FFCP PHASE1:Hg19::chr5:138941127..138941141,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7322 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12475 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-167bp_to_ENST00000510470_5end | |||
|description=CAGE_peak_4_at_UBE2D2_5end | |||
|id=chr5:138941127..138941141,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.04e-17!119;CL:0000542!9.21e-16!53;CL:0000051!9.21e-16!53;CL:0000738!1.07e-15!140;CL:0000037!1.31e-15!172;CL:0000566!1.31e-15!172;CL:0000988!1.38e-15!182;CL:0000838!2.80e-15!52;CL:0002031!3.54e-15!124;CL:0002032!2.00e-14!165;CL:0000837!2.00e-14!165;CL:0000084!3.67e-08!25;CL:0000827!3.67e-08!25;CL:0000945!1.81e-07!24;CL:0000826!1.81e-07!24;CL:0000791!6.27e-07!18;CL:0000789!6.27e-07!18;CL:0002420!6.27e-07!18;CL:0002419!6.27e-07!18;CL:0000790!6.27e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.05e-09;53!CL:0000084;5.08e-08;25!CL:0000945;1.82e-07;24!CL:0000791;9.07e-07;18!CL:0000789;9.07e-07;18!CL:0002419;9.07e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,5.62e-17,115;CL:0000542,9.10e-16,53;CL:0000051,9.10e-16,53;CL:0000838,2.77e-15,52;CL:0000738,5.11e-15,136;CL:0000037,6.30e-15,168;CL:0000988,6.71e-15,177;CL:0002031,1.80e-14,120;CL:0002032,9.26e-14,161;CL:0000837,9.26e-14,161;CL:0000084,3.65e-08,25;CL:0000827,3.65e-08,25;CL:0000945,1.80e-07,24;CL:0000826,1.80e-07,24;CL:0000791,6.24e-07,18;CL:0000789,6.24e-07,18;CL:0002420,6.24e-07,18;CL:0002419,6.24e-07,18;CL:0000790,6.24e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;1.05e-09;53!CL:0000790;9.07e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=2.36181893051724,2.99740733447376,1.26858963686374,2.00146596706261,3.5756887554183,3.48935409640147,5.06599756336621,1.26343974685366,3.91778442299758,2.94880723801811,5.58240934377942,3.05817920982241,3.4289707169699,1.60896258848061,1.98838425436749,1.34465029290355,1.80808358407193,4.38186054232424,4.87932798790507,1.84681587115182,2.65200898617529,5.95563970808367,2.57612388417951,2.87436292653057,4.01736446703369,7.64134057479513,8.6205618922443,7.79236735005425,3.93364276848904,1.15148819429164,4.18003532953405,1.83884244895785,0.6024118375565,1.47901604066715,9.29606406963619,3.69640004467296,1.46800219667424,4.9859586767869,6.01633342410425,5.4252717678963,1.79132379391939,2.26725566213286,2.06060454107349,6.10672602874172,3.02300754951048,6.54976965207104,8.59987436551033,7.40102198439286,4.33588919253145,7.19230980805376,4.09857130446561,2.36482229888585,3.7922024881028,1.93645405075148,1.35426486594342,6.58848188399116,4.36649840092553,3.14612878223118,8.26426509401437,3.85114832491312,6.39337125799041,7.58657990429447,5.58498241340569,5.96714650745772,6.67481248845743,7.94339314567596,4.35975574296902,4.52247597462138,6.77927793946262,3.69221035998698,4.84319602106695,4.78760926783834,4.43047342417238,1.26753171787165,2.12604299965044,2.09658645508376,2.2465726229299,2.10247649978109,2.08943262706204,2.28010194992999,1.39241674039363,1.82664153764634,8.79981222306614,6.55366333514558,1.77901850772711,5.54749289336459,4.40435585739614,8.04653415936277,9.25462821898807,5.72432252721218,7.96898156753228,4.11066032559657,6.88091810625412,3.96513985737078,2.80254281490768,2.63384084775077,4.72103448273199,9.43225830597995,6.16804496998528,4.34684888015763,7.17028986593899,10.4158517261641,5.84480185223734,5.57052284425868,7.9543595018206,7.08908462667588,5.41607727530031,9.47875765969996,8.19373889627233,7.5641436117691,5.52700035571697,3.76744011455568,7.26604159494096,4.0131124213457,7.31748666634838,4.53237370790265,5.74830740402882,8.24705869158312,3.79529538029254,4.45991580053735,5.20866763085135,3.8018081777935,3.01150238155546,2.8157054453972,3.74792179657038,4.49876778883632,4.92676798152628,7.66105624253983,6.68600489458768,8.83428863685074,2.43806866313962,1.34140171940727,1.15076305659177,1.44575660953827,2.50668955