FFCP PHASE1:Hg19::chr5:140013241..140013270,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=929 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1628 | |||
|TSSclassifier=strong | |||
|UniProt=E7EVL5 | |||
|association_with_transcript=0bp_to_ENST00000519715,uc003lgj.1_5end | |||
|coexpression_cluster_id=C294 | |||
|description=CAGE_peak_3_at_CD14_5end | |||
|id=chr5:140013241..140013270,- | |||
|ontology_enrichment_celltype=CL:0000766!3.21e-53!76;CL:0002057!3.78e-48!42;CL:0002194!9.58e-45!63;CL:0000576!9.58e-45!63;CL:0000040!9.58e-45!63;CL:0000559!9.58e-45!63;CL:0002009!2.86e-44!65;CL:0000860!9.15e-44!45;CL:0000557!6.72e-43!71;CL:0000839!2.37e-42!70;CL:0000763!1.18e-30!112;CL:0000049!1.18e-30!112;CL:0000738!8.40e-28!140;CL:0002087!5.13e-23!119;CL:0002031!3.10e-21!124;CL:0000037!7.37e-19!172;CL:0000566!7.37e-19!172;CL:0002032!4.63e-18!165;CL:0000837!4.63e-18!165;CL:0000988!1.50e-16!182;CL:0002393!1.50e-10!9;CL:0002397!1.50e-10!9;CL:0000094!2.39e-10!8;CL:0000081!6.44e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.64e-53;33!CL:0002057;6.64e-53;33!CL:0000473;7.21e-53;39!CL:0000234;7.21e-53;39!CL:0000576;2.14e-46;48!CL:0000766;5.21e-37;69!CL:0000763;1.16e-16;100!CL:0000094;1.22e-14;8!CL:0002087;1.54e-13;104!CL:0000235;7.56e-12;6!CL:0002393;2.20e-11;6!CL:0002397;2.20e-11;6!CL:0000738;2.73e-10;136!CL:0000081;3.57e-10;11!CL:0002619;1.67e-07;3!CL:0000775;6.32e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.14e-83,48;CL:0000234,2.14e-83,48;CL:0000766,1.63e-80,72;CL:0002194,1.24e-73,59;CL:0000576,1.24e-73,59;CL:0000040,1.24e-73,59;CL:0000559,1.24e-73,59;CL:0000860,1.47e-72,42;CL:0002057,1.47e-72,42;CL:0002009,1.05e-70,61;CL:0000839,3.68e-64,66;CL:0000557,5.74e-63,67;CL:0000763,1.17e-47,108;CL:0000049,1.17e-47,108;CL:0000738,1.52e-44,136;CL:0002087,1.23e-40,115;CL:0002031,1.49e-33,120;CL:0000037,2.39e-32,168;CL:0002032,1.17e-30,161;CL:0000837,1.17e-30,161;CL:0000988,1.00e-29,177;CL:0002393,3.30e-15,9;CL:0002397,3.30e-15,9;CL:0000094,6.68e-15,8;CL:0000235,8.93e-12,6;CL:0000081,2.35e-10,11;CL:0002619,1.66e-07,3;CL:0000775,6.28e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-51;42!CL:0000049;5.39e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.23e-48!115;UBERON:0002390!3.49e-46!102;UBERON:0003061!3.49e-46!102;UBERON:0002193!1.58e-42!112;UBERON:0002371!1.03e-35!80;UBERON:0001474!8.80e-32!86;UBERON:0002405!2.96e-26!115;UBERON:0004765!4.09e-26!101;UBERON:0001434!4.09e-26!101;UBERON:0003081!7.61e-18!216;UBERON:0002204!9.11e-13!167;UBERON:0001049!7.08e-12!57;UBERON:0005068!7.08e-12!57;UBERON:0006241!7.08e-12!57;UBERON:0007135!7.08e-12!57;UBERON:0000062!8.83e-11!511;UBERON:0000178!2.20e-10!15;UBERON:0000179!2.20e-10!15;UBERON:0000463!2.20e-10!15;UBERON:0002616!2.62e-09!59;UBERON:0000467!3.19e-09!625;UBERON:0000480!3.87e-09!626;UBERON:0001017!6.13e-09!82;UBERON:0005743!9.84e-09!86;UBERON:0000922!2.76e-08!612;UBERON:0000923!3.36e-08!604;UBERON:0005291!3.36e-08!604;UBERON:0006598!3.36e-08!604;UBERON:0002532!3.36e-08!604;UBERON:0002050!4.03e-08!605;UBERON:0005423!4.03e-08!605;UBERON:0000955!6.50e-08!69;UBERON:0006238!6.50e-08!69;UBERON:0003075!9.87e-08!86;UBERON:0007284!9.87e-08!86;UBERON:0000468!1.02e-07!659;UBERON:0002780!1.09e-07!41;UBERON:0001890!1.09e-07!41;UBERON:0006240!1.09e-07!41;UBERON:0000073!1.45e-07!94;UBERON:0001016!1.45e-07!94;UBERON:0002020!1.95e-07!34;UBERON:0003528!1.95e-07!34;UBERON:0001893!2.21e-07!34;UBERON:0003080!2.29e-07!42;UBERON:0002346!5.67e-07!90;UBERON:0002791!6.02e-07!33;UBERON:0000479!8.08e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.12e-15;15!UBERON:0000179;1.12e-15;15!UBERON:0000463;1.12e-15;15!UBERON:0002390;1.33e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