FFCP PHASE1:Hg19::chr5:98264490..98264505,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4535 | |||
|description=CAGE_peak_at_chr5:98264490..98264505,- | |||
|id=chr5:98264490..98264505,- | |||
|ontology_enrichment_celltype=CL:0000037!3.08e-20!172;CL:0000566!3.08e-20!172;CL:0000988!4.26e-19!182;CL:0002032!4.63e-17!165;CL:0000837!4.63e-17!165;CL:0000738!1.03e-16!140;CL:0002031!1.16e-12!124;CL:0002087!3.82e-12!119;CL:0000763!7.90e-10!112;CL:0000049!7.90e-10!112;CL:0000860!1.89e-08!45;CL:0002057!2.85e-08!42;CL:0000838!3.61e-08!52;CL:0000542!1.04e-07!53;CL:0000051!1.04e-07!53;CL:0000766!1.21e-07!76;CL:0000094!6.95e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;4.50e-17;8!CL:0000081;3.17e-15;11!CL:0000624;1.51e-13;6!CL:0000084;4.98e-10;25!CL:0000791;7.55e-09;18!CL:0000789;7.55e-09;18!CL:0002419;7.55e-09;18!CL:0000623;8.12e-08;3!CL:0000226;8.58e-08;3!CL:0000775;8.58e-08;3!CL:0000842;8.58e-08;3!CL:0000898;2.96e-07;3!CL:0000767;9.51e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.11e-22,177;CL:0000037,9.95e-21,168;CL:0000738,4.56e-19,136;CL:0000094,2.78e-17,8;CL:0000081,2.15e-15,11;CL:0002032,6.24e-15,161;CL:0000837,6.24e-15,161;CL:0000624,1.08e-13,6;CL:0000084,5.40e-10,25;CL:0000827,5.40e-10,25;CL:0002087,7.09e-10,115;CL:0000791,6.60e-09,18;CL:0000789,6.60e-09,18;CL:0002420,6.60e-09,18;CL:0002419,6.60e-09,18;CL:0000790,6.60e-09,18;CL:0002031,2.95e-08,120;CL:0000838,4.99e-08,52;CL:0000763,5.77e-08,108;CL:0000049,5.77e-08,108;CL:0000623,8.02e-08,3;CL:0000825,8.02e-08,3;CL:0000542,8.52e-08,53;CL:0000051,8.52e-08,53;CL:0000775,8.76e-08,3;CL:0000226,8.95e-08,3;CL:0000842,8.95e-08,3;CL:0000898,2.08e-07,3;CL:0000766,5.07e-07,72;CL:0000767,5.94e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;7.55e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.51e-07!102;UBERON:0003061!1.51e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.95e-10;15!UBERON:0000179;3.95e-10;15!UBERON:0000463;3.95e-10;15!UBERON:0002390;1.30e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.98e-10,15;UBERON:0000179,6.98e-10,15;UBERON:0000463,6.98e-10,15;UBERON:0002390,2.40e-08,98;UBERON:0003061,2.40e-08,98;UBERON:0002193,5.62e-07,108 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.572471974262113,0.684372125364421,0.251085279189606,0.534893840235659,0.410502947249729,0.787107813136792,1.96682138424452,6.1412703695554,1.39334510984468,0,0,0,0.309868802321207,0.568676929949686,1.76160263600908,1.66198622559563,3.00816671205213,2.60413044859022,0,0,0.257575567634187,0.872389432677388,0,0.970336244751265,0.464858073811369,0.822335776043652,0.619412741790207,0,1.0246428261164,1.6553756092201,0.344745680736619,1.29096936716765,0,0.941211697713023,0.545812300115692,0.898893937780338,0.918251677112708,1.92557416245656,1.91801137739712,1.9791078011203,1.19678194572979,1.70489900213078,0,0,1.24564449799115,0.502497330513487,0.521482918420201,0.217188844705117,0,0.736555271975129,0.632924774881769,0.211255286311942,0,0.419317291016752,0.786300418025466,0.750884464207532,0.48217676009124,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0.426730222566507,0,0.574752439954483,0.661044872784862,0,0.569212969109448,8.80855784056408,3.82273228125229,3.96513985737078,10.0891541336676,0.790152254325231,4.32761494250433,6.28817220398664,9.04646595597841,0,8.79990119910694,1.89379122293893,3.89653456815823,0.334231370655521,3.24066498222321,2.43687284041983,1.08321545506006,0.25618263945135,0.260118695119756,0.328875809207352,0,0.289803085735052,2.22429844743091,1.07016331235885,0,0.113309342697566,1.91610246800961,2.40539211837841,1.26509846009751,0,0,0,0.451725357233318,0.639933055772092,0,0.236777252044017,0.821127996921047,7.05623601286563,8.02320587350522,5.79297615531196,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0.945348171640679,0.443458794925128,0.43917392846563,0.327447688744282,0.364295288292542,0,0,0.522389211897802,0.132957960518865,0.238490624305342,1.14398982156026,1.85728750664782,0.198762407366705,0,0,1.13061588384802,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.788280363383256,0,0,0.183201743930407,7.9068250461638,7.75560528296651,0,0,0,0.529636723252875,0.286836620748814,0,0.560677600142307,0,0,0,0.538842688278752,0.163461903113459,0.302714855289863,0.576175924479999,0,0,0,0,0.23486899728753,0,0,0.204154171254893,0.122834317