FFCP PHASE1:Hg19::chr4:48116540..48116569,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=7294 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12434 | |||
|TSSclassifier=strong | |||
|UniProt=E7EQN8 | |||
|association_with_transcript=0bp_to_ENST00000506073_5end | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_2_at_TXK_5end | |||
|id=chr4:48116540..48116569,- | |||
|ontology_enrichment_celltype=CL:0000625!6.51e-20!11;CL:0000791!2.17e-15!18;CL:0000789!2.17e-15!18;CL:0002420!2.17e-15!18;CL:0002419!2.17e-15!18;CL:0000790!2.17e-15!18;CL:0000738!3.59e-14!140;CL:0002087!7.09e-13!119;CL:0000084!1.24e-11!25;CL:0000827!1.24e-11!25;CL:0000037!1.06e-10!172;CL:0000566!1.06e-10!172;CL:0002031!5.77e-10!124;CL:0000988!1.90e-09!182;CL:0000838!3.42e-09!52;CL:0000542!6.46e-09!53;CL:0000051!6.46e-09!53;CL:0002032!9.98e-09!165;CL:0000837!9.98e-09!165;CL:0000623!2.58e-07!3;CL:0000825!2.58e-07!3;CL:0000842!4.82e-07!3;CL:0000767!5.72e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.44e-40;11!CL:0000791;7.24e-29;18!CL:0000789;7.24e-29;18!CL:0002419;7.24e-29;18!CL:0000084;3.56e-20;25!CL:0000623;4.18e-16;3!CL:0000226;2.00e-15;3!CL:0000842;2.00e-15;3!CL:0000767;3.57e-15;3!CL:0002087;9.60e-08;104!CL:0002393;1.14e-07;6!CL:0002397;1.14e-07;6!CL:0000542;4.21e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.06e-40,11;CL:0000791,6.05e-29,18;CL:0000789,6.05e-29,18;CL:0002420,6.05e-29,18;CL:0002419,6.05e-29,18;CL:0000790,6.05e-29,18;CL:0000084,3.13e-20,25;CL:0000827,3.13e-20,25;CL:0000623,4.19e-16,3;CL:0000825,4.19e-16,3;CL:0000738,7.91e-16,136;CL:0000226,2.00e-15,3;CL:0000842,2.00e-15,3;CL:0000767,3.09e-15,3;CL:0000838,9.60e-15,52;CL:0002087,1.44e-14,115;CL:0000542,2.08e-14,53;CL:0000051,2.08e-14,53;CL:0000037,5.67e-13,168;CL:0000988,5.05e-12,177;CL:0002032,4.45e-10,161;CL:0000837,4.45e-10,161;CL:0002031,1.23e-09,120 | |||
|ontology_enrichment_development_v019=CL:0000790;7.24e-29;18!CL:0000051;4.21e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.18e-18!115;UBERON:0000178!7.15e-18!15;UBERON:0000179!7.15e-18!15;UBERON:0000463!7.15e-18!15;UBERON:0002390!1.22e-12!102;UBERON:0003061!1.22e-12!102;UBERON:0002193!2.34e-12!112;UBERON:0004177!1.18e-08!7;UBERON:0002370!6.57e-07!4;UBERON:0005058!6.57e-07!4;UBERON:0009113!6.57e-07!4;UBERON:0003295!6.57e-07!4;UBERON:0005562!6.57e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.42e-45;15!UBERON:0000179;8.42e-45;15!UBERON:0000463;8.42e-45;15!UBERON:0002390;1.72e-25;32!UBERON:0002193;1.07e-13;42!UBERON:0002106;4.34e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.81e-45,15;UBERON:0000179,7.81e-45,15;UBERON:0000463,7.81e-45,15;UBERON:0002390,1.24e-14,98;UBERON:0003061,1.24e-14,98;UBERON:0002193,7.17e-13,108;UBERON:0002106,4.21e-07,3;UBERON:0004854,4.21e-07,3;UBERON:0009034,4.21e-07,3;UBERON:0002095,4.21e-07,3;UBERON:0004782,4.21e-07,3;UBERON:0003281,4.21e-07,3;UBERON:0009664,4.21e-07,3;UBERON:0002296,4.21e-07,3;UBERON:0005602,4.21e-07,3;UBERON:0001179,4.21e-07,3;UBERON:0006293,4.21e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65401409067589,7.29275856384704,2.94150634300544,0,0,0,0,0,0,2.76997704265939,4.21143339687298,6.51032612147556,0.671746422719773,1.29557466407592,0.257575567634187,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.376484679085209,0.272906150057846,0,0.306083892370903,0,0,0.659702600373432,0,0,0.580418477257168,0,0,0,0,0,1.21079900526674,0,0.316462387440884,0,0,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,1.12101712596307,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.226618685395132,0.383220