FFCP PHASE1:Hg19::chr5:146889496..146889529,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3015 | |||
|TSSclassifier=strong | |||
|UniProt=Q6DEN2 | |||
|association_with_transcript=-72bp_to_uc003loo.2_5end | |||
|coexpression_cluster_id=C1527 | |||
|description=CAGE_peak_2_at_DPYSL3_5end | |||
|id=chr5:146889496..146889529,- | |||
|ontology_enrichment_celltype=CL:0000055!3.71e-34!180;CL:0000393!1.48e-15!60;CL:0000211!1.48e-15!60;CL:0000222!4.00e-15!119;CL:0000183!7.25e-14!59;CL:0000359!7.82e-14!32;CL:0000192!1.07e-13!42;CL:0000514!1.07e-13!42;CL:0000187!1.62e-13!54;CL:0000057!3.03e-13!75;CL:0002321!9.16e-13!248;CL:0000680!1.28e-12!57;CL:0000056!1.28e-12!57;CL:0000355!1.28e-12!57;CL:0000220!2.13e-12!246;CL:0002319!5.56e-10!25;CL:0000133!1.00e-09!59;CL:0000243!3.46e-07!15;CL:0000125!3.46e-07!15;CL:0000030!3.46e-07!15;CL:0000339!3.46e-07!15;CL:0002494!6.31e-07!16;CL:0000095!7.72e-07!17;CL:0000123!7.72e-07!17;CL:0000333!7.77e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.27e-13;32!CL:0000192;3.52e-10;43!CL:0002319;3.73e-10;25!CL:0000393;3.67e-08;61!CL:0000211;3.67e-08;61!CL:0000187;1.61e-07;55!CL:0000243;2.79e-07;15!CL:0000125;2.79e-07;15!CL:0002494;5.16e-07;16!CL:0000095;5.84e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.18e-15,61;CL:0000211,1.18e-15,61;CL:0000222,2.70e-15,121;CL:0000359,4.87e-14,32;CL:0000192,1.02e-13,43;CL:0000514,1.02e-13,43;CL:0000057,1.08e-13,76;CL:0000187,1.38e-13,55;CL:0000680,1.07e-12,58;CL:0000056,1.07e-12,58;CL:0000355,1.07e-12,58;CL:0002321,2.49e-12,250;CL:0002319,4.02e-10,25;CL:0000133,1.74e-09,59;CL:0000243,2.79e-07,15;CL:0000125,2.79e-07,15;CL:0000030,2.79e-07,15;CL:0000339,2.79e-07,15;CL:0002494,5.12e-07,16;CL:0000095,6.29e-07,17;CL:0000123,6.29e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000514;3.52e-10;43!CL:0000339;2.79e-07;15!CL:0000355;4.62e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.19e-27!84;UBERON:0001981!1.02e-24!60;UBERON:0007500!1.02e-24!60;UBERON:0004537!1.02e-24!60;UBERON:0006965!1.02e-24!60;UBERON:0002049!4.11e-24!79;UBERON:0007798!4.11e-24!79;UBERON:0003914!1.38e-23!118;UBERON:0000483!1.49e-22!309;UBERON:0000119!1.59e-22!312;UBERON:0000025!5.10e-22!194;UBERON:0000477!6.23e-22!286;UBERON:0004111!1.16e-21!241;UBERON:0000055!1.32e-21!69;UBERON:0000468!1.09e-20!659;UBERON:0001637!3.22e-20!42;UBERON:0003509!3.22e-20!42;UBERON:0004572!3.22e-20!42;UBERON:0004535!3.13e-19!110;UBERON:0001009!5.13e-19!113;UBERON:0000475!2.74e-18!365;UBERON:0000467!1.40e-17!625;UBERON:0000481!1.47e-17!347;UBERON:0000480!2.83e-17!626;UBERON:0004573!2.84e-16!33;UBERON:0004571!2.84e-16!33;UBERON:0000922!7.44e-