FFCP PHASE1:Hg19::chr4:169552238..169552253,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1139 | |||
|description=CAGE_peak_at_chr4:169552238..169552253,+ | |||
|id=chr4:169552238..169552253,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.19e-15!180;CL:0002334!7.86e-14!12;CL:0000188!8.89e-11!9;CL:0000680!4.32e-10!57;CL:0000056!4.32e-10!57;CL:0000355!4.32e-10!57;CL:0000128!1.65e-09!7;CL:0000126!1.65e-09!7;CL:0000127!1.65e-09!7;CL:0002453!1.65e-09!7;CL:0000183!3.11e-08!59;CL:0000187!1.85e-07!54;CL:0002580!4.87e-07!3;CL:0002603!4.96e-07!3;CL:0002371!6.18e-07!591;CL:0000144!6.84e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000515;5.87e-30;3!CL:0002603;3.88e-29;3!CL:0002580;6.27e-29;3!CL:0000056;1.21e-22;4!CL:0002617;5.94e-20;2!CL:0002334;9.54e-20;12!CL:0002579;7.91e-14;3!CL:0000680;3.36e-13;7!CL:0000128;7.46e-13;7!CL:0000126;7.46e-13;7!CL:0000127;7.46e-13;7!CL:0000222;1.27e-10;1!CL:0002321;1.53e-10;15!CL:0000136;4.47e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002580,4.28e-29,3;CL:0002603,4.71e-29,3;CL:0000515,1.46e-22,4;CL:0002617,4.90e-20,2;CL:0002334,8.49e-20,12;CL:0002579,8.44e-14,3;CL:0000128,8.09e-13,7;CL:0000126,8.09e-13,7;CL:0000127,8.09e-13,7;CL:0002453,8.09e-13,7 | |||
|ontology_enrichment_development_v019=CL:0000515;1.21e-22;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!1.63e-11!6;UBERON:0002358!1.63e-11!6;UBERON:0003684!1.63e-11!6;UBERON:0001178!1.63e-11!6;UBERON:0001134!4.97e-09!61;UBERON:0002036!4.97e-09!61;UBERON:0003082!4.97e-09!61;UBERON:0002385!1.49e-08!63;UBERON:0001015!1.49e-08!63;UBERON:0000383!1.49e-08!63;UBERON:0000486!4.40e-08!82;UBERON:0004290!5.38e-08!70;UBERON:0000914!2.13e-07!83;UBERON:0002329!2.13e-07!83;UBERON:0003077!2.13e-07!83;UBERON:0003059!2.13e-07!83;UBERON:0007282!2.13e-07!83;UBERON:0009618!2.13e-07!83;UBERON:0007285!2.13e-07!83;UBERON:0000488!4.58e-07!4;UBERON:0000475!9.87e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;1.48e-23;10!UBERON:0001443;2.05e-21;11!UBERON:0002037;6.72e-15;6!UBERON:0003688;7.22e-15;6!UBERON:0002358;7.22e-15;6!UBERON:0003684;7.22e-15;6!UBERON:0001178;7.22e-15;6!UBERON:0002680;4.06e-10;9!UBERON:0001895;4.06e-10;9!UBERON:0004457;4.25e-10;9!UBERON:0000042;4.25e-10;9!UBERON:0004733;1.03e-07;12!UBERON:0002028;1.03e-07;12!UBERON:0004732;3.73e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,1.12e-23,10;UBERON:0001443,1.59e-21,11;UBERON:0002037,7.39e-15,6;UBERON:0006215,7.39e-15,6;UBERON:0003688,8.94e-15,6;UBERON:0002358,8.94e-15,6;UBERON:0003684,8.94e-15,6;UBERON:0001178,8.94e-15,6;UBERON:0002680,4.32e-10,9;UBERON:0001895,4.32e-10,9;UBERON:0010092,4.32e-10,9;UBERON:0004733,1.08e-07,12;UBERON:0002028,1.08e-07,12;UBERON:0007277,1.08e-07,12;UBERON:0004457,1.19e-07,12;UBERON:0000042,1.19e-07,12;UBERON:0004732,3.89e-07,13 | |||
|phase1_expression=3.99692434395225,1.49870366723688,0.845726424575827,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,2.58554221961255,1.02000345622126,7.20945859399602,0,0.684372125364421,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0.189069634328136,0.665188192387692,0.351339142772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.506522046658319,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0.194874010322397,0.757301322732344,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68771405118175,0.850650583454319,0.0895585227028483,0,0,0,0,0.829312462163088,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0.823240336780769,0,0,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,13.4646615200849,2.26023954805422,40.4677776922164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0.664225598535437,0.737476674166813,0,0,0,0,0,0,0,0,0,1.48864684691266,10.7423381301644,1.68396056659844,0.384417447767103,2.55853624533352,3.53878626515936,0,0.308419387605311,0.177561725313127,0.164254312027618,0,0.348631135379878,0,0.601519410909855,0,0,0,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.541892875087706,0.501689773854853,0,0,0,0,0,0,0,0.325378394664303,0,0.366277859273374,0.247528499761764,0,0.650060246036521,0,0.290012154876366,0.154048617114644,0.460511024178389,0.413509717453592,0.214840489736547,0.145016693914229,0.170453254832202,0.890320356467374,0,0,0,0,0.929691098594572,0,0,0,0.532306030317022,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0.438450885253763,0,0,0.608731130888112,0,0.563391205064483,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146178634172371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,2.72620834856675,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0.777186002913902,0.147855149989634,0.159296767163702,0.449803112163605,0.621051827505038,0,0.53168342911599,0,0.150257608997218,0,1.22061219961398,0.181848659202559,0,0,0,8.40058305792623,0.343395705182793,0,1.26184898228651,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr4:169552238..169552253,+ | |||
}} |
Revision as of 03:55, 22 January 2014
Short description: | p@chr4:169552238..169552253, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:169552238..169552253, + |
Coexpression cluster: | C1139_Myoblast_mesenchymal_tongue_Preadipocyte_Astrocyte_nasal_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte of the breast | 4.28e-29 | 3 |
astrocyte of the cerebellum | 4.71e-29 | 3 |
skeletal muscle myoblast | 1.46e-22 | 4 |
adipocyte of breast | 4.90e-20 | 2 |
preadipocyte | 8.49e-20 | 12 |
omentum preadipocyte | 8.44e-14 | 3 |
oligodendrocyte | 8.09e-13 | 7 |
macroglial cell | 8.09e-13 | 7 |
astrocyte | 8.09e-13 | 7 |
oligodendrocyte precursor cell | 8.09e-13 | 7 |
Ontology term | p-value | n |
---|---|---|
breast | 1.12e-23 | 10 |
chest | 1.59e-21 | 11 |
cerebellum | 7.39e-15 | 6 |
rhombic lip | 7.39e-15 | 6 |
omentum | 8.94e-15 | 6 |
peritoneum | 8.94e-15 | 6 |
abdominal cavity | 8.94e-15 | 6 |
visceral peritoneum | 8.94e-15 | 6 |
regional part of metencephalon | 4.32e-10 | 9 |
metencephalon | 4.32e-10 | 9 |
future metencephalon | 4.32e-10 | 9 |
segmental subdivision of hindbrain | 1.08e-07 | 12 |
hindbrain | 1.08e-07 | 12 |
presumptive hindbrain | 1.08e-07 | 12 |
cavity lining | 1.19e-07 | 12 |
serous membrane | 1.19e-07 | 12 |
segmental subdivision of nervous system | 3.89e-07 | 13 |