FFCP PHASE1:Hg19::chr5:138727583..138727604,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:138727583..138727604,+ | |||
|id=chr5:138727583..138727604,+ | |||
|ontology_enrichment_celltype=CL:0002368!6.87e-10!13;CL:0000066!1.38e-09!254;CL:0002077!5.74e-08!33;CL:0002076!2.77e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002328;1.95e-10;3!CL:0000346;4.30e-10;3!CL:1000428;4.30e-10;3!CL:0002368;6.37e-09;13!CL:0002379;1.41e-08;1!CL:0002252;3.44e-08;1!CL:0000244;8.81e-08;4!CL:0000731;8.81e-08;4!CL:0002202;1.48e-07;9!CL:0002632;1.48e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.62e-10,3;CL:0000346,3.42e-10,3;CL:1000428,3.42e-10,3;CL:0002368,7.23e-09,13;CL:0002379,1.41e-08,1;CL:0002252,4.11e-08,1;CL:0000244,7.70e-08,4;CL:0000731,7.70e-08,4;CL:0002202,1.68e-07,9;CL:0002632,1.68e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060058!6.60e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:3620;1.41e-08;1!DOID:3565;1.41e-08;1!DOID:630;3.44e-08;1!DOID:0050177;3.44e-08;1!DOID:6193;3.44e-08;1!DOID:0050427;3.44e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.41e-08,1;DOID:3565,1.41e-08,1;DOID:6193,3.57e-08,1;DOID:630,5.07e-08,1;DOID:0050177,5.07e-08,1;DOID:0050427,5.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.80e-11!169;UBERON:0000925!1.80e-11!169;UBERON:0006595!1.80e-11!169;UBERON:0001007!2.77e-08!155;UBERON:0001555!2.77e-08!155;UBERON:0007026!2.77e-08!155;UBERON:0000077!1.95e-07!130;UBERON:0002075!3.21e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.61e-15;2!UBERON:0005058;4.61e-15;2!UBERON:0009113;4.61e-15;2!UBERON:0004815;1.95e-10;3!UBERON:0002031;1.95e-10;3!UBERON:0000412;4.30e-10;3!UBERON:0001992;4.30e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.62e-10,3;UBERON:0002031,1.62e-10,3;UBERON:0000412,3.42e-10,3;UBERON:0001992,3.42e-10,3;UBERON:0002370,4.12e-08,4;UBERON:0005058,4.12e-08,4;UBERON:0009113,4.12e-08,4;UBERON:0003295,4.12e-08,4;UBERON:0005562,4.12e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.873765488520689,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,1.29902789771517,0.821005894499457,1.41679406364623,0,0,0,4.59710612239464,1.50602959389125,0.369754010166788,0.542270404062111,0.426507697462265,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.650296737799391,0.493313713811028,1.10540007114339,0,0,0,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0.174129737299267,0.26591592103773,0.476981248610684,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421352420106746,0,0.122834317311768,0,0,0,0,0,0.505008341862199,0,0,0,0.612975591598039,0,0,0.717558542755448,0,0,0,0,0,0,0.506328996723799,0.0974370051611986,0.504867548488229,0,0,0.355009592516614,0.201504196455281,0.339121184620975,0.773043412653187,0.272746120590835,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,0,0,0,0.337169380156203,0,0.441175890929576,0.435758888184812,0,0.404493924480493,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0.548751427043128,2.24803506515239,0.603173834469785,0.277765335475589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.00789276919316,0.425325291727159,0,0,0,0,0,0,0,0,0,0.763976851116555,0,1.71072446022705,0.719792448923265,1.50171528921959,0.285826432630578,0,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.713715955188647,0.315404830067869,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0,0,0.200506470303285,0.184161977871793,0,0.182091168006717,0,0.451199612907412,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0,0,0,0,0.096670718292122,0,0.460511024178389,0.275673144969061,0,0.145016693914229,0,0,0.495854746082934,0.768760269460425,4.46644493731044,0.30347334256665,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,1.56989728039846,0,0,0.117812402345686,0,0,0,0.48763373908959,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.288666338176536,0.670302275535787,1.08890984861323,0,1.29151611801369,1.68471475667626,0,0.459446800413919,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0.557409525377156,0.577076851905779,0.213425530045242,0.159426272728822,0,0,0,0.324621940274555,0,1.59764275323235,0,0,0,0.642352300414798,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12041475976939,0,0,0,0,0,0,0.111308705022906,0.329607748453519,0,0,0.828851746593443,0,0,0.492339221844278,0,0.988551862620595,0,0,0,0,0,0,0,0,0,0.349839999984783,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0.364909578431332,0.19566461893209,0.242780379534093,0,0,0,0,0,0,0.664653872707185,0.992975867626496,0.941798755221676,3.58417289318877,0,0,0,0.391969589657511,0.783532859223623,0,1.37588825977293,0.774050650312681,1.31560770755134,1.14961639874493,0,0,0,0,0.19871461170299,0,0.391102765469606,0.160317640503067,0,0.39961921916426,0,0,0,0,0.49701014226173,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76205998859206,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11739237728355,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0.782982875895635,0.226705925512272,1.62065732026684,0.244736704506468,0,0.308801447160972,0,0.706756583783524,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0.861074898304078,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.550285795565037,0.577628330751691,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345701962667338,0,0,0,0.236387681767936,0.889851215136553,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,0.0999411559249289,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,2.00225620491619,1.86224142887574,0.560659312903067,0,0,0.435433495793923,0,0.202056159043763,0,0,0.488419611665847,0.213454691755431,0,0.179650404213174,0,0,0,0,0,1.28227396921293 | |||
|short_description=p@chr5:138727583..138727604,+ | |||
}} |
Revision as of 07:44, 22 January 2014
Short description: | p@chr5:138727583..138727604, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:138727583..138727604, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.62e-10 | 3 |
hair follicle dermal papilla cell | 3.42e-10 | 3 |
stem cell of epidermis | 3.42e-10 | 3 |
respiratory epithelial cell | 7.23e-09 | 13 |
meningothelial cell | 1.41e-08 | 1 |
epithelial cell of esophagus | 4.11e-08 | 1 |
transitional epithelial cell | 7.70e-08 | 4 |
urothelial cell | 7.70e-08 | 4 |
epithelial cell of tracheobronchial tree | 1.68e-07 | 9 |
epithelial cell of lower respiratory tract | 1.68e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.62e-10 | 3 |
epithelium of bronchus | 1.62e-10 | 3 |
dermal papilla | 3.42e-10 | 3 |
papillary layer of dermis | 3.42e-10 | 3 |
thymus | 4.12e-08 | 4 |
hemolymphoid system gland | 4.12e-08 | 4 |
thymic region | 4.12e-08 | 4 |
pharyngeal gland | 4.12e-08 | 4 |
thymus primordium | 4.12e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.41e-08 | 1 |
meningioma | 1.41e-08 | 1 |
epithelioid sarcoma | 3.57e-08 | 1 |
genetic disease | 5.07e-08 | 1 |
monogenic disease | 5.07e-08 | 1 |
xeroderma pigmentosum | 5.07e-08 | 1 |