311768,0,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0,0.358779271377724,0,0,0,0.412210116953756,0.257640540045629,0.37223371266318,0.506328996723799,0.0974370051611986,0.504867548488229,0.0920498986422993,0,0.355009592516614,0,0,0.193260853163297,0,0,0.243947412259191,0.265059536642971,0.348581828608555,0.310983165046111,0.756962552626885,1.45990943630332,0,0,0,0,0,0.118306800039844,0,0,0.220587945464788,0,0,0,0.196221465125346,0,0,0,0,0,2.53510069643662,0,0.590789906681404,1.7658523976586,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0.246217006087397,0.234004265139238,0,1.87467667973554,0,0.141775097242386,0.268675568108545,0,0,5.41929561685538,0.264145302039678,0,0.144119953416961,0.37872730027914,0.126995788584338,0,0,0,0.205654985406647,0.300343057843917,1.14330573052231,0.112131084345361,0,0.22001485746285,0.258543431515556,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0.289562613335158,0,0.179060963239896,0.224170287987055,5.71389204585589,4.74380664690938,5.26206448746968,1.27047312111232,2.60279707715243,0.773288812777695,0.167516265334349,0,3.74503511973591,8.97484377612075,4.14415513436035,0.36807447515742,0,0.271265023699736,0.207970861530807,0.356857977594324,0,0.35142424497814,0,2.27407504055985,0,0.664225598535437,0.184369168541703,0,0,0,3.72182447021197,4.52999821719095,8.64493218207899,0,0,0.30239029332968,0.496215615637554,0.306923946576125,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0.232420756919918,0.241718899183244,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0.223874754722178,0.877039506583738,0.522870902049801,0,0,0.325378394664303,0,0.457847324091717,0.41254749960294,0,0,0,0.290012154876366,0,0.15350367472613,0.137836572484531,0.322260734604821,0.145016693914229,0.426133137080504,0.178064071293475,0.165284915360978,0.384380134730212,0.255225424989168,0,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0.38126038784765,0,0,0,0,0,0,0.471249609382746,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,1.13929437434833,0,0.411362273086194,0,1.08006287447623,0,0.427296284509893,0,0.245040215981032,0,0.577076851905779,1.4939787103167,0.478278818186467,0.59873811429845,0.383010740264733,0,0.324621940274555,0,0,0.626719583092093,0,0,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0.223676107892416,0,0,0.556812347790485,2.46174797895425,0.540911356951966,1.33228787199128,0,0.37428108081644,0.439524537815682,0.242721043499027,0,0.284136146806413,0.23874448473769,0,0,0.994147647766298,0.422008249231538,0.3339261150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| |||
|short_description=p@chr5:98264490..98264505,- | |||
}} |
Revision as of 06:41, 22 January 2014
Short description: | p@chr5:98264490..98264505, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:98264490..98264505, - |
Coexpression cluster: | C4535_Neutrophils_CD4_CD8_Peripheral_Eosinophils_CD34_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.11e-22 | 177 |
hematopoietic stem cell | 9.95e-21 | 168 |
leukocyte | 4.56e-19 | 136 |
granulocyte | 2.78e-17 | 8 |
blood cell | 2.15e-15 | 11 |
hematopoietic oligopotent progenitor cell | 6.24e-15 | 161 |
hematopoietic multipotent progenitor cell | 6.24e-15 | 161 |
CD4-positive, alpha-beta T cell | 1.08e-13 | 6 |
T cell | 5.40e-10 | 25 |
pro-T cell | 5.40e-10 | 25 |
nongranular leukocyte | 7.09e-10 | 115 |
mature alpha-beta T cell | 6.60e-09 | 18 |
alpha-beta T cell | 6.60e-09 | 18 |
immature T cell | 6.60e-09 | 18 |
mature T cell | 6.60e-09 | 18 |
immature alpha-beta T cell | 6.60e-09 | 18 |
hematopoietic lineage restricted progenitor cell | 2.95e-08 | 120 |
lymphoid lineage restricted progenitor cell | 4.99e-08 | 52 |
myeloid cell | 5.77e-08 | 108 |
common myeloid progenitor | 5.77e-08 | 108 |
natural killer cell | 8.02e-08 | 3 |
pro-NK cell | 8.02e-08 | 3 |
lymphocyte | 8.52e-08 | 53 |
common lymphoid progenitor | 8.52e-08 | 53 |
neutrophil | 8.76e-08 | 3 |
single nucleate cell | 8.95e-08 | 3 |
mononuclear cell | 8.95e-08 | 3 |
naive T cell | 2.08e-07 | 3 |
myeloid leukocyte | 5.07e-07 | 72 |
basophil | 5.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 6.98e-10 | 15 |
haemolymphatic fluid | 6.98e-10 | 15 |
organism substance | 6.98e-10 | 15 |
hematopoietic system | 2.40e-08 | 98 |
blood island | 2.40e-08 | 98 |
hemolymphoid system | 5.62e-07 | 108 |