FFCP PHASE1:Hg19::chr5:32713147..32713156,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=398bp_to_AK307217_5end | |||
|description=CAGE_peak_1_at_AK307217_5end | |||
|id=chr5:32713147..32713156,- | |||
|ontology_enrichment_celltype=CL:0000055!3.83e-27!180;CL:0000034!3.99e-16!444;CL:0000048!8.73e-16!430;CL:0000680!1.88e-15!57;CL:0000056!1.88e-15!57;CL:0000355!1.88e-15!57;CL:0000723!3.97e-15!436;CL:0000057!1.39e-14!75;CL:0000187!7.79e-13!54;CL:0002371!1.04e-11!591;CL:0000144!1.06e-11!625;CL:0000183!4.90e-11!59;CL:0000393!1.02e-10!60;CL:0000211!1.02e-10!60;CL:0000192!2.77e-10!42;CL:0000514!2.77e-10!42;CL:0000359!6.46e-10!32;CL:0000136!4.18e-08!15;CL:0002320!4.78e-08!365;CL:0002334!6.57e-08!12;CL:0000012!1.38e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.05e-12;9!CL:0000447;2.05e-12;9!CL:0000359;9.94e-11;32!CL:0002595;2.60e-10;5!CL:0002615;3.96e-10;3!CL:0000135;4.27e-10;3!CL:0000388;4.27e-10;3!CL:0000515;2.04e-09;3!CL:0000138;5.32e-09;6!CL:0000197;1.05e-08;6!CL:0000098;1.05e-08;6!CL:0002167;1.05e-08;6!CL:0000136;1.52e-08;13!CL:0002617;6.05e-08;2!CL:0000499;1.40e-07;28!CL:0000192;3.38e-07;43!CL:0002602;3.40e-07;2!CL:0002561;3.46e-07;2!CL:0002539;3.59e-07;10!CL:0000056;3.65e-07;4!CL:0000327;3.83e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.68e-12,9;CL:0000447,1.68e-12,9;CL:0000359,5.75e-11,32;CL:0002595,1.90e-10,5;CL:0002615,3.56e-10,3;CL:0000135,3.91e-10,3;CL:0000388,3.91e-10,3;CL:0000034,3.86e-09,441;CL:0000058,4.77e-09,6;CL:0000138,4.77e-09,6;CL:0000197,1.10e-08,6;CL:0000098,1.10e-08,6;CL:0002167,1.10e-08,6;CL:0000048,1.47e-08,427;CL:0000723,2.85e-08,433;CL:0000680,3.74e-08,58;CL:0000056,3.74e-08,58;CL:0000355,3.74e-08,58;CL:0002617,6.69e-08,2;CL:0000499,1.26e-07,28;CL:0000192,1.64e-07,43;CL:0000514,1.64e-07,43;CL:0000515,2.23e-07,4;CL:0000136,2.66e-07,15;CL:0002602,2.83e-07,2;CL:0000327,3.43e-07,15;CL:0002561,3.74e-07,2;CL:0002539,4.16e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.38e-07;43!CL:0000515;3.65e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!6.76e-15!61;UBERON:0002036!6.76e-15!61;UBERON:0003082!6.76e-15!61;UBERON:0000914!7.13e-15!83;UBERON:0002329!7.13e-15!83;UBERON:0003077!7.13e-15!83;UBERON:0003059!7.13e-15!83;UBERON:0007282!7.13e-15!83;UBERON:0009618!7.13e-15!83;UBERON:0007285!7.13e-15!83;UBERON:0002385!4.16e-14!63;UBERON:0001015!4.16e-14!63;UBERON:0000383!4.16e-14!63;UBERON:0004290!9.78e-13!70;UBERON:0002204!2.58e-12!167;UBERON:0004573!9.29e-12!33;UBERON:0004571!9.29e-12!33;UBERON:0000486!2.52e-11!82;UBERON:0001637!4.94e-11!42;UBERON:0003509!4.94e-11!42;UBERON:0004572!4.94e-11!42;UBERON:0003688!4.44e-09!6;UBERON:0002358!4.44e-09!6;UBERON:0003684!4.44e-09!6;UBERON:0001178!4.44e-09!6;UBERON:0004457!1.36e-08!12;UBERON:0000042!1.36e-08!12;UBERON:0002384!1.11e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.20e-16;9!UBERON:0000042;4.20e-16;9!UBERON:0003688;7.05e-13;6!UBERON:0002358;7.05e-13;6!UBERON:0003684;7.05e-13;6!UBERON:0001178;7.05e-13;6!UBERON:0003834;2.60e-10;5!UBERON:0001533