FFCP PHASE1:Hg19::chr4:15704734..15704765,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=683 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1118 | |||
|TSSclassifier=strong | |||
|UniProt=A6NC48 | |||
|association_with_transcript=15bp_to_ENST00000382346_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_2_at_BST1_5end | |||
|id=chr4:15704734..15704765,+ | |||
|ontology_enrichment_celltype=CL:0000766!5.51e-37!76;CL:0002194!2.44e-31!63;CL:0000576!2.44e-31!63;CL:0000040!2.44e-31!63;CL:0000559!2.44e-31!63;CL:0002009!7.49e-30!65;CL:0000839!1.08e-29!70;CL:0000557!9.77e-29!71;CL:0002057!3.68e-28!42;CL:0000860!2.25e-24!45;CL:0000763!4.81e-22!112;CL:0000049!4.81e-22!112;CL:0000048!8.72e-22!430;CL:0000034!7.69e-21!444;CL:0000723!8.97e-21!436;CL:0000134!3.53e-16!358;CL:0002320!1.31e-14!365;CL:0000219!1.65e-13!390;CL:0000738!5.12e-13!140;CL:0002087!1.30e-10!119;CL:0000037!5.37e-10!172;CL:0000566!5.37e-10!172;CL:0002031!1.46e-09!124;CL:0000988!1.90e-09!182;CL:0002032!7.70e-09!165;CL:0000837!7.70e-09!165;CL:0002371!1.05e-07!591;CL:0000094!2.98e-07!8;CL:0000081!9.41e-07!11;CL:0002393!9.61e-07!9;CL:0002397!9.61e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-26;33!CL:0002057;1.49e-26;33!CL:0000473;4.27e-26;39!CL:0000234;4.27e-26;39!CL:0000576;3.06e-25;48!CL:0000766;4.72e-21;69!CL:0000763;2.97e-10;100!CL:0000094;5.88e-09;8!CL:0000081;1.07e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.45e-47,72;CL:0002194,1.27e-41,59;CL:0000576,1.27e-41,59;CL:0000040,1.27e-41,59;CL:0000559,1.27e-41,59;CL:0000473,1.20e-40,48;CL:0000234,1.20e-40,48;CL:0002009,2.15e-39,61;CL:0000839,7.75e-38,66;CL:0000557,7.15e-37,67;CL:0000860,4.57e-36,42;CL:0002057,4.57e-36,42;CL:0000763,1.77e-29,108;CL:0000049,1.77e-29,108;CL:0000738,1.19e-21,136;CL:0000048,1.09e-20,427;CL:0000723,1.46e-19,433;CL:0000134,3.35e-19,354;CL:0000034,3.91e-19,441;CL:0002087,8.39e-19,115;CL:0002320,7.81e-18,361;CL:0000037,2.08e-17,168;CL:0000988,1.09e-16,177;CL:0002031,4.00e-16,120;CL:0002032,7.03e-16,161;CL:0000837,7.03e-16,161;CL:0000219,7.06e-15,386;CL:0000094,6.11e-09,8;CL:0000081,1.19e-08,11;CL:0002393,2.77e-08,9;CL:0002397,2.77e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.03e-26;42!CL:0000049;2.02e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.32e-31!112;UBERON:0003081!1.42e-29!216;UBERON:0002390!6.96e-29!102;UBERON:0003061!6.96e-29!102;UBERON:0002371!1.01e-25!80;UBERON:0002405!2.22e-22!115;UBERON:0001474!3.33e-22!86;UBERON:0002204!6.81e-21!167;UBERON:0004765!2.29e-18!101;UBERON:0001434!2.29e-18!101;UBERON:0002384!1.67e-14!375;UBERON:0001009!5.75e-11!113;UBERON:0004535!7.70e-11!110;UBERON:0000926!6.81e-09!448;UBERON:0004120!6.81e-09!448;UBERON:0006603!6.81e-09!448;UBERON:0002049!2.38e-07!79;UBERON:0007798!2.38e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.61e-07;15!UBERON:0000179;1.61e-07;15!UBERON:0000463;1.61e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.34e-37,98;UBERON:0003061,3.34e-37,98;UBERON:0002193,8.53e-37,108;UBERON:0002371,4.37e-32,76;UBERON:0003081,1.37e-31,203;UBERON:0002405,5.20e-30,93;UBERON:0001474,8.42e-28,82;UBERON:0004765,4.67e-23,90;UBERON:0001434,5.98e-21,100;UBERON:0000926,1.79e-19,315;UBERON:0004120,1.79e-19,315;UBERON:0006603,1.79e-19,315;UBERON:0002204,3.69e-18,167;UBERON:0002384,1.16e-17,371;UBERON:0004535,3.39e-08,109;UBERON:0001009,5.19e-08,112;UBERON:0000178,1.68e-07,15;UBERON:0000179,1.68e-07,15;UBERON:0000463,1.68e-07,15 | |||