.52e-67,98;UBERON:0003061,3.52e-67,98;UBERON:0002193,2.83e-61,108;UBERON:0002371,1.23e-53,76;UBERON:0001474,1.49e-48,82;UBERON:0002405,2.17e-46,93;UBERON:0004765,7.94e-43,90;UBERON:0001434,1.49e-38,100;UBERON:0003081,1.50e-28,203;UBERON:0007023,5.25e-19,114;UBERON:0002204,9.23e-18,167;UBERON:0000178,1.16e-15,15;UBERON:0000179,1.16e-15,15;UBERON:0000463,1.16e-15,15;UBERON:0000926,2.90e-15,315;UBERON:0004120,2.90e-15,315;UBERON:0006603,2.90e-15,315;UBERON:0000923,8.33e-09,560;UBERON:0010316,8.33e-09,560;UBERON:0005291,8.33e-09,560;UBERON:0006598,8.33e-09,560;UBERON:0010317,8.33e-09,560;UBERON:0002532,8.33e-09,560;UBERON:0002050,1.42e-08,564;UBERON:0005423,4.50e-08,581;UBERON:0000922,1.77e-07,592 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96682138424452,1.91914699048606,4.33485145285013,0,0,0,0,0,0,4.43196326825502,4.41197784434312,2.82114131930607,54.8592911887815,28.8265362756892,41.469666389104,11.6318591023652,6.04601509902095,4.12392904019288,21.383471395323,4.93401465626191,9.91060386864331,6.32923263108731,4.86705342405291,8.27687804610048,15.8583013138845,5.80936215225443,10.8341189275473,15.8123565215788,9.82462140208245,24.9443067734044,18.977201326996,12.1953030288916,15.344091019177,5.60747210317417,4.58766412529753,6.81959600852311,7.83564944297177,3.40431134814684,4.9825779919646,4.77372463987812,2.08593167368081,3.47502151528187,9.08099253950053,3.68277635987565,13.2914202725171,7.39393502091796,9.779797798392,13.8374706035528,28.7561295735027,33.0389164251314,16.2332842564051,2.56511469367124,1.39241674039363,1.64397738388171,0,0,0,1.70692089026603,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602300476311091,1.02389288923535,1.24930726552346,2.13099526839615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.0848667897701,34.9002237733493,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.9284455174288,1.17002132569619,3.56714789492948,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.9734695474738,22.6015691144457,27.4084121327941,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0.773288812777695,0,0,11.9841123831549,8.97484377612075,12.018049889645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,3.01999881146064,3.30855429190677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0.38126038784765,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,4.56702848308952,5.35246044999663,6.26611905891579,5.71756261098694,7.4045209155515,5.83625980073446,5.94034580961926,3.17250070517708,0,0,0,0,0,0,0,0,0.766021480529467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,0,1.1253553312841,0,0,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0.295930216910801,4.7896618469388,0,1.93866549219044,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0,1.32656082487949,0,0.221158519862449,0.886642856860642,0.219385397153973,0,0,0.384751292518985,0.113942055847001,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,1.7524294574976,1.60515529459758,0.937057782901357,0,0,0,0,0,0,3.47526187956684,0,0,0,0,0,0,0,0,0,0,0,1.92199335066233,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0.696418755514666,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,2.87501295673185,0,0,0,0.558564802544508,1.60412296808179,0,0.599037001496973,0.429226048136571,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,1.90684768556206,0,0,0,0.2249738915515,0,1.09349201984444,0,1.26089131678717,0.419636705079985,0,0,0,5.71756261098694,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0.517131825446202,2.24795422962573,0,0,0.961086713109252,0.157204305099666,1.65695622138878,2.97699613087171,0,0,0,0,0,0,0,0,0,0,1.001527445652,0.573409195690071,2.66229723688445,