493601921,0.34362744548263,0.253019692019503,1.91139248594458,3.25541726928209,5.70271226669025,4.36667845325541,5.88738411310325,3.74792179657038,3.07810427657222,3.28451198768419,2.82249440514625,0.534880391567015,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0.174129737299267,0,0.953962497221368,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56919201590938,37.4358444383662,19.4064817373566,29.2622122717826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78950473144085,11.8642810450239,5.87001567918944,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,9.13405696617905,6.117097657139,6.83576624608995,8.33811214102261,4.93634727703433,3.8908398671563,9.72056587028607,7.13812658664843,0,0,0,0,0,0,0.318852545457645,0.798317485731266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.828851746593443,0,0,0,0,0,0,0,0,14.3689855408164,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.442306057399416,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484945082442097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0.458320848023367,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,2.45611048905698,1.41483874589699,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0.336283722218824,0,0,0.79832133146375,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0.617393264863557,1.09279780251979,0,0,0,0,0.297046400327086,0,0,3.94732455515385,2.06265241515447,0,0,0,0,0,0.458729283404541,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0.476128862927481,0.258355639344024,0.31037357147929,0,0,0.202117188958219,0,0,0.606168477131288,0.143444410785353,0,0,0,0,0,0,0.611207220914332,0,0,0.805095174364105,0 | |||
|short_description=p2@TXK | |||
}} |
Revision as of 00:59, 22 January 2014
Short description: | p2@TXK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_2_at_TXK_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 0bp_to_ENST00000506073_5end |
EntrezGene: | TXK |
HGNC: | 12434 |
UniProt: | E7EQN8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.06e-40 | 11 |
mature alpha-beta T cell | 6.05e-29 | 18 |
alpha-beta T cell | 6.05e-29 | 18 |
immature T cell | 6.05e-29 | 18 |
mature T cell | 6.05e-29 | 18 |
immature alpha-beta T cell | 6.05e-29 | 18 |
T cell | 3.13e-20 | 25 |
pro-T cell | 3.13e-20 | 25 |
natural killer cell | 4.19e-16 | 3 |
pro-NK cell | 4.19e-16 | 3 |
leukocyte | 7.91e-16 | 136 |
single nucleate cell | 2.00e-15 | 3 |
mononuclear cell | 2.00e-15 | 3 |
basophil | 3.09e-15 | 3 |
lymphoid lineage restricted progenitor cell | 9.60e-15 | 52 |
nongranular leukocyte | 1.44e-14 | 115 |
lymphocyte | 2.08e-14 | 53 |
common lymphoid progenitor | 2.08e-14 | 53 |
hematopoietic stem cell | 5.67e-13 | 168 |
hematopoietic cell | 5.05e-12 | 177 |
hematopoietic oligopotent progenitor cell | 4.45e-10 | 161 |
hematopoietic multipotent progenitor cell | 4.45e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 1.23e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 7.81e-45 | 15 |
haemolymphatic fluid | 7.81e-45 | 15 |
organism substance | 7.81e-45 | 15 |
hematopoietic system | 1.24e-14 | 98 |
blood island | 1.24e-14 | 98 |
hemolymphoid system | 7.17e-13 | 108 |
spleen | 4.21e-07 | 3 |
gastrointestinal system mesentery | 4.21e-07 | 3 |
stomach region | 4.21e-07 | 3 |
mesentery | 4.21e-07 | 3 |
gastrointestinal system serosa | 4.21e-07 | 3 |
mesentery of stomach | 4.21e-07 | 3 |
gut mesentery | 4.21e-07 | 3 |
dorsal mesentery | 4.21e-07 | 3 |
dorsal mesogastrium | 4.21e-07 | 3 |
peritoneal cavity | 4.21e-07 | 3 |
spleen primordium | 4.21e-07 | 3 |