16!612;UBERON:0002050!6.96e-14!605;UBERON:0005423!6.96e-14!605;UBERON:0005256!7.27e-14!143;UBERON:0000914!9.68e-14!83;UBERON:0002329!9.68e-14!83;UBERON:0003077!9.68e-14!83;UBERON:0003059!9.68e-14!83;UBERON:0007282!9.68e-14!83;UBERON:0009618!9.68e-14!83;UBERON:0007285!9.68e-14!83;UBERON:0002385!1.01e-13!63;UBERON:0001015!1.01e-13!63;UBERON:0000383!1.01e-13!63;UBERON:0004290!1.30e-13!70;UBERON:0000923!1.66e-13!604;UBERON:0005291!1.66e-13!604;UBERON:0006598!1.66e-13!604;UBERON:0002532!1.66e-13!604;UBERON:0001134!3.06e-13!61;UBERON:0002036!3.06e-13!61;UBERON:0003082!3.06e-13!61;UBERON:0000490!4.36e-13!138;UBERON:0004121!8.67e-12!169;UBERON:0000486!3.15e-11!82;UBERON:0000924!3.94e-11!173;UBERON:0006601!3.94e-11!173;UBERON:0000947!7.40e-11!21;UBERON:0010191!7.40e-11!21;UBERON:0000948!1.02e-09!24;UBERON:0005498!1.02e-09!24;UBERON:0004140!1.02e-09!24;UBERON:0009881!1.02e-09!24;UBERON:0004141!1.02e-09!24;UBERON:0003084!1.02e-09!24;UBERON:0007005!1.02e-09!24;UBERON:0004139!1.02e-09!24;UBERON:0004291!1.02e-09!24;UBERON:0007100!4.41e-09!27;UBERON:0003103!8.38e-09!69;UBERON:0000064!1.89e-08!219;UBERON:0003075!2.04e-08!86;UBERON:0007284!2.04e-08!86;UBERON:0000073!2.53e-08!94;UBERON:0001016!2.53e-08!94;UBERON:0002100!2.58e-08!216;UBERON:0000033!3.66e-08!123;UBERON:0001017!7.78e-08!82;UBERON:0000153!9.30e-08!129;UBERON:0007811!9.30e-08!129;UBERON:0005743!9.54e-08!86;UBERON:0002346!1.22e-07!90;UBERON:0003104!2.52e-07!238;UBERON:0009142!2.52e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.98e-15;33!UBERON:0004571;3.98e-15;33!UBERON:0001637;5.17e-15;42!UBERON:0003509;5.17e-15;42!UBERON:0004572;5.17e-15;42!UBERON:0007500;6.85e-13;56!UBERON:0001981;6.85e-13;56!UBERON:0004537;6.85e-13;56!UBERON:0000947;5.63e-11;21!UBERON:0010191;5.63e-11;21!UBERON:0003914;3.25e-10;74!UBERON:0000055;8.92e-10;65!UBERON:0002049;4.75e-09;75!UBERON:0007798;4.75e-09;75!UBERON:0000948;8.54e-09;22!UBERON:0007100;3.75e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,7.26e-28,83;UBERON:0007500,7.51e-25,59;UBERON:0001981,7.51e-25,59;UBERON:0004537,7.51e-25,59;UBERON:0006965,7.51e-25,59;UBERON:0003914,3.32e-24,117;UBERON:0002049,6.32e-24,78;UBERON:0007798,6.32e-24,78;UBERON:0000483,6.98e-22,306;UBERON:0000119,7.46e-22,309;UBERON:0000025,9.18e-22,192;UBERON:0000055,1.96e-21,68;UBERON:0004111,4.81e-21,240;UBERON:0001637,1.57e-20,42;UBERON:0003509,1.57e-20,42;UBERON:0004572,1.57e-20,42;UBERON:0004535,4.72e-19,109;UBERON:0001009,7.71e-19,112;UBERON:0004573,1.61e-16,33;UBERON:0004571,1.61e-16,33;UBERON:0007503,2.59e-15,78;UBERON:0010314,7.25e-15,132;UBERON:0000922,2.79e-14,592;UBERON:0007524,5.78e-14,73;UBERON:0000490,7.77e-14,148;UBERON:0002385,8.06e-14,64;UBERON:0001015,8.06e-14,64;UBERON:0000383,8.06e-14,64;UBERON:0002329,9.98e-14,71;UBERON:0003059,9.98e-14,71;UBERON:0007282,9.98e-14,71;UBERON:0004290,9.98e-14,71;UBERON:0009618,9.98e-14,71;UBERON:0003077,1.05e-13,72;UBERON:0007285,1.05e-13,72;UBERON:0001134,2.48e-13,62;UBERON:0002036,2.48e-13,62;UBERON:0003082,2.48e-13,62;UBERON:0003104,3.22e-13,160;UBERON:0009142,3.22e-13,160;UBERON:0005256,3.89e-13,122;UBERON:0002050,8.68e-13,564;UBERON:0000923,1.04e-12,560;UBERON:0010316,1.04e-12,560;UBERON:0005291,1.04e-12,560;UBERON:0006598,1.04e-12,560;UBERON:0010317,1.04e-12,560;UBERON:0002532,1.04e-12,560;UBERON:0005423,1.06e-12,581;UBERON:0000486,3.28e-11,83;UBERON:0000947,5.17e-11,21;UBERON:0010191,5.17e-11,21;UBERON:0004121,1.63e-10,171;UBERON:0000924,1.63e-10,171;UBERON:0006601,1.63e-10,171;UBERON:0000948,7.47e-10,24;UBERON:0005498,7.47e-10,24;UBERON:0004140,7.47e-10,24;UBERON:0009881,7.47e-10,24;UBERON:0004141,7.47e-10,24;UBERON:0003084,7.47e-10,24;UBERON:0007005,7.47e-10,24;UBERON:0004139,7.47e-10,24;UBERON:0004291,7.47e-10,24;UBERON:0007100,3.30e-09,27;UBERON:0003103,6.38e-09,68;UBERON:0003075,1.33e-08,82;UBERON:0007284,1.33e-08,82;UBERON:0001016,2.41e-08,89;UBERON:0001017,9.14e-08,81;UBERON:0002346,1.70e-07,86;UBERON:0002100,4.86e-07,199 | |||
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| |||
|short_description=p2@DPYSL3 | |||
}} |
Revision as of 08:08, 22 January 2014
Short description: | p2@DPYSL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DPYSL3_5end |
Coexpression cluster: | C1527_glioblastoma_Lens_mesothelioma_mesenchymal_granulosa_Ciliary_Smooth |
Association with transcript: | -72bp_to_uc003loo.2_5end |
EntrezGene: | DPYSL3 |
HGNC: | 3015 |
UniProt: | Q6DEN2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.18e-15 | 61 |
electrically active cell | 1.18e-15 | 61 |
mesodermal cell | 2.70e-15 | 121 |
vascular associated smooth muscle cell | 4.87e-14 | 32 |
smooth muscle cell | 1.02e-13 | 43 |
smooth muscle myoblast | 1.02e-13 | 43 |
fibroblast | 1.08e-13 | 76 |
muscle cell | 1.38e-13 | 55 |
muscle precursor cell | 1.07e-12 | 58 |
myoblast | 1.07e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.07e-12 | 58 |
embryonic cell | 2.49e-12 | 250 |
neural cell | 4.02e-10 | 25 |
neurectodermal cell | 1.74e-09 | 59 |
glial cell (sensu Vertebrata) | 2.79e-07 | 15 |
glial cell | 2.79e-07 | 15 |
glioblast | 2.79e-07 | 15 |
glioblast (sensu Vertebrata) | 2.79e-07 | 15 |
cardiocyte | 5.12e-07 | 16 |
neuron associated cell | 6.29e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 6.29e-07 | 17 |