FFCP PHASE1:Hg19::chr4:74736382..74736398,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C773 | |||
|description=CAGE_peak_at_chr4:74736382..74736398,+ | |||
|id=chr4:74736382..74736398,+ | |||
|ontology_enrichment_celltype=CL:0000359!2.54e-22!32;CL:0000192!1.91e-17!42;CL:0000514!1.91e-17!42;CL:0000680!7.52e-17!57;CL:0000056!7.52e-17!57;CL:0000355!7.52e-17!57;CL:0000187!7.24e-15!54;CL:0000183!9.29e-14!59;CL:0000393!1.95e-12!60;CL:0000211!1.95e-12!60;CL:0000222!3.39e-12!119;CL:0002539!7.01e-12!10;CL:0000220!3.96e-10!246;CL:0002321!6.80e-10!248;CL:0000548!2.03e-09!679;CL:0000004!2.03e-09!679;CL:0000255!2.03e-09!679;CL:0000055!2.27e-09!180;CL:0000012!3.36e-09!682;CL:0002371!7.89e-09!591;CL:0002595!2.40e-08!5;CL:0000144!2.45e-07!625;CL:0000003!5.91e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.16e-49;32!CL:0002539;1.52e-28;10!CL:0000192;2.98e-27;43!CL:0002595;1.49e-22;5!CL:0000187;4.36e-14;55!CL:0000393;1.27e-11;61!CL:0000211;1.27e-11;61!CL:0002593;5.02e-10;2!CL:0002596;7.03e-10;2!CL:0002138;2.09e-07;6!CL:0002592;3.45e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.71e-52,32;CL:0000192,1.18e-37,43;CL:0000514,1.18e-37,43;CL:0002539,1.89e-28,10;CL:0000187,2.28e-28,55;CL:0000680,1.20e-26,58;CL:0000056,1.20e-26,58;CL:0000355,1.20e-26,58;CL:0000393,4.26e-25,61;CL:0000211,4.26e-25,61;CL:0002595,1.67e-22,5;CL:0000222,7.49e-16,121;CL:0000048,1.41e-10,427;CL:0000723,2.62e-10,433;CL:0002596,5.26e-10,2;CL:0000034,5.84e-10,441;CL:0002593,6.88e-10,2;CL:0005020,2.05e-07,6;CL:0002138,2.05e-07,6;CL:0005022,2.05e-07,6;CL:0002592,3.01e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;2.98e-27;43!CL:0000355;2.29e-13;58!CL:0005022;2.09e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!1.11e-27!42;UBERON:0003509!1.11e-27!42;UBERON:0004572!1.11e-27!42;UBERON:0004573!2.35e-24!33;UBERON:0004571!2.35e-24!33;UBERON:0000055!9.26e-21!69;UBERON:0001981!1.71e-19!60;UBERON:0007500!1.71e-19!60;UBERON:0004537!1.71e-19!60;UBERON:0006965!1.71e-19!60;UBERON:0002049!1.89e-19!79;UBERON:0007798!1.89e-19!79;UBERON:0004872!8.57e-19!84;UBERON:0004535!2.78e-18!110;UBERON:0001009!2.27e-17!113;UBERON:0000486!8.28e-16!82;UBERON:0001134!4.71e-15!61;UBERON:0002036!4.71e-15!61;UBERON:0003082!4.71e-15!61;UBERON:0002385!3.01e-14!63;UBERON:0001015!3.01e-14!63;UBERON:0000383!3.01e-14!63;UBERON:0003914!1.27e-13!118;UBERON:0004290!8.03e-13!70;UBERON:0000914!2.63e-12!83;UBERON:0002329!2.63e-12!83;UBERON:0003077!2.63e-12!83;UBERON:0003059!2.63e-12!83;UBERON:0007282!2.63e-12!83;UBERON:0009618!2.63e-12!83;UBERON:0007285!2.63e-12!83;UBERON:0000947!4.71e-12!21;UBERON:0010191!4.71e-12!21;UBERON:0004237!7.01e-12!10;UBERON:0004695!7.01e-12!10;UBERON:0002111!7.01e-12!10;UBERON:0004178!7.01e-12!10;UBERON:0000490!2.40e-10!138;UBERON:0001135!1.89e-08!15;UBERON:0003081!2.35e-08!216;UBERON:0003834!2.40e-08!5;UBERON:0001533!2.40e-08!5;UBERON:0000477!3.65e-08!286;UBERON:0002204!5.66e-08!167;UBERON:0004111!6.57e-08!241;UBERON:0005256!1.80e-07!143;UBERON:0001828!4.46e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.48e-37;33!UBERON:0004571;6.48e-37;33!UBERON:0004237;1.52e-28;10!UBERON:0004695;1.52e-28;10!UBERON:0002111;1.52e-28;10!UBERON:0004178;1.52e-28;10!UBERON:0001637;2.88e-25;42!UBERON:0003509;2.88e-25;42!UBERON:0004572;2.88e-25;42!UBERON:0003834;1.49e-22;5!UBERON:0001533;1.49e-22;5!UBERON:0001135;1.39e-18;15!UBERON:0003513;4.82e-16;7!UBERON:0000055;1.99e-15;65!UBERON:0000947;6.89e-13;21!UBERON:0010191;6.89e-13;21!UBERON:0007500;1.27e-12;56!UBERON:0001981;1.27e-12;56!UBERON:0004537;1.27e-12;56!UBERON:0002049;1.11e-10;75!UBERON:0007798;1.11e-10;75!UBERON:0002456;5.02e-10;2!UBERON:0005396;7.03e-10;2!UBERON:0003914;4.37e-08;74!UBERON:0002385;5.04e-08;31!UBERON:0001015;5.04e-08;31!UBERON:0000383;5.04e-08;31!UBERON:0003498;3.45e-07;3!UBERON:0005985;3.45e-07;3!UBERON:0001621;3.45e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,9.06e-41,33;UBERON:0004571,9.06e-41,33;UBERON:0001637,1.14e-38,42;UBERON:0003509,1.14e-38,42;UBERON:0004572,1.14e-38,42;UBERON:0000055,5.80e-30,68;UBERON:0004237,1.89e-28,10;UBERON:0004695,1.89e-28,10;UBERON:0002111,1.89e-28,10;UBERON:0004178,1.89e-28,10;UBERON:0007500,4.10e-26,59;UBERON:0001981,4.10e-26,59;UBERON:0004537,4.10e-26,59;UBERON:0006965,4.10e-26,59;UBERON:0002049,2.11e-25,78;UBERON:0007798,2.11e-25,78;UBERON:0001134,1.30e-24,62;UBERON:0002036,1.30e-24,62;UBERON:0003082,1.30e-24,62;UBERON:0002385,1.08e-23,64;UBERON:0001015,1.08e-23,64;UBERON:0000383,1.08e-23,64;UBERON:0003834,1.67e-22,5;UBERON:0001533,1.67e-22,5;UBERON:0004872,2.71e-21,83;UBERON:0000486,5.10e-21,83;UBERON:0002329,7.05e-21,71;UBERON:0003059,7.05e-21,71;UBERON:0007282,7.05e-21,71;UBERON:0004290,7.05e-21,71;UBERON:0009618,7.05e-21,71;UBERON:0003077,1.60e-20,72;UBERON:0007285,1.60e-20,72;UBERON:0004535,3.55e-20,109;UBERON:0007524,3.57e-20,73;UBERON:0001009,1.78e-19,112;UBERON:0007503,1.43e-18,78;UBERON:0001135,1.60e-18,15;UBERON:0003513,5.23e-16,7;UBERON:0002204,1.52e-15,167;UBERON:0003914,1.41e-13,117;UBERON:0003081,7.53e-13,203;UBERON:0000947,7.61e-13,21;UBERON:0010191,7.61e-13,21;UBERON:0005256,3.49e-10,122;UBERON:0005396,5.26e-10,2;UBERON:0002456,6.88e-10,2;UBERON:0000926,9.54e-09,315;UBERON:0004120,9.54e-09,315;UBERON:0006603,9.54e-09,315;UBERON:0000490,1.32e-08,148;UBERON:0003104,1.40e-07,160;UBERON:0009142,1.40e-07,160;UBERON:0004111,2.08e-07,240;UBERON:0001621,3.01e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,2.01697543935533,3.01347264011988,2.19093027116212,5.36726078669558,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0.236482229888585,1.72372840368309,0,0,0,0,0,1.22433556948361,0,0.639337125799041,0,0,0,2.03146467040009,1.70215567407342,1.24564449799115,0,0,0,0,0.736555271975129,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.44575660953827,0.50133791063589,0.869079113764942,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0.354668382198357,0,3.20246987189115,0.49333509683432,0,0.404132016209064,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0.453728732640084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.09098448236334,0.573609190778008,0,0,0,0,0,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0,0,0,0,0,0,3.3204282985047,3.24089858803628,3.61482889245737,0,0,0.492434012174795,0,0,0.93733833986777,