;2.60e-10;5!UBERON:0007846;4.27e-10;3!UBERON:0000043;4.27e-10;3!UBERON:0007845;4.27e-10;3!UBERON:0004905;2.27e-09;8!UBERON:0000982;2.27e-09;8!UBERON:0004770;2.27e-09;8!UBERON:0004573;3.17e-08;33!UBERON:0004571;3.17e-08;33!UBERON:0002204;6.74e-08;70!UBERON:0001434;1.25e-07;36!UBERON:0003513;2.32e-07;7!UBERON:0005406;3.15e-07;2!UBERON:0006444;3.40e-07;2!UBERON:0001995;3.40e-07;2!UBERON:0004715;3.40e-07;2!UBERON:0005933;3.46e-07;2!UBERON:0005942;3.46e-07;2!UBERON:0005932;3.46e-07;2!UBERON:0004237;3.59e-07;10!UBERON:0004695;3.59e-07;10!UBERON:0002111;3.59e-07;10!UBERON:0004178;3.59e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.01e-12,6;UBERON:0002358,1.01e-12,6;UBERON:0003684,1.01e-12,6;UBERON:0001178,1.01e-12,6;UBERON:0004457,9.78e-12,12;UBERON:0000042,9.78e-12,12;UBERON:0003834,1.90e-10,5;UBERON:0001533,1.90e-10,5;UBERON:0007846,3.91e-10,3;UBERON:0000043,3.91e-10,3;UBERON:0007845,3.91e-10,3;UBERON:0002204,2.36e-09,167;UBERON:0004905,2.36e-09,8;UBERON:0000982,2.36e-09,8;UBERON:0004770,2.36e-09,8;UBERON:0004573,7.00e-09,33;UBERON:0004571,7.00e-09,33;UBERON:0001637,9.50e-08,42;UBERON:0003509,9.50e-08,42;UBERON:0004572,9.50e-08,42;UBERON:0003513,1.87e-07,7;UBERON:0001134,2.04e-07,62;UBERON:0002036,2.04e-07,62;UBERON:0003082,2.04e-07,62;UBERON:0006444,2.83e-07,2;UBERON:0001995,2.83e-07,2;UBERON:0004715,2.83e-07,2;UBERON:0005406,3.11e-07,2;UBERON:0005933,3.74e-07,2;UBERON:0005942,3.74e-07,2;UBERON:0005932,3.74e-07,2;UBERON:0004237,4.16e-07,10;UBERON:0004695,4.16e-07,10;UBERON:0002111,4.16e-07,10;UBERON:0004178,4.16e-07,10;UBERON:0002385,4.38e-07,64;UBERON:0001015,4.38e-07,64;UBERON:0000383,4.38e-07,64 | |||
|phase1_expression=6.17706489519893,6.63711624062048,4.51054093107108,3.00219895059391,1.78784437770915,5.23403114460221,0,0,0,0,0,0,0,2.72285976512103,2.65117900582333,0,0.602694528023977,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,3.81680571135301,1.66198622559563,0.401088894940283,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0.545812300115692,0,0,0.641858054152187,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89151321907653,20.5548543360715,6.66293987219789,0,2.43317435151318,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886413581652058,0.132409180813219,0.286836620748814,0.354668382198357,2.24271040056923,0,0.49333509683432,0,0,0,0.151357427644931,0,0,0.936480230490962,0,0,0,0,0,0,0,0,1.18800285728205,0.494533858557114,0,0,0,0.125118519871964,0,0,1.83892677479412,3.15499923703853,0.113432183160021,0,0,0.423863802319124,0.300091096084402,1.13357782162283,0.257640540045629,0.18611685633159,1.18143432568886,4.67697624773753,0.252433774244115,0.184099797284599,0.484938170456436,0.355009592516614,2.21654616100809,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17931135228781,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.36669142910475,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,1.14861935834114,0,2.31650090668127,1.84928690295345,1.96967059563885,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