FFCP PHASE1:Hg19::chr5:150407695..150407704,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C331 | |||
|description=CAGE_peak_at_chr5:150407695..150407704,+ | |||
|id=chr5:150407695..150407704,+ | |||
|ontology_enrichment_celltype=CL:0002368!1.22e-10!13;CL:0000136!2.85e-09!15;CL:0002202!2.33e-08!9;CL:0002632!2.33e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002202;3.45e-10;9!CL:0002632;3.45e-10;9!CL:0002615;5.39e-09;3!CL:0002328;1.72e-08;3!CL:0000307;2.08e-08;3!CL:0002616;2.22e-07;1!CL:0000136;2.22e-07;13!CL:0002368;4.44e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,3.54e-10,9;CL:0002632,3.54e-10,9;CL:0002615,5.50e-09,3;CL:0002328,1.28e-08,3;CL:0000068,2.91e-08,3;CL:0000069,2.91e-08,3;CL:0000307,2.91e-08,3;CL:0000377,2.91e-08,3;CL:0002616,2.22e-07,1;CL:0002368,4.52e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000377;2.08e-08;3!UBERON:0009143;9.23e-07;1!UBERON:0010227;9.23e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.49e-12;2!DOID:178;9.23e-07;1!DOID:326;9.23e-07;1!DOID:3978;9.23e-07;1!DOID:3394;9.23e-07;1!DOID:5844;9.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.64e-12,2;DOID:178,6.76e-07,1;DOID:326,6.76e-07,1;DOID:3978,6.76e-07,1;DOID:3394,6.76e-07,1;DOID:5844,6.76e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.63e-27!115;UBERON:0003296!6.11e-07!4;UBERON:0010133!6.11e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.72e-08;3!UBERON:0002031;1.72e-08;3!UBERON:0005181;5.47e-08;35!UBERON:0000996;4.37e-07;1!UBERON:0000915;5.13e-07;52!UBERON:0005178;5.57e-07;34!UBERON:0002224;5.57e-07;34!UBERON:0002079;9.23e-07;1!UBERON:0002135;9.23e-07;1!UBERON:0002171;9.23e-07;1!UBERON:0002426;9.23e-07;1!UBERON:0003831;9.23e-07;1!UBERON:0003898;9.23e-07;1!UBERON:0004830;9.23e-07;1!UBERON:0006518;9.23e-07;1!UBERON:0008949;9.23e-07;1!UBERON:0003830;9.23e-07;1!UBERON:0005175;9.23e-07;1!UBERON:0001774;9.23e-07;1!UBERON:0000101;9.23e-07;1!UBERON:0001103;9.23e-07;1!UBERON:0002167;9.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.71e-12,114;UBERON:0000915,7.72e-11,52;UBERON:0005181,6.33e-09,35;UBERON:0004815,1.28e-08,3;UBERON:0002031,1.28e-08,3;UBERON:0009569,3.73e-08,112;UBERON:0005178,4.02e-07,34;UBERON:0002224,4.02e-07,34;UBERON:0000996,4.25e-07,1;UBERON:0002135,7.57e-07,1;UBERON:0002171,8.02e-07,1;UBERON:0006518,8.02e-07,1;UBERON:0008949,8.02e-07,1;UBERON:0000101,8.02e-07,1;UBERON:0002167,8.02e-07,1;UBERON:0002426,8.98e-07,1;UBERON:0003831,8.98e-07,1;UBERON:0003898,8.98e-07,1;UBERON:0004830,8.98e-07,1;UBERON:0003830,8.98e-07,1;UBERON:0005175,8.98e-07,1;UBERON:0001774,8.98e-07,1;UBERON:0001103,8.98e-07,1;UBERON:0010084,8.98e-07,1 | |||
|phase1_expression=0.363356758541113,1.49870366723688,0.986680828671798,11.0080628188443,7.15137751083661,9.59572376510406,0,0,0.783556884599516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.154816123316076,1.83884244895785,0.6024118375565,3.32778609150109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,3.20898734969396,0,0,0.649094787309367,0,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0.671928512795438,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.15312891703765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.241718899183244,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0.183138929636687,0,0,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.192190067365106,0,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11300293513511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.48111056362756,2.01090682660736,1.08890984861323,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61158997199083,0,0,0,0.47748896947538,0,0,0.994147647766298,0,0,0,0,0.597743964753209,