FFCP PHASE1:Hg19::chr5:95997798..95997829,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=831 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1515 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=20bp_to_ENST00000508830_5end | |||
|description=CAGE_peak_8_at_CAST_5end | |||
|id=chr5:95997798..95997829,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.75e-23!42;CL:0000860!4.92e-21!45;CL:0000766!9.87e-21!76;CL:0000557!4.49e-20!71;CL:0002194!9.38e-20!63;CL:0000576!9.38e-20!63;CL:0000040!9.38e-20!63;CL:0000559!9.38e-20!63;CL:0000839!3.39e-19!70;CL:0002009!1.59e-18!65;CL:0000048!2.16e-07!430;CL:0000723!4.71e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.55e-18;33!CL:0002057;1.55e-18;33!CL:0000473;1.35e-15;39!CL:0000234;1.35e-15;39!CL:0000576;2.72e-15;48!CL:0000766;6.00e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.09e-23,42;CL:0002057,1.09e-23,42;CL:0000473,2.33e-23,48;CL:0000234,2.33e-23,48;CL:0000766,3.50e-22,72;CL:0000557,3.24e-21,67;CL:0002194,3.36e-21,59;CL:0000576,3.36e-21,59;CL:0000040,3.36e-21,59;CL:0000559,3.36e-21,59;CL:0000839,8.83e-21,66;CL:0002009,1.19e-19,61;CL:0000048,2.38e-08,427;CL:0000723,4.47e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;2.54e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!3.23e-19!167;UBERON:0000926!1.27e-18!448;UBERON:0004120!1.27e-18!448;UBERON:0006603!1.27e-18!448;UBERON:0002371!2.21e-18!80;UBERON:0001474!1.84e-16!86;UBERON:0004765!3.10e-15!101;UBERON:0001434!3.10e-15!101;UBERON:0000467!1.79e-14!625;UBERON:0000480!2.26e-14!626;UBERON:0000468!2.40e-14!659;UBERON:0003081!1.90e-13!216;UBERON:0002390!5.91e-13!102;UBERON:0003061!5.91e-13!102;UBERON:0000062!1.30e-12!511;UBERON:0002193!3.83e-12!112;UBERON:0002405!3.68e-11!115;UBERON:0002050!1.82e-09!605;UBERON:0005423!1.82e-09!605;UBERON:0000923!2.55e-09!604;UBERON:0005291!2.55e-09!604;UBERON:0006598!2.55e-09!604;UBERON:0002532!2.55e-09!604;UBERON:0000922!2.94e-08!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.90e-20,315;UBERON:0004120,1.90e-20,315;UBERON:0006603,1.90e-20,315;UBERON:0002204,9.20e-20,167;UBERON:0002371,5.70e-19,76;UBERON:0001474,1.11e-16,82;UBERON:0004765,2.39e-16,90;UBERON:0001434,1.11e-15,100;UBERON:0003081,3.22e-15,203;UBERON:0002405,4.72e-14,93;UBERON:0002390,4.31e-13,98;UBERON:0003061,4.31e-13,98;UBERON:0002193,3.90e-12,108;UBERON:0002050,9.84e-11,564;UBERON:0000923,1.31e-10,560;UBERON:0010316,1.31e-10,560;UBERON:0005291,1.31e-10,560;UBERON:0006598,1.31e-10,560;UBERON:0010317,1.31e-10,560;UBERON:0002532,1.31e-10,560;UBERON:0005423,1.14e-08,581;UBERON:0000922,1.62e-07,592 | |||
|phase1_expression=10.3556676184217,4.92431204949261,8.17535543756633,8.00586386825043,9.83314407740033,11.3404008133048,0,2.52687949370732,4.96252693579693,0.737201809504527,0,3.49506195408276,2.63766978228454,3.46545788288131,2.65117900582333,6.05092631806598,13.2592796165275,6.57279081348636,8.29485757943862,2.83178433576612,2.04000691244253,2.19418305034661,2.86235987131057,1.91624195102038,1.63205431473244,0.458480434487708,0.410502947249729,0.472264687882075,3.14691421479123,3.45446458287491,6.65709330259127,0,0.6024118375565,5.17655614233503,1.47187681102573,0.426507697462265,0.587200878669695,6.64794490238253,6.81851121398482,5.64228263861215,4.70222495903841,3.2389366601898,4.12120908214698,15.703009788193,12.0920301980419,11.1588668146395,14.1781712512468,8.22335776043652,9.29119112685311,14.6723120084297,14.8573209786878,11.1146648047635,13.7898272294647,16.7826017731795,12.1883837934908,16.5653258797492,10.0975275521403,4.94391665779186,14.9981107261742,11.5534449747394,8.31138263538754,13.1940520074686,11.5688921420546,10.6556187633174,12.1887880224005,13.0498601678962,6.22822248995575,13.0649305933506,13.5585558789252,7.8187984093842,15.1349875658342,13.6262725315399,6.96217252369946,6.97142444829408,10.6302149982522,4.82214884669265,8.64930459828012,9.4611442490149,11.2507910687956,9.12040779971995,12.1339173091445,7.30656615058536,0,0,0,0,0.400395987036012,0,0.661044872784862,0.954053754535364,0,0,0,0,0.560508562981536,0,0.393419540227666,0,0.205601498999509,0.501559486172034,0.651844533267181,0.946895611469467,0,1.33692548262208,0.589211814949674,1.10766947291811,0.270803863765016,0.384273959177026,0.650296737799391,0,0.552700035571697,0.869409257205157,0.14828656316206,0.267540828089713,0,1.0197840842781,0.383220493601921,0.34362744548263,0,0.95569624297229,0.651083453856419,0,1.35517607169996,1.02389288923535,1.24930726552346,2.36777252044017,1.64225599384209,1.20964045934839,1.33720097891754,0.579297615531196,4.87613732627923,1.34140171940727,6.13740296848946,3.2529523714611,5.51471701699479,5.06962816362883,1.5905718941022,2.91980922181582,4.72674