317945,3.91085601194224,2.3858578411533,2.91980922181582,1.41802225746102,2.66075276955077,2.98638271356629,2.88153966094968,4.73583874780305,2.22470665670658,1.9472843619281,1.74129737299267,3.72282289452822,11.9245312152671,8.00792875092179,6.3147775226026,2.38514888840046,4.30117297553062,3.12426451446835,4.52246353539208,6.71199097935849,5.77747888074142,3.76190939766259,1.29208379584664,1.77883131343355,3.3472061276467,1.61131726843659,4.56163263431108,5.36936526605973,1.47065232138347,4.0507097394088,2.14319347881791,6.28682243353275,4.27923625836624,6.13266549863533,1.89853131913626,7.5112715011467,2.63560834872127,3.87780264148325,2.18047026071267,2.98183171017191,1.77282716330412,1.32409180813219,1.14734648299525,3.19201543978521,3.92474320099615,2.1349799145941,4.44001587150888,2.48968828319813,3.09834545760283,2.28846664358842,1.36221684880438,1.15235184896,5.38939293217732,1.5608003841516,1.71141546463335,1.79338416662161,1.29177948508141,1.45685649931318,2.38766371393822,2.04154171254893,1.96534907698829,3.51307655997603,1.18800285728205,3.21447008062124,0,5.03032699271367,2.18836948140286,1.50142223846357,1.10825646193673,2.63386572528503,5.51678032438235,4.5071417671979,3.40296549480063,0.717558542755448,2.56268866582281,1.05965950579781,0.300091096084402,0.721367704669072,0.257640540045629,2.41951913231067,0.506328996723799,2.04617710838517,0.757301322732344,2.39329736469978,0.646584227275248,1.77504796258307,1.20902517873168,3.05209066158878,3.67195621010264,3.81844568827169,4.01526433544605,1.46368447355514,2.12047629314376,1.97529702878181,1.7622379352613,2.77552935963191,3.28479623168247,0,3.85944562915731,1.38134921352481,0.464367928031979,1.44375896333917,2.24782920075703,2.36018566109342,2.16909926895134,3.19852520923942,3.26819166138609,1.18635309555548,2.42696354688296,3.13954344200554,1.92373578473195,2.95262181849859,5.60967095213783,1.6462960453256,2.94017422771084,0,3.9313088667105,1.77236972004421,3.97316789473185,2.09080345523293,1.88724591328378,1.31700342490351,3.37205259772859,2.81481122752566,1.11106134190236,3.25808305310325,4.15973914111831,1.44331342025273,1.97081688457631,1.76113041353732,2.45422961193825,4.1668696131895,2.66355813128438,2.37061319387782,1.71697232418975,1.96973604869918,2.10603838625314,3.12125440806329,5.62403003920662,2.68771405118175,3.68615252830205,4.03013352162817,3.77824120068151,3.83382679165211,1.97065295158377,5.54705134283324,1.86595303986695,2.01767934783746,1.8936365013957,3.55588208036147,8.02175693672383,4.68869788840188,5.13217338068116,2.15937734676979,5.40617504119051,2.00078502841405,1.23344192779897,2.61576041299968,2.86019314701705,1.80980402060889,3.57656445851882,3.381211010224,1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| |||
|short_description=p4@UBE2D2 | |||
}} |
Revision as of 07:45, 22 January 2014
Short description: | p4@UBE2D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_UBE2D2_5end |
Coexpression cluster: | NA |
Association with transcript: | -167bp_to_ENST00000510470_5end |
EntrezGene: | UBE2D2 |
HGNC: | 12475 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 5.62e-17 | 115 |
lymphocyte | 9.10e-16 | 53 |
common lymphoid progenitor | 9.10e-16 | 53 |
lymphoid lineage restricted progenitor cell | 2.77e-15 | 52 |
leukocyte | 5.11e-15 | 136 |
hematopoietic stem cell | 6.30e-15 | 168 |
hematopoietic cell | 6.71e-15 | 177 |
hematopoietic lineage restricted progenitor cell | 1.80e-14 | 120 |
hematopoietic oligopotent progenitor cell | 9.26e-14 | 161 |
hematopoietic multipotent progenitor cell | 9.26e-14 | 161 |
T cell | 3.65e-08 | 25 |
pro-T cell | 3.65e-08 | 25 |
lymphocyte of B lineage | 1.80e-07 | 24 |
pro-B cell | 1.80e-07 | 24 |
mature alpha-beta T cell | 6.24e-07 | 18 |
alpha-beta T cell | 6.24e-07 | 18 |
immature T cell | 6.24e-07 | 18 |
mature T cell | 6.24e-07 | 18 |
immature alpha-beta T cell | 6.24e-07 | 18 |