,1.08506009479894,3.32753378449291,3.39015078714607,2.99634588564476,2.10854546986884,1.50473049863859,6.82222512167955,0,0,0.553107505625109,0.0868836144680828,0,0,0,0,0,0,0,0,2.48107807818777,3.6830873589135,0.841980283299221,1.02511319404561,3.07024349440022,0.64341568457443,1.48418066444991,0.154209693802656,0,0.0821271560138091,0,0,0,0,0,0.34444334449382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0.15350367472613,0.275673144969061,0.429680979473094,0.580066775656914,0.0852266274161009,0.712256285173899,0,0,0,0,1.39453664789186,1.25924938732256,2.0911118104818,2.15623506123262,0.532306030317022,1.73986598415015,0.18532421910392,0,0,0,0,0.767693373934002,0,1.59101623962968,0.78494864019923,0.719489830333259,0,0,0.202182481573316,6.34041284692033,0,0,4.38684281336312,0,0,0.282810863907425,1.13008116620243,3.85955740482287,1.99031692572366,2.19225442626881,0,0.655894752046633,0,0,0.281695602532241,0,0,0,0,4.64436797654861,1.64647446479951,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,6.98522822988813,0,0.842391534340376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0.757612021100357,1.76097531226803,3.55924488638614,0,0,1.70980920641059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0.358177682162975,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0.705351887381368,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45701962667338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509781344063451,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,2.97596014533401,12.9409176016797,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p1@AK307217 | |||
}} |
Revision as of 04:57, 22 January 2014
Short description: | p1@AK307217 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AK307217_5end |
Coexpression cluster: | NA |
Association with transcript: | 398bp_to_AK307217_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.68e-12 | 9 |
carbohydrate secreting cell | 1.68e-12 | 9 |
vascular associated smooth muscle cell | 5.75e-11 | 32 |
smooth muscle cell of the subclavian artery | 1.90e-10 | 5 |
adipocyte of omentum tissue | 3.56e-10 | 3 |
fibrocyte | 3.91e-10 | 3 |
tendon cell | 3.91e-10 | 3 |
stem cell | 3.86e-09 | 441 |
chondroblast | 4.77e-09 | 6 |
chondrocyte | 4.77e-09 | 6 |
receptor cell | 1.10e-08 | 6 |
sensory epithelial cell | 1.10e-08 | 6 |
olfactory epithelial cell | 1.10e-08 | 6 |
multi fate stem cell | 1.47e-08 | 427 |
somatic stem cell | 2.85e-08 | 433 |
muscle precursor cell | 3.74e-08 | 58 |
myoblast | 3.74e-08 | 58 |
multi-potent skeletal muscle stem cell | 3.74e-08 | 58 |
adipocyte of breast | 6.69e-08 | 2 |
stromal cell | 1.26e-07 | 28 |
smooth muscle cell | 1.64e-07 | 43 |
smooth muscle myoblast | 1.64e-07 | 43 |
skeletal muscle myoblast | 2.23e-07 | 4 |
fat cell | 2.66e-07 | 15 |
annulus pulposus cell | 2.83e-07 | 2 |
extracellular matrix secreting cell | 3.43e-07 | 15 |
outer root sheath cell | 3.74e-07 | 2 |
aortic smooth muscle cell | 4.16e-07 | 10 |