FFCP PHASE1:Hg19::chr4:44963669..44963674,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C513 | |||
|description=CAGE_peak_at_chr4:44963669..44963674,+ | |||
|id=chr4:44963669..44963674,+ | |||
|ontology_enrichment_celltype=CL:0002368!3.07e-35!13;CL:0002076!9.29e-27!43;CL:0000068!3.33e-23!3;CL:0000069!3.33e-23!3;CL:0000307!3.33e-23!3;CL:0000377!3.33e-23!3;CL:0002202!1.27e-20!9;CL:0002632!1.27e-20!9;CL:0002159!2.47e-20!13;CL:0000223!7.29e-19!59;CL:0000244!2.06e-17!4;CL:0000731!2.06e-17!4;CL:0000066!3.81e-17!254;CL:0000317!1.87e-16!2;CL:1000448!1.87e-16!2;CL:0002308!1.87e-16!2;CL:0002140!1.87e-16!2;CL:0000362!3.45e-15!8;CL:0000240!9.52e-12!6;CL:0000311!9.52e-12!6;CL:0000079!9.52e-12!6;CL:0000237!9.52e-12!6;CL:0000036!9.52e-12!6;CL:0000357!9.52e-12!6;CL:0000114!9.52e-12!6;CL:0002328!8.06e-11!3;CL:0002621!1.26e-10!3;CL:0002336!3.31e-09!1;CL:0002261!3.31e-09!1;CL:0002170!3.31e-09!1;CL:0002327!1.48e-08!4;CL:0000220!2.77e-08!246;CL:0002321!3.46e-08!248;CL:0002077!1.04e-07!33;CL:0000622!4.25e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002336;3.34e-66;1!CL:0002261;3.34e-66;1!CL:0002170;3.34e-66;1!CL:0000317;5.96e-34;2!CL:1000448;5.96e-34;2!CL:0002308;5.96e-34;2!CL:0002140;5.96e-34;2!CL:0000307;2.62e-23;3!CL:0000622;1.71e-14;5!CL:0000240;2.59e-12;6!CL:0000311;2.59e-12;6!CL:0000079;2.59e-12;6!CL:0000237;2.59e-12;6!CL:0000154;2.59e-12;6!CL:0002202;1.04e-08;9!CL:0002632;1.04e-08;9!CL:0000150;1.16e-08;9!CL:0000362;1.16e-08;9!CL:0002076;7.82e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002336,2.39e-66,1;CL:0002261,2.39e-66,1;CL:0002170,2.39e-66,1;CL:0000317,7.05e-34,2;CL:1000448,7.05e-34,2;CL:0002308,7.05e-34,2;CL:0002140,7.05e-34,2;CL:0000068,2.62e-23,3;CL:0000069,2.62e-23,3;CL:0000307,2.62e-23,3;CL:0000377,2.62e-23,3;CL:0000622,1.83e-14,5;CL:0000240,2.45e-12,6;CL:0000311,2.45e-12,6;CL:0000079,2.45e-12,6;CL:0000237,2.45e-12,6;CL:0000036,2.45e-12,6;CL:0000357,2.45e-12,6;CL:0000114,2.45e-12,6;CL:0000154,2.74e-12,6;CL:0002202,1.04e-08,9;CL:0002632,1.04e-08,9;CL:0000150,1.21e-08,9;CL:0000362,1.21e-08,9;CL:0002076,2.04e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000377;2.62e-23;3!CL:0000357;2.59e-12;6!CL:0000114;2.59e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002419!1.87e-16!2;UBERON:0007771!1.87e-16!2;UBERON:0003297!1.87e-16!2;UBERON:0001821!1.87e-16!2;UBERON:0003487!1.87e-16!2;UBERON:0001820!1.87e-16!2;UBERON:0005089!1.87e-16!2;UBERON:0005088!1.87e-16!2;UBERON:0000365!4.78e-14!5;UBERON:0007196!3.27e-13!14;UBERON:0001558!3.27e-13!14;UBERON:0004119!3.82e-12!169;UBERON:0000925!3.82e-12!169;UBERON:0006595!3.82e-12!169;UBERON:0005910!8.52e-12!6;UBERON:0004815!8.06e-11!3;UBERON:0002031!8.06e-11!3;UBERON:0001949!1.26e-10!3;UBERON:0001004!1.99e-10!72;UBERON:0003126!2.89e-10!7;UBERON:0001005!2.89e-10!7;UBERON:0005178!6.27e-10!34;UBERON:0002224!6.27e-10!34;UBERON:0000065!6.90e-10!53;UBERON:0005181!1.27e-09!35;UBERON:0001003!9.54e-09