FFCP PHASE1:Hg19::chr4:139936055..139936069,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1422 | |||
|description=CAGE_peak_at_chr4:139936055..139936069,+ | |||
|id=chr4:139936055..139936069,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.71e-34!42;CL:0000860!3.58e-31!45;CL:0002194!3.15e-22!63;CL:0000576!3.15e-22!63;CL:0000040!3.15e-22!63;CL:0000559!3.15e-22!63;CL:0000839!2.13e-21!70;CL:0002009!2.30e-21!65;CL:0000557!5.19e-21!71;CL:0000766!3.17e-19!76;CL:0000763!3.20e-12!112;CL:0000049!3.20e-12!112;CL:0002031!1.89e-10!124;CL:0002087!4.73e-10!119;CL:0000738!1.90e-09!140;CL:1000306!1.76e-07!4;CL:0002547!1.76e-07!4;CL:0002032!4.20e-07!165;CL:0000837!4.20e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.25e-57;33!CL:0002057;1.25e-57;33!CL:0000473;3.33e-44;39!CL:0000234;3.33e-44;39!CL:0000576;5.59e-30;48!CL:0000766;6.27e-19;69!CL:0000763;2.13e-10;100!CL:0002087;3.54e-10;104!CL:0000136;6.07e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.90e-56,42;CL:0002057,3.90e-56,42;CL:0000473,2.21e-54,48;CL:0000234,2.21e-54,48;CL:0002194,7.53e-43,59;CL:0000576,7.53e-43,59;CL:0000040,7.53e-43,59;CL:0000559,7.53e-43,59;CL:0000839,2.67e-42,66;CL:0000557,1.26e-41,67;CL:0002009,2.32e-41,61;CL:0000766,1.53e-38,72;CL:0000763,1.17e-24,108;CL:0000049,1.17e-24,108;CL:0002031,7.31e-22,120;CL:0002087,1.55e-20,115;CL:0000738,6.82e-19,136;CL:0002032,2.01e-15,161;CL:0000837,2.01e-15,161;CL:0000037,1.24e-14,168;CL:0000988,1.04e-13,177;CL:0000136,1.24e-08,15;CL:0000134,1.49e-08,354;CL:0002320,2.63e-08,361;CL:0000048,4.01e-08,427;CL:0000723,5.96e-08,433;CL:0000034,9.95e-08,441;CL:0000219,1.95e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.78e-37;42!CL:0000049;5.63e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.87e-18!80;UBERON:0001474!2.80e-16!86;UBERON:0002193!3.74e-16!112;UBERON:0004765!1.38e-15!101;UBERON:0001434!1.38e-15!101;UBERON:0002405!2.88e-14!115;UBERON:0002390!4.76e-14!102;UBERON:0003061!4.76e-14!102;UBERON:0002204!1.70e-08!167;UBERON:0003081!3.00e-08!216;UBERON:0000415!1.76e-07!4;UBERON:0007240!1.76e-07!4;UBERON:0005742!1.76e-07!4;UBERON:0005734!1.76e-07!4;UBERON:0004664!1.76e-07!4;UBERON:0004663!1.76e-07!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.33e-36,76;UBERON:0002405,1.02e-35,93;UBERON:0001474,1.76e-33,82;UBERON:0002193,2.70e-30,108;UBERON:0004765,3.13e-30,90;UBERON:0002390,1.66e-27,98;UBERON:0003061,1.66e-27,98;UBERON:0001434,6.84e-27,100;UBERON:0002204,9.63e-15,167;UBERON:0003081,1.69e-11,203;UBERON:0002384,5.71e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0.651032612147555,0,0,0,0,0,0,0,0,0,1.7261543539329,0.768482119587302,3.54723344832878,9.99762474136194,9.03678557017357,10.8341189275473,0,0,0.674170453335254,14.3859429414324,13.4790191371959,13.4260796417799,0,0.199463657621632,0,17.7027635563436,4.53908179752912,7.4738669879469,1.00499466102697,1.0429658368404,2.6062661364614,11.502590550034,27.9891003350549,27.8486900947978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87676382089396,1.38895653772983,0.570762456703795,0,0,0,0,0,0,0.503946384596579,0,0,0,0,1.47798971368783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0.450970258243478,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,6.52821364043369,10.027595760908,39.5185794024865,14.4263957512314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:139936055..139936069,+ | |||
}} |
Revision as of 03:09, 22 January 2014
Short description: | p@chr4:139936055..139936069, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:139936055..139936069, + |
Coexpression cluster: | C1422_mature_CD14_Mast_Eosinophils_immature_heart_Neutrophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.90e-56 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.90e-56 | 42 |
defensive cell | 2.21e-54 | 48 |
phagocyte | 2.21e-54 | 48 |
monopoietic cell | 7.53e-43 | 59 |
monocyte | 7.53e-43 | 59 |
monoblast | 7.53e-43 | 59 |
promonocyte | 7.53e-43 | 59 |
myeloid lineage restricted progenitor cell | 2.67e-42 | 66 |
granulocyte monocyte progenitor cell | 1.26e-41 | 67 |
macrophage dendritic cell progenitor | 2.32e-41 | 61 |
myeloid leukocyte | 1.53e-38 | 72 |
myeloid cell | 1.17e-24 | 108 |
common myeloid progenitor | 1.17e-24 | 108 |
hematopoietic lineage restricted progenitor cell | 7.31e-22 | 120 |
nongranular leukocyte | 1.55e-20 | 115 |
leukocyte | 6.82e-19 | 136 |
hematopoietic oligopotent progenitor cell | 2.01e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-15 | 161 |
hematopoietic stem cell | 1.24e-14 | 168 |
hematopoietic cell | 1.04e-13 | 177 |
fat cell | 1.24e-08 | 15 |
mesenchymal cell | 1.49e-08 | 354 |
connective tissue cell | 2.63e-08 | 361 |
multi fate stem cell | 4.01e-08 | 427 |
somatic stem cell | 5.96e-08 | 433 |
stem cell | 9.95e-08 | 441 |
motile cell | 1.95e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.33e-36 | 76 |
immune system | 1.02e-35 | 93 |
bone element | 1.76e-33 | 82 |
hemolymphoid system | 2.70e-30 | 108 |
skeletal element | 3.13e-30 | 90 |
hematopoietic system | 1.66e-27 | 98 |
blood island | 1.66e-27 | 98 |
skeletal system | 6.84e-27 | 100 |
musculoskeletal system | 9.63e-15 | 167 |
lateral plate mesoderm | 1.69e-11 | 203 |
connective tissue | 5.71e-08 | 371 |