639450,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2760 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4367 | |||
|TSSclassifier=weak | |||
|UniProt=Q14427 | |||
|association_with_transcript=115bp_to_uc003ltt.1_5end | |||
|coexpression_cluster_id=C71 | |||
|description=CAGE_peak_8_at_GM2A_5end | |||
|id=chr5:150639431..150639450,+ | |||
|ontology_enrichment_celltype=CL:0000839!2.98e-21!70;CL:0000557!1.35e-20!71;CL:0002194!9.75e-19!63;CL:0000576!9.75e-19!63;CL:0000040!9.75e-19!63;CL:0000559!9.75e-19!63;CL:0002009!1.78e-18!65;CL:0000766!3.75e-18!76;CL:0002057!1.77e-15!42;CL:0000860!1.57e-13!45;CL:0000763!7.92e-10!112;CL:0000049!7.92e-10!112;CL:0002031!7.99e-10!124;CL:0000738!8.23e-08!140;CL:0002087!1.41e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.89e-28;6!CL:0000473;2.75e-17;39!CL:0000234;2.75e-17;39!CL:0002615;1.78e-09;3!CL:0000860;1.19e-07;33!CL:0002057;1.19e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.85e-28,6;CL:0002194,1.31e-21,59;CL:0000576,1.31e-21,59;CL:0000040,1.31e-21,59;CL:0000559,1.31e-21,59;CL:0002009,8.15e-21,61;CL:0000839,4.90e-19,66;CL:0000557,1.03e-18,67;CL:0000473,2.60e-17,48;CL:0000234,2.60e-17,48;CL:0000766,3.18e-17,72;CL:0000763,1.52e-10,108;CL:0000049,1.52e-10,108;CL:0002087,9.91e-10,115;CL:0002615,1.78e-09,3;CL:0002031,3.31e-09,120;CL:0000738,8.64e-08,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.16e-19!80;UBERON:0001474!7.92e-17!86;UBERON:0004765!9.64e-16!101;UBERON:0001434!9.64e-16!101;UBERON:0002390!1.13e-13!102;UBERON:0003061!1.13e-13!102;UBERON:0002193!1.33e-11!112;UBERON:0002405!1.53e-10!115;UBERON:0002204!4.06e-08!167;UBERON:0003081!3.58e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.00e-07;1!UBERON:0006518;1.00e-07;1!UBERON:0008949;1.00e-07;1!UBERON:0000101;1.00e-07;1!UBERON:0002167;1.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.58e-16,76;UBERON:0004765,3.80e-15,90;UBERON:0001474,8.72e-15,82;UBERON:0001434,2.50e-13,100;UBERON:0002405,1.05e-12,93;UBERON:0002390,6.53e-12,98;UBERON:0003061,6.53e-12,98;UBERON:0002193,1.52e-10,108;UBERON:0002204,8.82e-08,167;UBERON:0002171,9.72e-08,1;UBERON:0006518,9.72e-08,1;UBERON:0008949,9.72e-08,1;UBERON:0000101,9.72e-08,1;UBERON:0002167,9.72e-08,1 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,1.78784437770915,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0.0764134057479513,0.410502947249729,0,0,0,0,0,1.50602959389125,0.369754010166788,0.0774672005803016,0,0,0,0.401088894940283,0.217010870715852,0.447830948479849,2.26725566213286,0.77272670290256,1.01778767145695,0.377875943688809,0.242584061187816,0.464858073811369,0.411167888021826,0.309706370895104,0.863077176966451,0.512321413058201,0.47296445977717,0,0,1.35426486594342,0.376484679085209,0.545812300115692,0.224723484445085,0.612167784741805,0.320929027076094,0,0.659702600373432,0.797854630486527,0.426224750532694,1.45104619314292,0.56738522469114,1.24564449799115,0.502497330513487,1.0429658368404,1.08594422352558,0.605399502633369,1.10483290796269,0.632924774881769,0,0.425208599930087,0.209658645508376,0.336985893439485,0.450530678524519,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0.50133791063589,0,0,0,0.189069634328136,0,0.351339142772504,0,1.82147644146271,0,0.97364218096405,3.13433527138681,9.1740992758017,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0.860509862246441,0.354668382198357,0,0,0,0.311211035399766,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0.179389635688862,0,0.423863802319124,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.57978255948989,0,0,0,0.132529768321485,0,0,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0.219500570817251,0,0.201057944823262,0.277765335475589,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0,0,0,0.738651018262192,5.14809383306323,4.90482835552803,0,0.503946384596579,0.141775097242386,0,0.290633938513962,0.766765358330422,0.492663237895943,0.264145302039678,0.829312462163088,0.432359860250884,0.37872730027914,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0.600686115687835,1.14330573052231,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0.199945982364114,9.72990245129524,10.0451418286425,23.1917333431335,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0,1.00034104211935,0,0,0.356857977594324,0,0,0,0,1.03473071292505,0,0,0.173767228936166,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0.232420756919918,0,1.60405176242628,0.552485933615378,0.114814448164607,0.364182336013434,0.262248829918848,0,0.0770153371044148,0,0,0,1.13733384070897