!14;UBERON:0007376!9.54e-09!14;UBERON:0007383!9.54e-09!14;UBERON:0001911!1.48e-08!4;UBERON:0005333!1.48e-08!4;UBERON:0008425!1.48e-08!4;UBERON:0005311!1.48e-08!4;UBERON:0002185!2.49e-08!4;UBERON:0005911!2.53e-07!82;UBERON:0005153!8.84e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;5.96e-34;2!UBERON:0007771;5.96e-34;2!UBERON:0003297;5.96e-34;2!UBERON:0001821;5.96e-34;2!UBERON:0003487;5.96e-34;2!UBERON:0001820;5.96e-34;2!UBERON:0003126;8.16e-11;7!UBERON:0001005;8.16e-11;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,7.05e-34,2;UBERON:0007771,7.05e-34,2;UBERON:0003297,7.05e-34,2;UBERON:0001821,7.05e-34,2;UBERON:0003487,7.05e-34,2;UBERON:0001820,7.05e-34,2;UBERON:0005089,7.05e-34,2;UBERON:0005088,7.05e-34,2;UBERON:0003126,8.16e-11,7;UBERON:0001005,8.16e-11,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.100528972411631,1.48141512253647,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0.871901815541886,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,4.3556393944529,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:44963669..44963674,+ | |||
}} |
Revision as of 00:55, 22 January 2014
Short description: | p@chr4:44963669..44963674, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:44963669..44963674, + |
Coexpression cluster: | C513_Tracheal_Bronchial_squamous_bronchial_Small_oral_medulloblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
buccal mucosa cell | 2.39e-66 | 1 |
endothelial cell of viscerocranial mucosa | 2.39e-66 | 1 |
keratinized cell of the oral mucosa | 2.39e-66 | 1 |
sebum secreting cell | 7.05e-34 | 2 |
epithelial cell of sweat gland | 7.05e-34 | 2 |
epithelial cell of skin gland | 7.05e-34 | 2 |
acinar cell of sebaceous gland | 7.05e-34 | 2 |
duct epithelial cell | 2.62e-23 | 3 |
branched duct epithelial cell | 2.62e-23 | 3 |
tracheal epithelial cell | 2.62e-23 | 3 |
tracheoblast | 2.62e-23 | 3 |
acinar cell | 1.83e-14 | 5 |
stratified squamous epithelial cell | 2.45e-12 | 6 |
keratin accumulating cell | 2.45e-12 | 6 |
stratified epithelial cell | 2.45e-12 | 6 |
keratinizing barrier epithelial cell | 2.45e-12 | 6 |
epithelial fate stem cell | 2.45e-12 | 6 |
stratified epithelial stem cell | 2.45e-12 | 6 |
surface ectodermal cell | 2.45e-12 | 6 |
protein secreting cell | 2.74e-12 | 6 |
epithelial cell of tracheobronchial tree | 1.04e-08 | 9 |
epithelial cell of lower respiratory tract | 1.04e-08 | 9 |
glandular epithelial cell | 1.21e-08 | 9 |
epidermal cell | 1.21e-08 | 9 |
endo-epithelial cell | 2.04e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
skin gland | 7.05e-34 | 2 |
epidermis gland | 7.05e-34 | 2 |
gland of integumental system | 7.05e-34 | 2 |
sebaceous gland | 7.05e-34 | 2 |
skin sebaceous gland | 7.05e-34 | 2 |
sweat gland | 7.05e-34 | 2 |
sweat gland placode | 7.05e-34 | 2 |
sebaceous gland placode | 7.05e-34 | 2 |
trachea | 8.16e-11 | 7 |
respiratory airway | 8.16e-11 | 7 |