FFCP PHASE1:Hg19::chr4:78558101..78558113,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C812 | |||
|description=CAGE_peak_at_chr4:78558101..78558113,- | |||
|id=chr4:78558101..78558113,- | |||
|ontology_enrichment_celltype=CL:0000066!2.85e-25!254;CL:0002076!2.03e-19!43;CL:0000223!2.65e-17!59;CL:0002368!3.11e-12!13;CL:0000244!7.52e-12!4;CL:0000731!7.52e-12!4;CL:0000220!7.58e-11!246;CL:0002321!1.14e-10!248;CL:0002159!1.09e-09!13;CL:0002166!2.00e-09!3;CL:0002621!3.07e-09!3;CL:0002144!1.64e-08!3;CL:0005020!3.60e-07!6;CL:0002138!3.60e-07!6;CL:0005022!3.60e-07!6;CL:0002251!8.50e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000244;8.53e-34;4!CL:0000731;8.53e-34;4!CL:0002166;3.92e-26;3!CL:0002621;1.08e-25;3!CL:0002159;3.44e-21;14!CL:0000317;2.74e-17;2!CL:1000448;2.74e-17;2!CL:0002308;2.74e-17;2!CL:0002140;2.74e-17;2!CL:0002076;4.65e-11;42!CL:0002368;1.84e-10;13!CL:0002553;9.29e-10;1!CL:0000362;6.68e-09;9!CL:0002077;1.58e-07;34!CL:0000622;1.86e-07;5!CL:0002251;7.94e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,8.18e-34,4;CL:0000731,8.18e-34,4;CL:0002166,3.45e-26,3;CL:0002621,1.34e-25,3;CL:0002159,3.38e-21,14;CL:0000317,3.10e-17,2;CL:1000448,3.10e-17,2;CL:0002308,3.10e-17,2;CL:0002140,3.10e-17,2;CL:0002076,9.25e-15,42;CL:0000066,5.95e-14,253;CL:0000223,9.80e-13,58;CL:0002368,1.73e-10,13;CL:0002553,1.06e-09,1;CL:0000362,6.86e-09,9;CL:0002077,1.84e-08,34;CL:0000622,1.96e-07,5;CL:0002251,8.00e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;2.80e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.08e-09;1!DOID:1357;2.08e-09;1!DOID:5662;2.08e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,1.91e-09,1;DOID:1357,1.91e-09,1;DOID:5662,2.46e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.87e-13!169;UBERON:0000925!9.87e-13!169;UBERON:0006595!9.87e-13!169;UBERON:0005911!5.52e-12!82;UBERON:0000365!1.86e-09!5;UBERON:0001004!2.34e-09!72;UBERON:0001949!3.07e-09!3;UBERON:0001915!1.64e-08!3;UBERON:0001982!1.64e-08!3;UBERON:0002294!1.95e-08!7;UBERON:0001173!1.95e-08!7;UBERON:0004912!1.95e-08!7;UBERON:0005910!7.41e-08!6;UBERON:0001007!1.72e-07!155;UBERON:0001555!1.72e-07!155;UBERON:0007026!1.72e-07!155;UBERON:0001708!3.91e-07!4;UBERON:0001704!3.91e-07!4;UBERON:0003929!4.52e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;2.05e-33;12!UBERON:0000365;4.16e-27;5!UBERON:0001949;1.08e-25;3!UBERON:0005910;1.21e-22;6!UBERON:0001708;9.16e-20;4!UBERON:0008895;9.16e-20;4!UBERON:0005911;1.91e-17;36!UBERON:0002419;2.74e-17;2!UBERON:0007771;2.74e-17;2!UBERON:0003297;2.74e-17;2!UBERON:0001821;2.74e-17;2!UBERON:0003487;2.74e-17;2!UBERON:0001820;2.74e-17;2!UBERON:0011159;6.21e-16;5!UBERON:0004807;2.96e-13;22!UBERON:0003929;2.36e-11;7!UBERON:0003350;5.34e-10;8!UBERON:0001828;5.34e-10;8!UBERON:0001764;2.08e-09;1!UBERON:0001825;2.08e-09;1!UBERON:0010371;2.68e-09;31!UBERON:0011137;1.62e-07;11!UBERON:0010323;1.62e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,4.02e-27,5;UBERON:0001949,1.34e-25,3;UBERON:0005910,1.18e-22,6;UBERON:0001708,8.33e-20,4;UBERON:0008895,8.33e-20,4;UBERON:0002419,3.10e-17,2;UBERON:0007771,3.10e-17,2;UBERON:0003297,3.10e-17,2;UBERON:0001821,3.10e-17,2;UBERON:0003487,3.10e-17,2;UBERON:0001820,3.10e-17,2;UBERON:0005089,3.10e-17,2;UBERON:0005088,3.10e-17,2;UBERON:0011159,5.76e-16,5;UBERON:0010188,2.12e-13,6;UBERON:0002539,2.12e-13,6;UBERON:0008816,2.12e-13,6;UBERON:0005911,1.28e-12,82;UBERON:0004119,1.95e-10,160;UBERON:0000925,1.95e-10,160;UBERON:0006595,1.95e-10,160;UBERON:0004807,2.64e-10,28;UBERON:0003350,5.76e-10,8;UBERON:0001828,5.76e-10,8;UBERON:0001004,1.09e-09,74;UBERON:0001764,1.91e-09,1;UBERON:0001825,1.91e-09,1;UBERON:0010323,1.57e-07,11;UBERON:0003102,6.45e