1.1177352529449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02766760154335,0,1.91560630868582,0.205116364240755,0.252071696221718,0.760729777106397,1.29180516505481,1.42769420259154,0,0,0,0,0,0,0,0.601682626794058,0,0,0,0,0,0.405225507710368,0,0.413373593002368,1.07806877329642,0,0,0.496211178389294,0,0,0,1.3451348888753,0,0,1.33053555243958,0,0,1.4953341254903,0.789273282754189,0,0,1.72684804271131,0.157115589916002,0,0,0,0,1.42953088353313,0,0,0,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0.615976841137482,0,0.971421986118279,0,0,0,0,0.109940516745429,0,0.771741581079447,0.437119121007915,0,0,0,0.981542335574726,2.37637120261669,0.8453114551668,0,1.50374268767766,1.22469987149797,0,0,0,0,0,0.458729283404541,1.86341458096887,0,1.01987235286372,0,0,0,0,0,0,0,0,0,0,0,0,1.28823786971007,0.535928260312357,0,2.0686599172379,0.426467963801962,0.23806443146374,0.193766729508018,0.558672428662721,0,0.190941474834495,0,0.435433495793923,0.342233301085281,0.80822463617505,0.215166616178029,0.332660356546013,0,0,0,0,0,1.1001729976458,0,0,1.20764276154616,0 | |||
|short_description=p3@CD14 | |||
}} |
Revision as of 07:50, 22 January 2014
Short description: | p3@CD14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CD14_5end |
Coexpression cluster: | C294_CD14_Macrophage_Monocytederived_CD14CD16_Neutrophils_Basophils_Peripheral |
Association with transcript: | 0bp_to_ENST00000519715, uc003lgj.1_5end |
EntrezGene: | CD14 |
HGNC: | 1628 |
UniProt: | E7EVL5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.14e-83 | 48 |
phagocyte | 2.14e-83 | 48 |
myeloid leukocyte | 1.63e-80 | 72 |
monopoietic cell | 1.24e-73 | 59 |
monocyte | 1.24e-73 | 59 |
monoblast | 1.24e-73 | 59 |
promonocyte | 1.24e-73 | 59 |
classical monocyte | 1.47e-72 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.47e-72 | 42 |
macrophage dendritic cell progenitor | 1.05e-70 | 61 |
myeloid lineage restricted progenitor cell | 3.68e-64 | 66 |
granulocyte monocyte progenitor cell | 5.74e-63 | 67 |
myeloid cell | 1.17e-47 | 108 |
common myeloid progenitor | 1.17e-47 | 108 |
leukocyte | 1.52e-44 | 136 |
nongranular leukocyte | 1.23e-40 | 115 |
hematopoietic lineage restricted progenitor cell | 1.49e-33 | 120 |
hematopoietic stem cell | 2.39e-32 | 168 |
hematopoietic oligopotent progenitor cell | 1.17e-30 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-30 | 161 |
hematopoietic cell | 1.00e-29 | 177 |
intermediate monocyte | 3.30e-15 | 9 |
CD14-positive, CD16-positive monocyte | 3.30e-15 | 9 |
granulocyte | 6.68e-15 | 8 |
macrophage | 8.93e-12 | 6 |
blood cell | 2.35e-10 | 11 |
adult endothelial progenitor cell | 1.66e-07 | 3 |
neutrophil | 6.28e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.52e-67 | 98 |
blood island | 3.52e-67 | 98 |
hemolymphoid system | 2.83e-61 | 108 |
bone marrow | 1.23e-53 | 76 |
bone element | 1.49e-48 | 82 |
immune system | 2.17e-46 | 93 |
skeletal element | 7.94e-43 | 90 |
skeletal system | 1.49e-38 | 100 |
lateral plate mesoderm | 1.50e-28 | 203 |
adult organism | 5.25e-19 | 114 |
musculoskeletal system | 9.23e-18 | 167 |
blood | 1.16e-15 | 15 |
haemolymphatic fluid | 1.16e-15 | 15 |
organism substance | 1.16e-15 | 15 |
mesoderm | 2.90e-15 | 315 |
mesoderm-derived structure | 2.90e-15 | 315 |
presumptive mesoderm | 2.90e-15 | 315 |
germ layer | 8.33e-09 | 560 |
germ layer / neural crest | 8.33e-09 | 560 |
embryonic tissue | 8.33e-09 | 560 |
presumptive structure | 8.33e-09 | 560 |
germ layer / neural crest derived structure | 8.33e-09 | 560 |
epiblast (generic) | 8.33e-09 | 560 |
embryonic structure | 1.42e-08 | 564 |
developing anatomical structure | 4.50e-08 | 581 |
embryo | 1.77e-07 | 592 |