|phase1_expression=7.08545679155171,4.49611100171065,10.8534891153898,6.00439790118782,6.70441641640932,26.1701557230111,0,0.631719873426831,0.261185628199839,0.737201809504527,0,0,0.263766978228454,0.123766352960047,0,2.01697543935533,0.602694528023977,3.65155045193687,0.975865597581014,0.984968464614303,0.408001382488506,0.626909442956176,2.28988789704845,1.23186982565596,0.753255837568817,0,0,0,40.5165205154371,28.787204857291,46.1352047481906,0,0,0,0,0,3.22960483268332,40.9956602313589,37.3012672294464,36.0238045388314,9.1805344438369,10.0407036465884,11.07574940827,26.0262847415421,27.2070679455943,21.5899814457156,30.215774797739,25.903576945375,29.1123988641397,42.003089279034,45.0842843491217,37.3641923223965,31.0271112662957,31.6287494956075,39.2736811123591,30.495259005902,21.0137735544541,24.2701363200691,29.3840536676066,30.1673285451528,24.9341479061626,45.1896281255801,42.6852227310292,35.3766542942136,34.5348993968015,22.1280237629545,24.912889959823,51.2547277123756,34.9393555341535,39.9627474257415,37.5347691632689,35.7229306907938,24.0511414455072,22.8155709216897,23.8116815960849,35.4323110909155,82.1122293680879,77.7916304919003,89.2027006168795,9.4054205434612,6.36533367037088,11.5078416871719,0,2.18455444504853,0,2.13365111283254,1.20118796110804,1.14950487990897,1.32208974556972,0,0,1.17447437874188,0,0,2.24203425192614,3.16060901730092,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,3.312652619711,1.15187950038977,1.24930726552346,3.07810427657222,0,0,0,0,0,0,0.767175371061182,1.80719576192283,4.51204119572301,1.44846518960824,0,0.973269740605272,1.70162670895322,1.10864698731282,1.49319135678314,1.89919659471683,0,0.370784442784429,0.324547393654683,1.21890816109487,1.72845348674525,5.48528435902286,2.85997455390064,0.74291500265913,0,1.72046919021225,1.04142150482278,0,2.09749718104953,0.550236083880135,0.417989933073621,0.516833518338658,0.71153252537342,4.68608857870538,4.02829317109147,3.80136052859256,3.1728067481262,1.83831540172934,0,0.17859945656816,0,0,0,0,0.366403487860815,75.1148379385561,131.845289810431,0,45.224447604274,8.23098325819768,3.17782033951725,5.16305917347865,2.4826786753885,10.0921968025615,0,2.22000793575444,0.311211035399766,0.269421344139376,0.163461903113459,1.05950199351452,2.30470369792,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0.206651562351531,1.18800285728205,3.70900393917835,0.910161361938026,0.718618141816238,0,0,0.277064115484183,0.877955241761676,0.30648779579902,2.55404700141215,1.58805056424029,1.61450672119976,3.63047560991565,1.69545520927649,0.300091096084402,0.92747276314595,0.772921620136887,1.67505170698431,0.337552664482532,0.292311015483596,0.757301322732344,2.48534726334208,1.45481451136931,2.84007674013291,1.10827308050404,1.3564847384839,0,0,0,0,0.397589304964456,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0.928735856