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.516833518338658,0,0.33472061276467,0.805658634218294,2.28081631715554,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02478218224572,4.09119180886252,1.43402297694502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,7.90202054942104,0,0,0.370353780634118,0,0,0,0,0.117408694235822,0.721832238805369,0,0.951270761172991,0,0,0,0,0,3.74935335947108,10.5828740765282,3.82792762554443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61418116849198,0.368323955743585,0,0,0,0,0.0770153371044148,0,0,0.422206515571503,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,2.87132768998086,1.30012049207304,0,0,0,0,0,0,0,0,0,5.2891172915513,0.768760269460425,2.55225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,3.35151137767894,0,0,10.7626343167807,1.68471475667626,2.66058092122005,5.28363820476007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445234820091624,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0.213452994739353,1.79828648623917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72759505875258,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,3.20228299314188,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,1.37190407549935,0,0,0,0.889851215136553,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.85006786546702,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:78558101..78558113,- | |||
}} |
Revision as of 01:47, 22 January 2014
Short description: | p@chr4:78558101..78558113, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:78558101..78558113, - |
Coexpression cluster: | C812_Prostate_Urothelial_Mallassezderived_Sebocyte_Keratinocyte_Gingival_Small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 8.18e-34 | 4 |
urothelial cell | 8.18e-34 | 4 |
epithelial cell of Malassez | 3.45e-26 | 3 |
gingival epithelial cell | 1.34e-25 | 3 |
general ecto-epithelial cell | 3.38e-21 | 14 |
sebum secreting cell | 3.10e-17 | 2 |
epithelial cell of sweat gland | 3.10e-17 | 2 |
epithelial cell of skin gland | 3.10e-17 | 2 |
acinar cell of sebaceous gland | 3.10e-17 | 2 |
endo-epithelial cell | 9.25e-15 | 42 |
epithelial cell | 5.95e-14 | 253 |
endodermal cell | 9.80e-13 | 58 |
respiratory epithelial cell | 1.73e-10 | 13 |
lung fibroblast | 1.06e-09 | 1 |
epidermal cell | 6.86e-09 | 9 |
ecto-epithelial cell | 1.84e-08 | 34 |
acinar cell | 1.96e-07 | 5 |
epithelial cell of alimentary canal | 8.00e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
urothelium | 4.02e-27 | 5 |
gingival epithelium | 1.34e-25 | 3 |
transitional epithelium | 1.18e-22 | 6 |
jaw skeleton | 8.33e-20 | 4 |
splanchnocranium | 8.33e-20 | 4 |
skin gland | 3.10e-17 | 2 |
epidermis gland | 3.10e-17 | 2 |
gland of integumental system | 3.10e-17 | 2 |
sebaceous gland | 3.10e-17 | 2 |
skin sebaceous gland | 3.10e-17 | 2 |
sweat gland | 3.10e-17 | 2 |
sweat gland placode | 3.10e-17 | 2 |
sebaceous gland placode | 3.10e-17 | 2 |
primary subdivision of cranial skeletal system | 5.76e-16 | 5 |
protuberance | 2.12e-13 | 6 |
pharyngeal arch | 2.12e-13 | 6 |
embryonic head | 2.12e-13 | 6 |
endo-epithelium | 1.28e-12 | 82 |
endoderm-derived structure | 1.95e-10 | 160 |
endoderm | 1.95e-10 | 160 |
presumptive endoderm | 1.95e-10 | 160 |
respiratory system epithelium | 2.64e-10 | 28 |
epithelium of mucosa | 5.76e-10 | 8 |
gingiva | 5.76e-10 | 8 |
respiratory system | 1.09e-09 | 74 |
maxillary sinus | 1.91e-09 | 1 |
paranasal sinus | 1.91e-09 | 1 |
cranial skeletal system | 1.57e-07 | 11 |
surface structure | 6.45e-07 | 99 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 1.91e-09 | 1 |
maxillary sinus cancer | 1.91e-09 | 1 |
pleomorphic carcinoma | 2.46e-09 | 1 |