FFCP PHASE1:Hg19::chr4:48485147..48485178,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=201780 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22980 | |||
|TSSclassifier=strong | |||
|UniProt=Q96EP9 | |||
|association_with_transcript=-181bp_to_ENST00000273861,NM_152679,uc003gyc.2_5end | |||
|coexpression_cluster_id=C102 | |||
|description=CAGE_peak_6_at_SLC10A4_5end | |||
|id=chr4:48485147..48485178,+ | |||
|ontology_enrichment_celltype=CL:0000133!5.86e-08!59;CL:0002319!4.33e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.81e-40;5!CL:0000047;8.10e-26;2!CL:0002321;2.57e-14;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,3.25e-08,59;CL:0000047,1.69e-07,8;CL:0000221,6.51e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:169!1.53e-12!6;DOID:171!1.57e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:169;5.98e-34;6!DOID:171;6.99e-21;10!DOID:3095;4.14e-10;22!DOID:2994;4.14e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,5.98e-34,6;DOID:171,6.99e-21,10;DOID:3095,4.14e-10,22;DOID:2994,4.14e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.85e-33!94;UBERON:0001016!7.85e-33!94;UBERON:0005743!3.59e-24!86;UBERON:0002020!6.52e-24!34;UBERON:0003528!6.52e-24!34;UBERON:0001893!1.16e-23!34;UBERON:0001017!2.12e-23!82;UBERON:0001869!5.48e-22!32;UBERON:0001049!1.17e-21!57;UBERON:0005068!1.17e-21!57;UBERON:0006241!1.17e-21!57;UBERON:0007135!1.17e-21!57;UBERON:0002791!3.66e-21!33;UBERON:0002616!8.65e-21!59;UBERON:0004121!9.64e-20!169;UBERON:0002780!3.76e-19!41;UBERON:0001890!3.76e-19!41;UBERON:0006240!3.76e-19!41;UBERON:0000924!4.01e-19!173;UBERON:0006601!4.01e-19!173;UBERON:0000955!5.68e-19!69;UBERON:0006238!5.68e-19!69;UBERON:0003080!1.26e-18!42;UBERON:0003075!4.16e-18!86;UBERON:0007284!4.16e-18!86;UBERON:0002346!4.37e-17!90;UBERON:0003056!1.35e-15!61;UBERON:0000013!4.87e-15!5;UBERON:0002410!4.87e-15!5;UBERON:0001950!1.25e-14!20;UBERON:0000956!2.88e-14!25;UBERON:0000203!2.88e-14!25;UBERON:0000988!1.59e-13!3;UBERON:0002619!3.20e-13!22;UBERON:0000010!2.06e-12!8;UBERON:0000033!2.23e-12!123;UBERON:0002308!4.93e-12!9;UBERON:0000125!4.93e-12!9;UBERON:0000153!1.42e-11!129;UBERON:0007811!1.42e-11!129;UBERON:0000369!1.98e-10!4;UBERON:0002435!1.98e-10!4;UBERON:0000204!1.98e-10!4;UBERON:0010082!1.98e-10!4;UBERON:0007023!6.92e-10!115;UBERON:0002148!7.39e-10!2;UBERON:0009662!7.39e-10!2;UBERON:0002298!1.33e-08!8;UBERON:0002021!3.28e-08!5;UBERON:0000064!6.70e-08!219;UBERON:0005383!5.03e-07!3;UBERON:0005382!5.03e-07!3;UBERON:0006331!7.80e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.81e-40;5!UBERON:0002410;1.81e-40;5!UBERON:0000010;4.59e-23;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.81e-40,5;UBERON:0002410,1.81e-40,5;UBERON:0000010,4.59e-23,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77866236955724,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33479313369527,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.482385754501632,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476809736941136,0,0,0.141353071433941,0,0,0,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.276697269872462,0,0,0,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,7.97903604335445,0.314531883711793,2.94866023118438,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0.205116364240755,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0.394636641377094,0,0,0,0.471346769748006,0,0.913158720509496,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@SLC10A4 | |||
}} |
Revision as of 00:59, 22 January 2014
Short description: | p6@SLC10A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SLC10A4_5end |
Coexpression cluster: | C102_neuroblastoma_testicular_pituitary_carcinosarcoma_rectum_acantholytic_iPS |
Association with transcript: | -181bp_to_ENST00000273861, NM_152679, uc003gyc.2_5end |
EntrezGene: | SLC10A4 |
HGNC: | 22980 |
UniProt: | Q96EP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 3.25e-08 | 59 |
neuronal stem cell | 1.69e-07 | 8 |
ectodermal cell | 6.51e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.81e-40 | 5 |
autonomic nervous system | 1.81e-40 | 5 |
peripheral nervous system | 4.59e-23 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 5.98e-34 | 6 |
neuroectodermal tumor | 6.99e-21 | 10 |
germ cell and embryonal cancer | 4.14e-10 | 22 |
germ cell cancer | 4.14e-10 | 22 |