FFCP PHASE1:Hg19::chr5:150020298..150020307,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11346 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30672 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=58bp_to_ENST00000519664_5end | |||
|description=CAGE_peak_10_at_SYNPO_5end | |||
|id=chr5:150020298..150020307,+ | |||
|ontology_enrichment_celltype=CL:0000222!4.64e-17!119;CL:0000359!1.89e-15!32;CL:0000192!4.08e-12!42;CL:0000514!4.08e-12!42;CL:0000055!3.45e-11!180;CL:0000220!4.42e-11!246;CL:0002321!1.20e-10!248;CL:0000187!6.48e-10!54;CL:0000183!1.36e-09!59;CL:0000680!2.50e-09!57;CL:0000056!2.50e-09!57;CL:0000355!2.50e-09!57;CL:0002139!4.17e-09!24;CL:0000213!7.04e-08!57;CL:0000215!7.04e-08!57;CL:0000393!1.05e-07!60;CL:0000211!1.05e-07!60;CL:0000071!4.99e-07!18;CL:0002546!4.99e-07!18;CL:0002494!8.15e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.35e-22;32!CL:0000192;5.05e-12;43!CL:0002539;4.16e-10;10!CL:0002595;9.51e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.76e-23,32;CL:0000192,7.24e-16,43;CL:0000514,7.24e-16,43;CL:0000222,1.04e-15,121;CL:0000187,2.08e-12,55;CL:0000680,3.44e-12,58;CL:0000056,3.44e-12,58;CL:0000355,3.44e-12,58;CL:0000393,2.79e-10,61;CL:0000211,2.79e-10,61;CL:0002539,3.32e-10,10;CL:0002321,3.10e-08,250;CL:0002595,9.95e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000514;5.05e-12;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!5.78e-28!69;UBERON:0002049!3.66e-27!79;UBERON:0007798!3.66e-27!79;UBERON:0004872!1.47e-26!84;UBERON:0001981!3.13e-25!60;UBERON:0007500!3.13e-25!60;UBERON:0004537!3.13e-25!60;UBERON:0006965!3.13e-25!60;UBERON:0000477!2.83e-24!286;UBERON:0001009!8.12e-24!113;UBERON:0004111!1.29e-22!241;UBERON:0001637!3.27e-22!42;UBERON:0003509!3.27e-22!42;UBERON:0004572!3.27e-22!42;UBERON:0004535!3.74e-22!110;UBERON:0003914!1.28e-21!118;UBERON:0000025!4.29e-20!194;UBERON:0004573!2.81e-16!33;UBERON:0004571!2.81e-16!33;UBERON:0000119!3.48e-16!312;UBERON:0000483!1.17e-15!309;UBERON:0000467!7.37e-12!625;UBERON:0000480!1.11e-11!626;UBERON:0007100!1.43e-11!27;UBERON:0000481!1.76e-11!347;UBERON:0000490!2.74e-11!138;UBERON:0000468!9.14e-11!659;UBERON:0000948!8.52e-10!24;UBERON:0005498!8.52e-10!24;UBERON:0004140!8.52e-10!24;UBERON:0009881!8.52e-10!24;UBERON:0004141!8.52e-10!24;UBERON:0003084!8.52e-10!24;UBERON:0007005!8.52e-10!24;UBERON:0004139!8.52e-10!24;UBERON:0004291!8.52e-10!24;UBERON:0000475!3.05e-09!365;UBERON:0000947!6.01e-09!21;UBERON:0010191!6.01e-09!21;UBERON:0002385!2.93e-08!63;UBERON:0001015!2.93e-08!63;UBERON:0000383!2.93e-08!63;UBERON:0001134!2.99e-08!61;UBERON:0002036!2.99e-08!61;UBERON:0003082!2.99e-08!61;UBERON:0001986!4.99e-07!18;UBERON:0004638!4.99e-07!18;UBERON:0004852!4.99e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.62e-21;42!UBERON:0003509;1.62e-21;42!UBERON:0004572;1.62e-21;42!UBERON:0004573;1.68e-18;33!UBERON:0004571;1.68e-18;33!UBERON:0007500;5.07e-14;56!UBERON:0001981;5.07e-14;56!UBERON:0004537;5.07e-14;56!UBERON:0000055;6.36e-13;65!UBERON:0007100;1.20e-10;25!UBERON:0002049;3.01e-10;75!UBERON:0007798;3.01e-10;75!UBERON:0004237;4.16e-10;10!UBERON:0004695;4.16e-10;10!UBERON:0002111;4.16e-10;10!UBERON:0004178;4.16e-10;10!UBERON:0000947;8.45e-09;21!UBERON:0010191;8.45e-09;21!UBERON:0000948;4.80e-08;22!UBERON:0003914;5.09e-08;74!UBERON:0003834;9.51e-08;5!UBERON:0001533;9.51e-08;5!UBERON:0001869;1.93e-07;32!UBERON:0001893;4.72e-07;34!UBERON:0003513;5.78e-07;7!UBERON:0002791;6.45e-07;32!UBERON:0002619;6.74e-07;22!UBERON:0001950;8.50e-07;20 | |||
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| |||
|short_description=p10@SYNPO | |||
}} |
Revision as of 08:22, 22 January 2014
Short description: | p10@SYNPO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SYNPO_5end |
Coexpression cluster: | NA |
Association with transcript: | 58bp_to_ENST00000519664_5end |
EntrezGene: | SYNPO |
HGNC: | 30672 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.76e-23 | 32 |
smooth muscle cell | 7.24e-16 | 43 |
smooth muscle myoblast | 7.24e-16 | 43 |
mesodermal cell | 1.04e-15 | 121 |
muscle cell | 2.08e-12 | 55 |
muscle precursor cell | 3.44e-12 | 58 |
myoblast | 3.44e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.44e-12 | 58 |
electrically responsive cell | 2.79e-10 | 61 |
electrically active cell | 2.79e-10 | 61 |
aortic smooth muscle cell | 3.32e-10 | 10 |
embryonic cell | 3.10e-08 | 250 |
smooth muscle cell of the subclavian artery | 9.95e-08 | 5 |