FFCP PHASE1:Hg19::chr4:103748024..103748035,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7323 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12476 | |||
|TSSclassifier=strong | |||
|UniProt=D6R9F6 | |||
|association_with_transcript=0bp_to_ENST00000502563_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_11_at_UBE2D3_5end | |||
|id=chr4:103748024..103748035,- | |||
|ontology_enrichment_celltype=CL:0002057!1.74e-24!42;CL:0000766!1.30e-20!76;CL:0000860!3.55e-20!45;CL:0000048!6.56e-18!430;CL:0002371!6.80e-18!591;CL:0000034!1.88e-17!444;CL:0000723!2.02e-17!436;CL:0002009!4.12e-16!65;CL:0000144!4.57e-16!625;CL:0000557!7.72e-16!71;CL:0002194!1.50e-15!63;CL:0000576!1.50e-15!63;CL:0000040!1.50e-15!63;CL:0000559!1.50e-15!63;CL:0000839!7.21e-15!70;CL:0002320!9.96e-15!365;CL:0000738!3.14e-14!140;CL:0000134!4.32e-13!358;CL:0000219!3.04e-10!390;CL:0002087!7.39e-10!119;CL:0002031!7.42e-10!124;CL:0000763!4.10e-09!112;CL:0000049!4.10e-09!112;CL:0000548!4.72e-09!679;CL:0000004!4.72e-09!679;CL:0000255!4.72e-09!679;CL:0000012!4.83e-09!682;CL:0000003!4.85e-08!722;CL:0000988!3.75e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.81e-20;33!CL:0002057;5.81e-20;33!CL:0000576;2.89e-15;48!CL:0000473;2.05e-14;39!CL:0000234;2.05e-14;39!CL:0000766;7.19e-12;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.56e-24,42;CL:0002057,1.56e-24,42;CL:0000766,1.22e-23,72;CL:0000473,9.69e-22,48;CL:0000234,9.69e-22,48;CL:0000048,2.47e-19,427;CL:0002009,5.98e-19,61;CL:0000034,6.56e-19,441;CL:0000723,7.27e-19,433;CL:0000557,1.46e-18,67;CL:0002194,2.23e-18,59;CL:0000576,2.23e-18,59;CL:0000040,2.23e-18,59;CL:0000559,2.23e-18,59;CL:0000839,2.24e-17,66;CL:0000738,6.26e-16,136;CL:0002320,1.13e-15,361;CL:0000134,5.60e-14,354;CL:0002087,2.67e-11,115;CL:0002031,3.06e-11,120;CL:0000219,5.44e-11,386;CL:0000763,1.41e-10,108;CL:0000049,1.41e-10,108;CL:0000988,5.82e-08,177;CL:0002032,1.39e-07,161;CL:0000837,1.39e-07,161;CL:0000037,1.78e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;4.11e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.53e-20!112;UBERON:0002390!6.24e-20!102;UBERON:0003061!6.24e-20!102;UBERON:0002204!4.63e-19!167;UBERON:0002371!4.01e-15!80;UBERON:0003081!9.97e-15!216;UBERON:0002384!1.37e-14!375;UBERON:0004765!1.94e-14!101;UBERON:0001434!1.94e-14!101;UBERON:0001474!2.33e-13!86;UBERON:0002405!1.30e-11!115;UBERON:0000926!1.74e-10!448;UBERON:0004120!1.74e-10!448;UBERON:0006603!1.74e-10!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.04e-23,108;UBERON:0002204,1.37e-22,167;UBERON:0002390,1.96e-22,98;UBERON:0003061,1.96e-22,98;UBERON:0000926,4.40e-19,315;UBERON:0004120,4.40e-19,315;UBERON:0006603,4.40e-19,315;UBERON:0002405,4.09e-18,93;UBERON:0001434,1.19e-17,100;UBERON:0002371,1.48e-17,76;UBERON:0003081,3.62e-17,203;UBERON:0004765,3.95e-17,90;UBERON:0002384,1.61e-15,371;UBERON:0001474,1.73e-15,82 | |||
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| |||
|short_description=p11@UBE2D3 | |||
}} |
Revision as of 02:32, 22 January 2014
Short description: | p11@UBE2D3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_UBE2D3_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000502563_5end |
EntrezGene: | UBE2D3 |
HGNC: | 12476 |
UniProt: | D6R9F6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.56e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.56e-24 | 42 |
myeloid leukocyte | 1.22e-23 | 72 |
defensive cell | 9.69e-22 | 48 |
phagocyte | 9.69e-22 | 48 |
multi fate stem cell | 2.47e-19 | 427 |
macrophage dendritic cell progenitor | 5.98e-19 | 61 |
stem cell | 6.56e-19 | 441 |
somatic stem cell | 7.27e-19 | 433 |
granulocyte monocyte progenitor cell | 1.46e-18 | 67 |
monopoietic cell | 2.23e-18 | 59 |
monocyte | 2.23e-18 | 59 |
monoblast | 2.23e-18 | 59 |
promonocyte | 2.23e-18 | 59 |
myeloid lineage restricted progenitor cell | 2.24e-17 | 66 |
leukocyte | 6.26e-16 | 136 |
connective tissue cell | 1.13e-15 | 361 |
mesenchymal cell | 5.60e-14 | 354 |
nongranular leukocyte | 2.67e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 3.06e-11 | 120 |
motile cell | 5.44e-11 | 386 |
myeloid cell | 1.41e-10 | 108 |
common myeloid progenitor | 1.41e-10 | 108 |
hematopoietic cell | 5.82e-08 | 177 |
hematopoietic oligopotent progenitor cell | 1.39e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.39e-07 | 161 |
hematopoietic stem cell | 1.78e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.04e-23 | 108 |
musculoskeletal system | 1.37e-22 | 167 |
hematopoietic system | 1.96e-22 | 98 |
blood island | 1.96e-22 | 98 |
mesoderm | 4.40e-19 | 315 |
mesoderm-derived structure | 4.40e-19 | 315 |
presumptive mesoderm | 4.40e-19 | 315 |
immune system | 4.09e-18 | 93 |
skeletal system | 1.19e-17 | 100 |
bone marrow | 1.48e-17 | 76 |
lateral plate mesoderm | 3.62e-17 | 203 |
skeletal element | 3.95e-17 | 90 |
connective tissue | 1.61e-15 | 371 |
bone element | 1.73e-15 | 82 |