FFCP PHASE1:Hg19::chr5:1082038..1082051,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=10723 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10915 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-265bp_to_ENST00000510943_5end | |||
|coexpression_cluster_id=C575 | |||
|description=CAGE_peak_4_at_SLC12A7_5end | |||
|id=chr5:1082038..1082051,- | |||
|ontology_enrichment_celltype=CL:0002057!3.59e-66!42;CL:0000860!6.44e-66!45;CL:0002009!2.27e-53!65;CL:0000557!2.71e-48!71;CL:0002194!8.78e-48!63;CL:0000576!8.78e-48!63;CL:0000040!8.78e-48!63;CL:0000559!8.78e-48!63;CL:0000839!2.30e-42!70;CL:0000766!1.91e-41!76;CL:0000763!3.89e-30!112;CL:0000049!3.89e-30!112;CL:0000738!7.27e-30!140;CL:0002031!2.08e-28!124;CL:0002087!7.90e-28!119;CL:0000037!8.56e-23!172;CL:0000566!8.56e-23!172;CL:0000988!1.44e-22!182;CL:0002032!6.18e-21!165;CL:0000837!6.18e-21!165;CL:0001014!2.06e-09!2;CL:0001016!2.06e-09!2;CL:0000134!2.02e-07!358;CL:0002320!3.99e-07!365;CL:0000840!8.40e-07!5;CL:0001029!8.40e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.12e-43;33!CL:0002057;9.12e-43;33!CL:0000473;1.80e-30;39!CL:0000234;1.80e-30;39!CL:0000576;2.13e-27;48!CL:0000766;6.67e-19;69!CL:0001014;2.52e-17;2!CL:0001016;2.52e-17;2!CL:0002393;1.99e-13;6!CL:0002397;1.99e-13;6!CL:0002087;3.85e-13;104!CL:0000840;8.85e-13;5!CL:0000990;1.07e-08;8!CL:0000763;1.85e-08;100!CL:0000453;1.80e-07;5!CL:0000451;3.34e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.37e-54,42;CL:0002057,1.37e-54,42;CL:0002009,2.30e-50,61;CL:0000473,2.03e-47,48;CL:0000234,2.03e-47,48;CL:0000557,1.21e-45,67;CL:0002194,5.53e-42,59;CL:0000576,5.53e-42,59;CL:0000040,5.53e-42,59;CL:0000559,5.53e-42,59;CL:0000839,2.75e-37,66;CL:0000766,5.61e-34,72;CL:0000763,2.84e-27,108;CL:0000049,2.84e-27,108;CL:0002031,3.04e-24,120;CL:0000738,2.04e-23,136;CL:0002087,9.06e-23,115;CL:0000037,2.45e-18,168;CL:0002032,2.87e-17,161;CL:0000837,2.87e-17,161;CL:0000988,3.09e-17,177;CL:0001014,3.10e-17,2;CL:0001016,3.10e-17,2;CL:0000840,1.02e-12,5;CL:0001029,1.02e-12,5;CL:0002393,3.97e-09,9;CL:0002397,3.97e-09,9;CL:0000990,1.18e-08,8;CL:0000453,1.96e-07,5;CL:0000451,3.61e-07,10;CL:0000134,7.37e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;3.94e-37;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.35e-42!80;UBERON:0001474!1.15e-38!86;UBERON:0002390!2.82e-36!102;UBERON:0003061!2.82e-36!102;UBERON:0002193!2.28e-32!112;UBERON:0004765!7.19e-32!101;UBERON:0001434!7.19e-32!101;UBERON:0002405!4.07e-27!115;UBERON:0002204!1.01e-17!167;UBERON:0003081!3.51e-14!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.09e-40,76;UBERON:0001474,7.98e-37,82;UBERON:0002390,1.11e-33,98;UBERON:0003061,1.11e-33,98;UBERON:0004765,2.63e-33,90;UBERON:0002405,3.85e-32,93;UBERON:0002193,2.74e-30,108;UBERON:0001434,1.09e-29,100;UBERON:0002204,1.57e-16,167;UBERON:0003081,1.34e-14,203;UBERON:0000926,3.70e-08,315;UBERON:0004120,3.70e-08,315;UBERON:0006603,3.70e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,13.2958898047651,19.853900299544,6.2933152507597,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0.232429036905685,0.822335776043652,1.23882548358041,1.43846196161075,0.768482119587302,0.709446689665756,11.3766074643084,36.1471422806943,18.9597081232078,0.188242339542605,0,0.224723484445085,3.36692281607993,8.66508373105453,3.83602275479425,0,0,0.426224750532694,4.35313857942876,5.6738522469114,3.11411124497787,0,0,0,6.05399502633369,26.1477121551171,7.91155968602211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,8.40762844472304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.19245312152671,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30855429190677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,32.1692117547014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1248694577575,5.41661368190565,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p4@SLC12A7 | |||
}} |
Revision as of 04:29, 22 January 2014
Short description: | p4@SLC12A7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_4_at_SLC12A7_5end |
Coexpression cluster: | C575_embryonic_CD14_CD34_immature_chorionic_Mast_testis |
Association with transcript: | -265bp_to_ENST00000510943_5end |
EntrezGene: | SLC12A7 |
HGNC: | 10915 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.09e-40 | 76 |
bone element | 7.98e-37 | 82 |
hematopoietic system | 1.11e-33 | 98 |
blood island | 1.11e-33 | 98 |
skeletal element | 2.63e-33 | 90 |
immune system | 3.85e-32 | 93 |
hemolymphoid system | 2.74e-30 | 108 |
skeletal system | 1.09e-29 | 100 |
musculoskeletal system | 1.57e-16 | 167 |
lateral plate mesoderm | 1.34e-14 | 203 |
mesoderm | 3.70e-08 | 315 |
mesoderm-derived structure | 3.70e-08 | 315 |
presumptive mesoderm | 3.70e-08 | 315 |