FFCP PHASE1:Hg19::chr5:79950775..79950821,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1719 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2861 | |||
|TSSclassifier=strong | |||
|UniProt=P00374,B0YJ76 | |||
|association_with_transcript=0bp_to_ENST00000439211,NM_000791,uc003kgx.1,uc003kgy.1_5end | |||
|description=CAGE_peak_1_at_DHFR_5end | |||
|id=chr5:79950775..79950821,- | |||
|ontology_enrichment_celltype=CL:0000055!4.09e-12!180;CL:0000222!1.52e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.40e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.01e-09!94;UBERON:0001016!4.01e-09!94;UBERON:0005743!5.62e-08!86;UBERON:0001017!1.25e-07!82;UBERON:0000475!3.05e-07!365;UBERON:0000914!5.69e-07!83;UBERON:0002329!5.69e-07!83;UBERON:0003077!5.69e-07!83;UBERON:0003059!5.69e-07!83;UBERON:0007282!5.69e-07!83;UBERON:0009618!5.69e-07!83;UBERON:0007285!5.69e-07!83;UBERON:0000477!8.47e-07!286 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.57e-08,89;UBERON:0001017,2.12e-07,81;UBERON:0010314,6.79e-07,132 | |||
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| |||
|short_description=p1@DHFR | |||
}} |
Revision as of 06:13, 22 January 2014
Short description: | p1@DHFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DHFR_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000439211, NM_000791, uc003kgx.1, uc003kgy.1_5end |
EntrezGene: | DHFR |
HGNC: | 2861 |
UniProt: | P00374B0YJ76 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.40e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.57e-08 | 89 |
central nervous system | 2.12e-07 | 81 |
structure with developmental contribution from neural crest | 6.79e-07 | 132 |