085820339,3.54767035940102,3.60122621341817,1.63723844372141,3.27865759463288,2.22470665670658,2.27183175558278,3.30846500868608,3.0580330919339,0.715471872916026,0.571994910780128,0.371457501329565,1.59009925893364,0.860234595106124,2.08284300964557,5.08777147731609,2.09749718104953,1.10047216776027,1.25396979922086,3.6178346283706,2.49036383880697,2.67776490211736,1.20848795132744,0.760272105718513,0.488124115096339,3.30896772311282,4.0507097394088,1.42879565254528,2.69435247151404,2.0270066486998,0,0,2.19842092716489,1.31780417436063,0,1.74437620857014,3.47880366186723,6.83804762988731,12.1816446348161,2.86836620748814,1.77334191099179,3.92474320099615,5.33744978648525,4.9333509683432,3.11211035399766,2.96363478553314,3.26923806226917,4.38936540170301,6.91411109375999,2.34321431833797,2.49728061464256,3.99330275081114,1.79338416662161,2.11382097558777,2.10434827678571,2.94946694074722,2.24569588380383,2.08818339430006,4.33968280938215,4.75201142912821,4.45080472701402,4.55080680969013,0.718618141816238,2.35670559535693,2.25213335769535,4.71008996323111,4.82875382968922,3.0648779579902,5.70904623845068,2.60894021268048,3.94657198515496,8.32873816392413,5.08636562782948,3.90118424909723,11.026620628513,4.3798891807757,8.00302482225836,3.20675031258406,6.9180273664451,5.80597680761463,8.46859067509154,8.89053312503465,5.68015348026583,5.03760491138201,2.37384829234683,2.31913023795956,3.00020732649918,4.30206893083506,0.121973706129595,0.265059536642971,0.116193942869518,0.310983165046111,0,0.36497735907583,1.56449532329816,3.85944562915731,4.14404764057442,6.96551892047969,4.33127689001751,1.65629520055781,1.34867752062481,1.20505514941741,1.32352767278873,0.653638332277218,0.949082476444386,1.34831308160164,1.37355025587742,2.30848294167834,2.95262181849859,1.40241773803446,0.4115740113314,1.47008711385542,2.53510069643662,0.982827216677626,1.18157981336281,0,9.22413289073352,5.66173773985134,6.47526683910891,2.24803506515239,1.3068766413512,3.05541869023148,2.6064664424826,1.03993478527958,4.3299402607582,4.05756417412769,3.52226082707465,1.44366447761074,1.85194205030644,1.52203321787679,1.58040879591855,0.858486162094873,5.41677413392274,4.68008530278475,3.71577905721821,1.87467667973554,1.34385702559088,3.40260233381728,2.05984602216551,1.16253575405585,1.15014803749563,4.92663237895944,1.84901711427775,10.7810620081201,12.2501960404417,9.84690980725764,2.28592419451809,2.29193055334967,1.17217447210047,3.4214489204541,1.95372236136315,0.300343057843917,2.00078502841405,2.80327710863402,3.48768055066624,5.06034172164555,3.10252117818667,0,0.845302752556,3.45719551560332,0,0.514414748524284,1.41849132023278,0.799266537048298,3.57444984145369,3.7983512377401,0.823240336780769,2.60588947434988,4.97548728239564,1.58390374586686,3.01439377059586,0,3.59902768255405,6.08118903205952,2.51128545716063,2.10833939483032,5.27174682081482,11.486193583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| |||
|short_description=p8@CAST | |||
}} |
Revision as of 06:36, 22 January 2014
Short description: | p8@CAST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CAST_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000508830_5end |
EntrezGene: | CAST |
HGNC: | 1515 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.09e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.09e-23 | 42 |
defensive cell | 2.33e-23 | 48 |
phagocyte | 2.33e-23 | 48 |
myeloid leukocyte | 3.50e-22 | 72 |
granulocyte monocyte progenitor cell | 3.24e-21 | 67 |
monopoietic cell | 3.36e-21 | 59 |
monocyte | 3.36e-21 | 59 |
monoblast | 3.36e-21 | 59 |
promonocyte | 3.36e-21 | 59 |
myeloid lineage restricted progenitor cell | 8.83e-21 | 66 |
macrophage dendritic cell progenitor | 1.19e-19 | 61 |
multi fate stem cell | 2.38e-08 | 427 |
somatic stem cell | 4.47e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 1.90e-20 | 315 |
mesoderm-derived structure | 1.90e-20 | 315 |
presumptive mesoderm | 1.90e-20 | 315 |
musculoskeletal system | 9.20e-20 | 167 |
bone marrow | 5.70e-19 | 76 |
bone element | 1.11e-16 | 82 |
skeletal element | 2.39e-16 | 90 |
skeletal system | 1.11e-15 | 100 |
lateral plate mesoderm | 3.22e-15 | 203 |
immune system | 4.72e-14 | 93 |
hematopoietic system | 4.31e-13 | 98 |
blood island | 4.31e-13 | 98 |
hemolymphoid system | 3.90e-12 | 108 |
embryonic structure | 9.84e-11 | 564 |
germ layer | 1.31e-10 | 560 |
germ layer / neural crest | 1.31e-10 | 560 |
embryonic tissue | 1.31e-10 | 560 |
presumptive structure | 1.31e-10 | 560 |
germ layer / neural crest derived structure | 1.31e-10 | 560 |
epiblast (generic) | 1.31e-10 | 560 |
developing anatomical structure | 1.14e-08 | 581 |
embryo | 1.62e-07 | 592 |