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0.22001485746285,1.68053230485111,0,0.845302752556,0,0,0,0,0,0.285955987316295,0,0.823240336780769,0.325736184293735,0,0,0.301439377059586,0.871533458600294,0,0,0,2.10833939483032,0.239624855491583,0,0,0.289562613335158,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616838775210622,0,0.492762936082855,1.03850885836724,0.464841513839837,0.120859449591622,0,0,0,0,0.131124414959424,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.676695028044854,0,0,0,0,0,0.170453254832202,0,0.826424576804891,0,0.765676274967505,0,0,0.31481234683064,8.3644472419272,4.00443654228915,4.7907542728532,4.34966496037536,4.26245703939016,0.572499546967965,0,0.316379424718726,0,0,0,1.59101623962968,4.70969184119538,0.179872457583315,0,0,5.45892700247953,0,3.79132610615083,0,8.04254515783239,1.05650146756755,0,0.141405431953713,0,2.75682671773062,2.65375590096488,5.26141062304515,0,0,1.42037263873893,0.92947049429925,0,0,0,3.21003946333125,0,1.05553817648832,0.658589785919804,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45056985571008,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.06021705293358,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0.576219191952599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0.298509605773748,0,0,0,0,0,0.686520205190771,0,0.932623203496683,3.84423389973048,0.796483835818512,2.69881867298163,2.17368139626763,0,0,0,0.150257608997218,0,0,0.909243296012797,0.537052785212442,0,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0.818859587550484,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0,0.473328002922261,0.255640214277473,0,0.68732060563215,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0.178553938605658,0,0,0,0,0,0,0,0,0,1.11598505450025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0.215166616178029,0,0.0814032686109745,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:74736382..74736398,+ | |||
}} |
Revision as of 01:36, 22 January 2014
Short description: | p@chr4:74736382..74736398, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:74736382..74736398, + |
Coexpression cluster: | C773_Smooth_mesenchymal_Hair_Lymphatic_Preadipocyte_Aortic_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.71e-52 | 32 |
smooth muscle cell | 1.18e-37 | 43 |
smooth muscle myoblast | 1.18e-37 | 43 |
aortic smooth muscle cell | 1.89e-28 | 10 |
muscle cell | 2.28e-28 | 55 |
muscle precursor cell | 1.20e-26 | 58 |
myoblast | 1.20e-26 | 58 |
multi-potent skeletal muscle stem cell | 1.20e-26 | 58 |
electrically responsive cell | 4.26e-25 | 61 |
electrically active cell | 4.26e-25 | 61 |
smooth muscle cell of the subclavian artery | 1.67e-22 | 5 |
mesodermal cell | 7.49e-16 | 121 |
multi fate stem cell | 1.41e-10 | 427 |
somatic stem cell | 2.62e-10 | 433 |
smooth muscle cell of the carotid artery | 5.26e-10 | 2 |
stem cell | 5.84e-10 | 441 |
smooth muscle cell of the internal thoracic artery | 6.88e-10 | 2 |
lymphangioblast | 2.05e-07 | 6 |
endothelial cell of lymphatic vessel | 2.05e-07 | 6 |
vascular lymphangioblast | 2.05e-07 | 6 |
smooth muscle cell of the coronary artery | 3.01e-07 | 3 |