FFCP PHASE1:Hg19::chr4:159094078..159094085,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51313 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25312 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=89bp_to_ENST00000503227_5end | |||
|description=CAGE_peak_13_at_FAM198B_5end | |||
|id=chr4:159094078..159094085,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002494;6.24e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,6.24e-08,16 | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.88e-09;1!UBERON:0004140;2.70e-09;1!UBERON:0005062;5.64e-09;4!UBERON:0007284;5.64e-09;4!UBERON:0010226;6.71e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.80e-16;2!DOID:178;6.71e-09;1!DOID:326;6.71e-09;1!DOID:3978;6.71e-09;1!DOID:3394;6.71e-09;1!DOID:5844;6.71e-09;1!DOID:1287;1.09e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.27e-16,2;DOID:178,5.31e-09,1;DOID:326,5.31e-09,1;DOID:3978,5.31e-09,1;DOID:3394,5.31e-09,1;DOID:5844,5.31e-09,1;DOID:1287,9.20e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007100!3.43e-15!27;UBERON:0007023!4.47e-15!115;UBERON:0004872!1.63e-14!84;UBERON:0003914!3.31e-12!118;UBERON:0001009!1.18e-11!113;UBERON:0000948!1.65e-11!24;UBERON:0005498!1.65e-11!24;UBERON:0004140!1.65e-11!24;UBERON:0009881!1.65e-11!24;UBERON:0004141!1.65e-11!24;UBERON:0003084!1.65e-11!24;UBERON:0007005!1.65e-11!24;UBERON:0004139!1.65e-11!24;UBERON:0004291!1.65e-11!24;UBERON:0000025!5.52e-11!194;UBERON:0004111!5.68e-11!241;UBERON:0004535!1.22e-09!110;UBERON:0003103!1.80e-09!69;UBERON:0000477!3.37e-08!286;UBERON:0000055!5.67e-08!69;UBERON:0001981!1.33e-07!60;UBERON:0007500!1.33e-07!60;UBERON:0004537!1.33e-07!60;UBERON:0006965!1.33e-07!60;UBERON:0000468!1.57e-07!659;UBERON:0000483!1.91e-07!309;UBERON:0002066!2.20e-07!5;UBERON:0000119!3.31e-07!312;UBERON:0001638!5.18e-07!9;UBERON:0003920!5.18e-07!9;UBERON:0004582!5.18e-07!9;UBERON:0000467!5.92e-07!625;UBERON:0000480!6.79e-07!626;UBERON:0002049!7.88e-07!79;UBERON:0007798!7.88e-07!79;UBERON:0000922!8.81e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.45e-43;25!UBERON:0000948;2.06e-27;22!UBERON:0003978;1.11e-11;3!UBERON:0000946;1.11e-11;3!UBERON:0004151;2.14e-11;3!UBERON:0002146;1.74e-09;1!UBERON:0005623;1.74e-09;1!UBERON:0002079;1.88e-09;1!UBERON:0002135;2.70e-09;1!UBERON:0002084;6.71e-09;1!UBERON:0002082;6.71e-09;1!UBERON:0003103;7.67e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.30e-39,27;UBERON:0000948,3.73e-25,24;UBERON:0005498,3.73e-25,24;UBERON:0004140,3.73e-25,24;UBERON:0009881,3.73e-25,24;UBERON:0004141,3.73e-25,24;UBERON:0003084,3.73e-25,24;UBERON:0007005,3.73e-25,24;UBERON:0004139,3.73e-25,24;UBERON:0004291,3.73e-25,24;UBERON:0001009,6.91e-15,112;UBERON:0003103,1.83e-14,68;UBERON:0004872,1.47e-13,83;UBERON:0003914,3.78e-12,117;UBERON:0003978,1.09e-11,3;UBERON:0009751,1.09e-11,3;UBERON:0000946,1.09e-11,3;UBERON:0002523,1.09e-11,3;UBERON:0005983,1.09e-11,3;UBERON:0002165,1.09e-11,3;UBERON:0002062,1.09e-11,3;UBERON:0007280,1.09e-11,3;UBERON:0004151,1.49e-11,3;UBERON:0004797,7.67e-11,7;UBERON:0004535,9.17e-10,109;UBERON:0002146,1.74e-09,1;UBERON:0005623,1.74e-09,1;UBERON:0002079,1.89e-09,1;UBERON:0002135,2.60e-09,1;UBERON:0002084,3.88e-09,1;UBERON:0002082,3.88e-09,1;UBERON:0010226,3.88e-09,1;UBERON:0000025,2.71e-07,192 | |||
|phase1_expression=0,0,0.422863212287913,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.511450247374121,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0.71153252537342,0,0,0,0,0.735326160691737,0,0.625098097988558,0.22452937262617,1.23872628531654,0,0,0.183201743930407,0,0,0,0,0.25326102332916,2.1185468930115,0.573673241497627,0.354668382198357,1.68203280042692,0,0,2.17847724779836,0.269421344139376,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.829288440122964,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,1.06617584622764,0,2.71295439353627,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