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.887790650732402,0,0,1.93866549219044,0.0927680981618513,0,0,0,5.79999660347835,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.461701551022782,0,0,0,0,0.957003479195758,0,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0,1.60515529459758,0.234264445725339,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.17472666824203,0,0,0,0,1.06687918137261,0,3.16373037092745,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67569440763353,0.229160424011684,0.717873024576814,1.79711100449092,2.14613024068285,1.56220020209311,0.134366944973453,0,0,0.236349546921671,0,0.0674035438541849,0,0,0,0.136203406111576,0,0,0.415440338029185,0.2249738915515,0,0,0,6.93490224232944,0.891727998294968,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9221734262185,0.314408610199332,1.65695622138878,0,0,0,0,0,0.2506898940227,0.306345576763462,0.983617892129413,0,0,0.122026264901963,0,1.14681839138014,0.110929051536852,0,1.24513771442608,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,1.07140367175657,0.336283722218824,1.82089681270989,0.682986574053893,0.354809480650555,0,0.171488009437418,0.0679697329768317,0,0,0,0.39246546425257,0,0,0,0,0,1.07214816264985,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.335566295393377,0,0,0.647428837187895,0.410651227424988,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0.490296643507811,0,0.196308467114945,0,0,0,0.187967835959707,0.45120521581504,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0.606229585745915,0,0,0,0.426467963801962,0.23806443146374,0,0.186224142887574,0.112131862580613,3.81882949668989,2.82964064541507,0.435433495793923,0.684466602170562,0,0.717222053926764,0,0,0,0,0,0,0,0,2.66302709674205,0.603821380773079,0 | |||
|short_description=p@chr5:150407695..150407704,+ | |||
}} |
Revision as of 08:25, 22 January 2014
Short description: | p@chr5:150407695..150407704, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:150407695..150407704, + |
Coexpression cluster: | C331_kidney_thyroid_breast_Adipocyte_adipose_retina_vagina |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 3.54e-10 | 9 |
epithelial cell of lower respiratory tract | 3.54e-10 | 9 |
adipocyte of omentum tissue | 5.50e-09 | 3 |
bronchial epithelial cell | 1.28e-08 | 3 |
duct epithelial cell | 2.91e-08 | 3 |
branched duct epithelial cell | 2.91e-08 | 3 |
tracheal epithelial cell | 2.91e-08 | 3 |
tracheoblast | 2.91e-08 | 3 |
perirenal adipocyte cell | 2.22e-07 | 1 |
respiratory epithelial cell | 4.52e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.71e-12 | 114 |
thoracic segment of trunk | 7.72e-11 | 52 |
thoracic segment organ | 6.33e-09 | 35 |
lower respiratory tract epithelium | 1.28e-08 | 3 |
epithelium of bronchus | 1.28e-08 | 3 |
subdivision of trunk | 3.73e-08 | 112 |
thoracic cavity element | 4.02e-07 | 34 |
thoracic cavity | 4.02e-07 | 34 |
vagina | 4.25e-07 | 1 |
mitral valve | 7.57e-07 | 1 |
lower lobe of right lung | 8.02e-07 | 1 |
right lung lobe | 8.02e-07 | 1 |
lower lobe of lung | 8.02e-07 | 1 |
lobe of lung | 8.02e-07 | 1 |
right lung | 8.02e-07 | 1 |
chest muscle | 8.98e-07 | 1 |
respiratory system muscle | 8.98e-07 | 1 |
skeletal muscle of trunk | 8.98e-07 | 1 |
respiratory system skeletal muscle | 8.98e-07 | 1 |
thoracic segment muscle | 8.98e-07 | 1 |
chest organ | 8.98e-07 | 1 |
muscle of trunk | 8.98e-07 | 1 |
diaphragm | 8.98e-07 | 1 |
future diaphragm | 8.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.64e-12 | 2 |
vascular disease | 6.76e-07 | 1 |
ischemia | 6.76e-07 | 1 |
extrinsic cardiomyopathy | 6.76e-07 | 1 |
myocardial ischemia | 6.76e-07 | 1 |
myocardial infarction | 6.76e-07 | 1 |