063958,0,0,0,0,0,0,0,0.134831308160164,0,0,1.4763109092493,0,1.2347220339942,1.47008711385542,1.26755034821831,0,2.95394953340702,0,0,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,0,0,1.97081688457631,1.6437217193015,6.0633908059651,12.9635943521451,8.18092854608773,0,0,29.2998237244003,8.89216207529103,23.0378301547529,0,0,0,0,0,0,1.97065295158377,1.23267807618516,0.207328115540772,1.29707958075265,0.6312121671319,0.063497894292169,0.763976851116555,0,0,0.719792448923265,0.901029173531752,0.857479297891735,0.224262168690721,1.30788020649984,0.36669142910475,2.19761916788222,0,0,3.45719551560332,3.12022310734098,0.257207374262142,0,0,0.714889968290738,0,0.823240336780769,0,1.42156779497018,0.791951872933429,6.93310567237048,14.816068796205,8.59767724165691,23.1085183218262,29.1309113030633,16.8667151586425,4.0736225433569,8.04033550838797,0,1.73737568001095,0.821905290201534,0.537182889719687,0,0.591092280605782,0,2.56686072559497,0.76228387266739,0,0,0.502548796003046,0,82.3907726341901,50.8574480646842,116.450759275526,0,0,0,3.95144636908534,2.3195768543631,4.57337003598411,0.702848489956279,0.601892199455438,0,0,2.65690239414175,1.10621501125022,0.695068915744663,0,0,22.1241787951489,19.1985638728569,14.7284029768753,1.21251028578504,0,0.907170879989041,13.397821622214,3.83654933220156,6.17452207752762,26.3966647466744,7.67560873600055,17.3722234835096,20.7785293022987,0,1.59805552781814,0.492762936082855,1.03850885836724,0.581051892299796,0,0.200506470303285,0,2.06666006696292,1.63882051206045,4.85160335349869,0.902399225814824,0.231046011313244,0,0,0.211103257785751,0,1.02056223165909,1.0795795805107,0,0.541892875087706,1.00337954770971,0.254876273045038,0,0.447749509444357,0.219259876645935,0,0,1.31205858279882,0,0.824328093181778,0,0,0,0,9.64103579064957,0.290012154876366,0,0,0,0.107420244868274,0,0.340906509664404,0.356128142586949,0,0,0,0,0.464845549297286,5.35180989612088,0,1.23213432070436,2.12922412126809,0.869932992075073,1.11194531462352,1.86062352764589,0.372158369359667,2.21465597303108,2.2875623270859,0.2558977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| |||
|short_description=p2@BST1 | |||
}} |
Revision as of 00:19, 22 January 2014
Short description: | p2@BST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BST1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 15bp_to_ENST00000382346_5end |
EntrezGene: | BST1 |
HGNC: | 1118 |
UniProt: | A6NC48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.34e-37 | 98 |
blood island | 3.34e-37 | 98 |
hemolymphoid system | 8.53e-37 | 108 |
bone marrow | 4.37e-32 | 76 |
lateral plate mesoderm | 1.37e-31 | 203 |
immune system | 5.20e-30 | 93 |
bone element | 8.42e-28 | 82 |
skeletal element | 4.67e-23 | 90 |
skeletal system | 5.98e-21 | 100 |
mesoderm | 1.79e-19 | 315 |
mesoderm-derived structure | 1.79e-19 | 315 |
presumptive mesoderm | 1.79e-19 | 315 |
musculoskeletal system | 3.69e-18 | 167 |
connective tissue | 1.16e-17 | 371 |
cardiovascular system | 3.39e-08 | 109 |
circulatory system | 5.19e-08 | 112 |
blood | 1.68e-07 | 15 |
haemolymphatic fluid | 1.68e-07 | 15 |
organism substance | 1.68e-07 | 15 |