384417447767103,0.511707249066704,0.482561763430822,0,0,0,0,0,0,0.483437798366489,0,0,1.60740227430449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,1.25924938732256,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0.762520775695299,0.255897791311334,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0.989838023675989,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0.687743287091848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0,0,0,6.37593562403423,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,1.13082457147153,0,0.995261931078505,0,0.611030144933625,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0.640358984218058,0,0,1.03082936549324,0,0,0,0,0.67952103036807,0.523014231561666,0,0.577901179803038,0,0,0,0.859530882839914,0,2.51354161145029,5.95817102430378,0,1.59743200399193,2.57535628881943,2.00854311697685,2.95607278941596,0,1.16495949527454,0.630265458457789,0.741742725430498,0.808842526250219,0,0,0,0,0,0,0,0,0,0.242998226632099,0,0.236417121897595,0.262272940674991,0,0,0,3.57347663186684,1.98627591109629,0.25426853765475,0.542999601753713,0.864221491201268,0.326587360109409,0,0,0.340776043570843,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,1.20984739010591,0,0.147855149989634,0,0,0.310525913752519,0.414706207840855,0.265841714557995,0,0.450772826991655,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.159633859057151,1.02558182120378,0,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,1.72983755203292,0,1.56302802246618,0,0,0,0.0675375846183947,0.781078098613847,0,0.19024743058172,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0.581207126840626,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,1.5299169235277,0,0.490296643507811,0,0.588925401344836,0,0,0.169927114687817,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0,0.530450887527676,0,0,0.103432995861895,0,0.23806443146374,0,0,0,0,0,0.217716747896961,0.342233301085281,0,0.215166616178029,0.665320713092027,0,0,0,0,0,0.855690109280065,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p13@FAM198B | |||
}} |
Revision as of 03:42, 22 January 2014
Short description: | p13@FAM198B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_FAM198B_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_ENST00000503227_5end |
EntrezGene: | FAM198B |
HGNC: | 25312 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 6.24e-08 | 16 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.30e-39 | 27 |
heart | 3.73e-25 | 24 |
primitive heart tube | 3.73e-25 | 24 |
primary heart field | 3.73e-25 | 24 |
anterior lateral plate mesoderm | 3.73e-25 | 24 |
heart tube | 3.73e-25 | 24 |
heart primordium | 3.73e-25 | 24 |
cardiac mesoderm | 3.73e-25 | 24 |
cardiogenic plate | 3.73e-25 | 24 |
heart rudiment | 3.73e-25 | 24 |
circulatory system | 6.91e-15 | 112 |
compound organ | 1.83e-14 | 68 |
splanchnic layer of lateral plate mesoderm | 1.47e-13 | 83 |
epithelial tube | 3.78e-12 | 117 |
valve | 1.09e-11 | 3 |
cardiac mesenchyme | 1.09e-11 | 3 |
cardial valve | 1.09e-11 | 3 |
tunica intima | 1.09e-11 | 3 |
heart layer | 1.09e-11 | 3 |
endocardium | 1.09e-11 | 3 |
endocardial cushion | 1.09e-11 | 3 |
presumptive endocardium | 1.09e-11 | 3 |
cardiac chamber | 1.49e-11 | 3 |
blood vessel layer | 7.67e-11 | 7 |
cardiovascular system | 9.17e-10 | 109 |
pulmonary valve | 1.74e-09 | 1 |
semi-lunar valve | 1.74e-09 | 1 |
left cardiac atrium | 1.89e-09 | 1 |
mitral valve | 2.60e-09 | 1 |
heart left ventricle | 3.88e-09 | 1 |
cardiac ventricle | 3.88e-09 | 1 |
future cardiac ventricle | 3.88e-09 | 1 |
tube | 2.71e-07 | 192 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.27e-16 | 2 |
vascular disease | 5.31e-09 | 1 |
ischemia | 5.31e-09 | 1 |
extrinsic cardiomyopathy | 5.31e-09 | 1 |
myocardial ischemia | 5.31e-09 | 1 |
myocardial infarction | 5.31e-09 | 1 |
cardiovascular system disease | 9.20e-09 | 4 |