FFCP PHASE1:Hg19::chr4:89680146..89680156,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10144 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19367 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=160bp_to_ENST00000515155_5end | |||
|description=CAGE_peak_36_at_FAM13A_5end | |||
|id=chr4:89680146..89680156,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.81e-45;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!3.68e-49!22;UBERON:0001950!2.03e-47!20;UBERON:0001893!2.60e-44!34;UBERON:0000956!4.61e-43!25;UBERON:0000203!4.61e-43!25;UBERON:0001869!2.22e-42!32;UBERON:0005743!7.51e-42!86;UBERON:0001049!2.85e-41!57;UBERON:0005068!2.85e-41!57;UBERON:0006241!2.85e-41!57;UBERON:0007135!2.85e-41!57;UBERON:0001017!5.57e-41!82;UBERON:0002791!7.72e-41!33;UBERON:0002616!1.04e-39!59;UBERON:0002020!1.49e-39!34;UBERON:0003528!1.49e-39!34;UBERON:0000955!5.01e-39!69;UBERON:0006238!5.01e-39!69;UBERON:0000073!2.41e-37!94;UBERON:0001016!2.41e-37!94;UBERON:0002780!3.51e-36!41;UBERON:0001890!3.51e-36!41;UBERON:0006240!3.51e-36!41;UBERON:0003080!3.10e-35!42;UBERON:0003075!1.18e-30!86;UBERON:0007284!1.18e-30!86;UBERON:0002346!4.81e-29!90;UBERON:0003056!8.38e-26!61;UBERON:0007023!1.83e-25!115;UBERON:0001872!6.30e-24!5;UBERON:0000033!3.02e-23!123;UBERON:0000153!6.84e-22!129;UBERON:0007811!6.84e-22!129;UBERON:0004121!3.91e-18!169;UBERON:0000924!1.43e-17!173;UBERON:0006601!1.43e-17!173;UBERON:0002021!3.36e-15!5;UBERON:0000200!1.09e-12!6;UBERON:0000025!2.06e-10!194;UBERON:0001871!8.83e-10!7;UBERON:0004733!1.30e-09!12;UBERON:0002028!1.30e-09!12;UBERON:0007277!1.30e-09!12;UBERON:0000064!1.63e-09!219;UBERON:0002298!4.56e-09!8;UBERON:0004732!7.47e-09!13;UBERON:0003076!1.24e-07!15;UBERON:0003057!1.24e-07!15;UBERON:0004111!2.69e-07!241;UBERON:0002771!2.80e-07!3;UBERON:0000483!4.54e-07!309;UBERON:0000119!6.11e-07!312;UBERON:0001896!9.88e-07!3;UBERON:0005290!9.88e-07!3;UBERON:0010096!9.88e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.85e-23;6!UBERON:0002680;9.73e-16;9!UBERON:0001895;9.73e-16;9!UBERON:0004733;4.54e-12;12!UBERON:0002028;4.54e-12;12!UBERON:0004732;3.21e-11;13!UBERON:0001872;6.55e-08;5!UBERON:0001016;2.20e-07;83!UBERON:0001950;2.86e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.86e-23,6;UBERON:0006215,4.86e-23,6;UBERON:0002680,9.73e-16,9;UBERON:0001895,9.73e-16,9;UBERON:0010092,9.73e-16,9;UBERON:0000955,2.81e-12,68;UBERON:0006238,2.81e-12,68;UBERON:0004733,4.54e-12,12;UBERON:0002028,4.54e-12,12;UBERON:0007277,4.54e-12,12;UBERON:0004732,3.21e-11,13;UBERON:0001017,2.00e-10,81;UBERON:0000073,2.28e-10,53;UBERON:0002616,2.28e-10,53;UBERON:0003076,7.41e-10,15;UBERON:0003057,7.41e-10,15;UBERON:0001049,7.51e-10,56;UBERON:0005068,7.51e-10,56;UBERON:0006241,7.51e-10,56;UBERON:0007135,7.51e-10,56;UBERON:0001016,1.91e-09,89;UBERON:0001872,6.13e-08,5;UBERON:0001950,2.86e-07,20;UBERON:0003075,6.43e-07,82;UBERON:0007284,6.43e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,1.99613798001194,0,0,0,0,0,0,0.344743373241465,0,0,0,0,1.52581736317083,2.54332297841817,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0.366078794705889,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0.319267718114302,0.205116364240755,0.504143392443436,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,1.56215619722769,0.413373593002368,0.253663240775627,0.546974809018219,0,0,0,0,0,0,0,0,0.177404740325278,0,0.171488009437418,0.203909198930495,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.203974470572744,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p36@FAM13A | |||
}} |
Revision as of 02:14, 22 January 2014
Short description: | p36@FAM13A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_FAM13A_5end |
Coexpression cluster: | NA |
Association with transcript: | 160bp_to_ENST00000515155_5end |
EntrezGene: | FAM13A |
HGNC: | 19367 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.86e-23 | 6 |
rhombic lip | 4.86e-23 | 6 |
regional part of metencephalon | 9.73e-16 | 9 |
metencephalon | 9.73e-16 | 9 |
future metencephalon | 9.73e-16 | 9 |
brain | 2.81e-12 | 68 |
future brain | 2.81e-12 | 68 |
segmental subdivision of hindbrain | 4.54e-12 | 12 |
hindbrain | 4.54e-12 | 12 |
presumptive hindbrain | 4.54e-12 | 12 |
segmental subdivision of nervous system | 3.21e-11 | 13 |
central nervous system | 2.00e-10 | 81 |
regional part of nervous system | 2.28e-10 | 53 |
regional part of brain | 2.28e-10 | 53 |
posterior neural tube | 7.41e-10 | 15 |
chordal neural plate | 7.41e-10 | 15 |
neural tube | 7.51e-10 | 56 |
neural rod | 7.51e-10 | 56 |
future spinal cord | 7.51e-10 | 56 |
neural keel | 7.51e-10 | 56 |
nervous system | 1.91e-09 | 89 |
parietal lobe | 6.13e-08 | 5 |
neocortex | 2.86e-07 | 20 |
neural plate | 6.43e-07 | 82 |
presumptive neural plate | 6.43e-07 | 82 |