FFCP PHASE1:Hg19::chr4:89299964..89299986,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55008 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26072 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IVU3 | |||
|association_with_transcript=-28bp_to_ENST00000264346_5end | |||
|coexpression_cluster_id=C678 | |||
|description=CAGE_peak_3_at_HERC6_5end | |||
|id=chr4:89299964..89299986,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.93e-07!18;CL:0000789!3.93e-07!18;CL:0002420!3.93e-07!18;CL:0002419!3.93e-07!18;CL:0000790!3.93e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000898;1.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000898,1.99e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.64e-14!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;2.42e-07;3!UBERON:0000946;2.42e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000974,1.27e-07,10;UBERON:0003978,1.28e-07,3;UBERON:0009751,1.28e-07,3;UBERON:0000946,1.28e-07,3;UBERON:0002523,1.28e-07,3;UBERON:0005983,1.28e-07,3;UBERON:0002165,1.28e-07,3;UBERON:0002062,1.28e-07,3;UBERON:0007280,1.28e-07,3 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.572471974262113,0,0,0.458480434487708,0.328402357799783,0.236132343941038,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0,0,0.434021741431704,0.223915474239924,0.32389366601898,0,0,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0.709446689665756,0.344745680736619,0,0,0,0,0,1.22433556948361,1.28371610830437,0,0.659702600373432,0.398927315243264,0.426224750532694,5.22376629531451,2.26954089876456,3.11411124497787,0,0.521482918420201,0,10.2917915447673,3.68277635987565,5.37986058649504,0,0.212604299965044,0.419317291016752,0.22465726229299,0.450530678524519,0.16072558669708,0,0.39783335439818,0.91332076882317,1.75996244461323,0.546138611262131,0,0,0,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,1.37696839079683,0.786021525498329,0.411202997999018,1.17030546773475,2.28145586643513,2.36723902867367,3.89653456815823,1.44833593950726,1.17842362989935,0.443067789167242,1.08321545506006,0.896639238079726,1.8208308658383,0.822189523018381,0.552700035571697,0,0.741432815810302,0.802622484269139,0,0,1.14966148080576,1.37450978193052,1.01207876807801,0.637130828648193,2.60433381542567,0.950452044448374,0.150575119077773,0.639933055772092,0,1.4206635122641,0.821127996921047,0.403213486449465,1.06976078313403,0.868946423296794,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0,1.37528029272598,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0,0.576175924479999,0,0,0,0.149448680551801,0,0,0,0.204154171254893,0.245668634623536,0,21.384051431077,2.71993622206413,0,0,0,0,0.554128230968366,0,0,3.30523729594513,0,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0.252433774244115,0.184099797284599,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0.10366105501537,0,0,3.12899064659632,3.21620469096443,0,0.928735856063958,0.721879481669586,0.828147600278907,0.674338760312407,0.723033089650446,1.43382164552112,0.217879444092406,0.237270619111097,0.539325232640658,0.784885860501384,0,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.171567810298526,0.109750285408626,0,0.804231779293047,0,0,0,0,0,0.117408694235822,0.577465791044295,0,0,0,0,0.492434012174795,0.468008530278475,0.148631162288728,0,0.839910640994298,1.55952606966625,0.268675568108545,0.290633938513962,0,0,0.088048434013226,0.207328115540772,0.576479813667846,0.37872730027914,0.063497894292169,0.381988425558278,2.34434894420094,0,0.411309970813294,0.300343057843917,3.14409075893636,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.579125226670317,0,0,0,0.394061520403854,0.862510299438069,1.02674429023799,0,0,0,0,0,0,0,0.828831026872071,0.12269149171914,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.521301686808497,0,0,0.206768026122887,0.431428401637234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,1.54209693802656,0.177561725313127,0.739144404124282,2.07701771673448,0.581051892299796,0,0,0,0.114814448164607,0,0.655622074797121,0,0.231046011313244,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0.784306353074702,0,0,0,0.515205058238611,0.183138929636687,0.082509499920588,0.574265537996172,0.650060246036521,1.6068392984416,0.290012154876366,0,0,0,0.429680979473094,0.145016693914229,0.170453254832202,0,0,0,0,0,0,0,0,17.8659476502132,0.532306030317022,0,0,0.286249773483982,0.372158369359667,0.316379424718726,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,25.1024894320223,0,0,0,1.13008116620243,0,0,3.94605796728386,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,2.53329162357197,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0.229723400206959,1.01489521846434,0.764637207142375,2.27858874869665,0.476463550915578,0.411362273086194,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0.684704037099577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,1.46508179271894,0,0,0,0,0,0,0,0.140669416410513,0.890469640183247,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0,0,0,0.269605053441981,0.358042349351218,0,0.591860433821602,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0.241192877250816,0,0.110579259931225,0.886642856860642,0.438770794307945,0,0.41827123283581,1.53900517007594,0,0,0,0,0.638002319463839,0.183195186803725,0.533034776018635,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.404406797884062,0.802577647298789,0.468528891450678,0,0.19566461893209,0.242780379534093,0,0,0,1.45329133145522,2.70582154946087,0,0,0,0,0,0.284609546029793,0.138674673013139,0.347119476670262,0.489961987071888,0.174118413160805,2.27144668714639,0.171986032471617,0,0.146178634172371,0.0821154570532092,2.133758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| |||
|short_description=p3@HERC6 | |||
}} |
Revision as of 02:13, 22 January 2014
Short description: | p3@HERC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HERC6_5end |
Coexpression cluster: | C678_Smooth_CD14_embryonic_mesothelioma_gall_Fibroblast_meningioma |
Association with transcript: | -28bp_to_ENST00000264346_5end |
EntrezGene: | HERC6 |
HGNC: | 26072 |
UniProt: | Q8IVU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
naive T cell | 1.99e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neck | 1.27e-07 | 10 |
valve | 1.28e-07 | 3 |
cardiac mesenchyme | 1.28e-07 | 3 |
cardial valve | 1.28e-07 | 3 |
tunica intima | 1.28e-07 | 3 |
heart layer | 1.28e-07 | 3 |
endocardium | 1.28e-07 | 3 |
endocardial cushion | 1.28e-07 | 3 |
presumptive endocardium | 1.28e-07 | 3 |