FFCP PHASE1:Hg19::chr5:145316260..145316273,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=153769 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26299 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000506591_5end | |||
|description=CAGE_peak_8_at_SH3RF2_5end | |||
|id=chr5:145316260..145316273,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.03e-23!254;CL:0002321!7.63e-12!248;CL:0000223!1.50e-11!59;CL:0000077!3.97e-11!19;CL:0000220!4.82e-11!246;CL:0002076!2.62e-09!43;CL:0000128!2.64e-07!7;CL:0000126!2.64e-07!7;CL:0000127!2.64e-07!7;CL:0002453!2.64e-07!7;CL:0000076!5.75e-07!62;CL:0000243!9.03e-07!15;CL:0000125!9.03e-07!15;CL:0000030!9.03e-07!15;CL:0000339!9.03e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000077;3.60e-16;19!CL:0002603;1.63e-09;3!CL:0000228;9.38e-08;1!CL:1001319;9.38e-08;1!CL:1000600;9.38e-08;1!CL:0002372;9.38e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.07e-16,19;CL:0002603,2.30e-09,3;CL:0000228,6.10e-08,1;CL:0002372,6.10e-08,1;CL:1001319,1.64e-07,1;CL:1000600,1.64e-07,1;CL:0000076,4.75e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.69e-08;1 | |||
|ontology_enrichment_disease=DOID:305!3.20e-15!106;DOID:0050687!1.37e-14!143;DOID:14566!6.59e-13!239;DOID:162!1.22e-12!235 | |||
|ontology_enrichment_disease_v019=DOID:4960;3.54e-08;1!DOID:0070004;3.54e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,3.10e-08,1;DOID:0070004,3.10e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;9.38e-08;1!UBERON:0001256;9.38e-08;1!UBERON:0001259;9.38e-08;1!UBERON:0003343;2.42e-07;4!UBERON:0004785;2.42e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.64e-07,1;UBERON:0001256,1.64e-07,1;UBERON:0001259,1.64e-07,1;UBERON:0003343,2.58e-07,4;UBERON:0004785,2.58e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0.487932798790507,1.10808952269109,1.22400414746552,0.940364164434263,0.286235987131057,0.684372125364421,0.376627918784408,0,0,0,0,0.383829398097213,0,0.919421224478927,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.283604451492204,1.33037638477538,0.702678285545008,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.794455084879313,0.573673241497627,0.354668382198357,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.538168907066586,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0.252433774244115,0,0.161646056818812,0,0,0,0.386521706326594,0.272746120590835,0,0.487894824518382,0.662648841607426,0.232387885739037,0,1.00928340350251,0.72995471815166,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.983907508344908,0,0.219500570817251,0,0,0,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0.0895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,1.29964888536674,0,0,0,0,0,1.42636905040718,0,0,0,0,0,1.07813787429759,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32945394550784,0.200506470303285,0,0,0,0,0.902399225814824,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0,0.082509499920588,0.574265537996172,0.650060246036521,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0,0.330569830721956,0.192190067365106,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.188287601553558,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.490080431962063,0,0,0.0711418433484141,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.748562161632879,0,0,0.557216921387392,1.42068073403207,0,0,0,0,0,0.111308705022906,1.31843099381408,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.41827123283581,0,0.227884111694002,0.23056390438806,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,0.326465616318295,0.848118428603645,0,0,0,0,1.18608451472249,0.370691816839509,0.522109747527277,0,0,0,0,0.19566461893209,0.728341138602278,0,0,0,0.063186579628488,0,0,0.664653872707185,0,0,0,0.284609546029793,0.832048038078832,0.520679215005393,0.195984794828755,0.870592065804026,0,0,0,0.219267951258557,0.656923656425674,0.0969890164884194,0,0,0.274083849293502,0,0,0.195551382734803,0.240476460754601,0.640358984218058,0,1.00863292007874,0,0,0.14405479798815,0,0,0.407712618220842,0.523014231561666,0.713987523454252,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,1.16495949527454,0.472699093843342,0.164831716762333,0.13480708770837,2.16540459332447,0,0,0,0.482259445395058,0.825236619583403,0.415440338029185,0,1.5476039091159,0,0,0,0,0.211200673038813,0,0.191915197319445,0,0,0,0,0.864221491201268,0,0,0,0,0.226624183040251,0,0,0,0.13223260174269,0.342173675768659,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.624902039810533,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0.761610424337591,0,0,0.107410557042488,0,0,0,0,0,0,0.963099152036517,3.00218227924896,2.08795433572169,0.226705925512272,1.85217979459067,0,0.179088841081487,0.308801447160972,0.657852148736121,0,2.12205442098006,1.8583668471838,0.256241518587947,1.38172136692479,0,0,0,0.132864840313363,0,0,0.491545817507439,0.211312123358627,0.39997479170986,0,2.75543967457305,0.567515953566836,0,0.279759015438889,0.622077260032973,0,0,2.20172318598255,0,0,0,1.73510069962603,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,1.27592034051333,1.29766695682514,0,0.115525666150338,0,0,0,0.0752103283492573,0.20170506870352,0,0,0.163771917510097,0.739280431085226,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0.863710364874486,0.47775168788705,0.0714765441766563,0,0.581207126840626,0,0,0.207216164163037,0.17071847709395,0,0.430227358820278,0.118332000730565,0,0,0.22910686854405,0,0,0,0,1.09726132484042,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0.157771562193185,0.0679914901909147,0,0,0,0.462175628631418,0,0.252332849670158,0.109265571963696,0.253397002022874,0.30596648922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| |||
|short_description=p8@SH3RF2 | |||
}} |
Revision as of 08:04, 22 January 2014
Short description: | p8@SH3RF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SH3RF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000506591_5end |
EntrezGene: | SH3RF2 |
HGNC: | 26299 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.07e-16 | 19 |
astrocyte of the cerebellum | 2.30e-09 | 3 |
multinucleate cell | 6.10e-08 | 1 |
myotube | 6.10e-08 | 1 |
bladder cell | 1.64e-07 | 1 |
lower urinary tract cell | 1.64e-07 | 1 |
squamous epithelial cell | 4.75e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.64e-07 | 1 |
wall of urinary bladder | 1.64e-07 | 1 |
mucosa of urinary bladder | 1.64e-07 | 1 |
mucosa of oral region | 2.58e-07 | 4 |
respiratory system mucosa | 2.58e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 3.10e-08 | 1 |
myeloma | 3.10e-08 | 1 |