,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0,0.154048617114644,0.460511024178389,0.137836572484531,0.107420244868274,0,0.340906509664404,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0.243713489631284,1.05650146756755,0,0.141405431953713,0,0,0,0.438450885253763,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0.43050537267123,1.68471475667626,0.886860307073351,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0.245040215981032,0,0,0.0711418433484141,0,0.399158742865633,0,0,0.324621940274555,0,0,0,0,0,0.1605880751037,0,0,0.343505344755765,0,0,0.166849141711909,0,0,0,0,0,0,0.37428108081644,0.439524537815682,0,0.111443384277478,0,0.47748896947538,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0.341380344856499,0,0,0,0.291604613383254,0.173624994933292,0,0.241192877250816,0,0,0.591095237907095,0,0,0.557694977114413,0.153900517007594,0,0.23056390438806,0.897576444097721,0,0.638002319463839,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.468528891450678,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0,0,0.0846733320657845,0,0,0,0.412618309791701,0,0.2249738915515,0,0.0607495566580247,0.335434687599266,0,0,0,0.35857467866569,0,0.714695326373367,0.662091970365432,0.25426853765475,0,2.5926644736038,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0.533937062838473,0,1.24271716604159,0,0.395223263795889,0,0,0,0.2506898940227,0,0,0,0,0.488105059607853,0,0,0,0.0620964029413835,0.138348634936231,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0.151230923763239,0.15543720058278,0.147855149989634,0,0,0,0.414706207840855,0,0,0.450772826991655,0.380805212168795,0.406870733204662,0,0.214821114084977,0,0.398095888698616,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0,0,0,0.308801447160972,0.219284049578707,0.706756583783524,0,0,0,0,0.303859956177382,0.138258436151731,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0.172214979660816,0,0.184105950251841,0.139879507719444,1.24415452006595,0,0,0,0,0.33946505990805,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0,0,0,0,1.10057159113007,0,0,0,0,0.0752103283492573,0.40341013740704,0,0.261906694481422,0.327543835020193,0,0.135075169236789,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.354809480650555,0.230467975111559,0.171488009437418,0,0,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0.62164849248911,1.7071847709395,0,0,0,0.0852134047591577,0.846774100381858,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0.150962843566674,0,0,0,0,0,0.392616934229891,0,0.4226557275834,0,0.187967835959707,0,0.0999411559249289,0.178553938605658,0.352894871715692,0,0.730336388246517,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0.252332849670158,0,0.253397002022874,0.101988829741982,0,0.0918948995348449,0.250707539292375,0.454672189309436,0,0,0,0.213233981900981,0.23806443146374,0.0645889098360061,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0.653150243690884,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,0.641136984606466 | |||
|short_description=p8@GM2A | |||
}} |
Revision as of 08:30, 22 January 2014
Short description: | p8@GM2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GM2A_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | 115bp_to_uc003ltt.1_5end |
EntrezGene: | GM2A |
HGNC: | 4367 |
UniProt: | Q14427 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.85e-28 | 6 |
monopoietic cell | 1.31e-21 | 59 |
monocyte | 1.31e-21 | 59 |
monoblast | 1.31e-21 | 59 |
promonocyte | 1.31e-21 | 59 |
macrophage dendritic cell progenitor | 8.15e-21 | 61 |
myeloid lineage restricted progenitor cell | 4.90e-19 | 66 |
granulocyte monocyte progenitor cell | 1.03e-18 | 67 |
defensive cell | 2.60e-17 | 48 |
phagocyte | 2.60e-17 | 48 |
myeloid leukocyte | 3.18e-17 | 72 |
myeloid cell | 1.52e-10 | 108 |
common myeloid progenitor | 1.52e-10 | 108 |
nongranular leukocyte | 9.91e-10 | 115 |
adipocyte of omentum tissue | 1.78e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 3.31e-09 | 120 |
leukocyte | 8.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.58e-16 | 76 |
skeletal element | 3.80e-15 | 90 |
bone element | 8.72e-15 | 82 |
skeletal system | 2.50e-13 | 100 |
immune system | 1.05e-12 | 93 |
hematopoietic system | 6.53e-12 | 98 |
blood island | 6.53e-12 | 98 |
hemolymphoid system | 1.52e-10 | 108 |
musculoskeletal system | 8.82e-08 | 167 |
lower lobe of right lung | 9.72e-08 | 1 |
right lung lobe | 9.72e-08 | 1 |
lower lobe of lung | 9.72e-08 | 1 |
lobe of lung | 9.72e-08 | 1 |
right lung | 9.72e-08 | 1 |