FFCP PHASE1:Hg19::chr4:15683354..15683368,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285550 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27740 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000515697_5end | |||
|description=CAGE_peak_5_at_FAM200B_5end | |||
|id=chr4:15683354..15683368,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.66e-08!53;CL:0000051!3.66e-08!53;CL:0000838!5.47e-08!52;CL:0000988!2.66e-07!182;CL:0000037!5.63e-07!172;CL:0000566!5.63e-07!172 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.28e-10,53;CL:0000051,6.28e-10,53;CL:0000838,1.04e-09,52;CL:0000988,1.00e-08,177;CL:0000738,1.23e-08,136;CL:0000037,1.30e-08,168;CL:0002032,3.23e-07,161;CL:0000837,3.23e-07,161;CL:0000084,8.01e-07,25;CL:0000827,8.01e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.34e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.38e-35!115;UBERON:0001049!1.17e-24!57;UBERON:0005068!1.17e-24!57;UBERON:0006241!1.17e-24!57;UBERON:0007135!1.17e-24!57;UBERON:0002780!9.38e-22!41;UBERON:0001890!9.38e-22!41;UBERON:0006240!9.38e-22!41;UBERON:0003080!2.19e-20!42;UBERON:0002616!4.91e-19!59;UBERON:0002020!7.06e-18!34;UBERON:0003528!7.06e-18!34;UBERON:0001893!9.50e-18!34;UBERON:0002791!3.86e-17!33;UBERON:0001017!4.18e-17!82;UBERON:0001869!1.14e-16!32;UBERON:0005743!1.54e-16!86;UBERON:0003075!5.63e-16!86;UBERON:0007284!5.63e-16!86;UBERON:0000955!9.08e-16!69;UBERON:0006238!9.08e-16!69;UBERON:0002346!2.29e-15!90;UBERON:0000073!3.97e-14!94;UBERON:0001016!3.97e-14!94;UBERON:0002619!1.61e-13!22;UBERON:0000956!2.04e-12!25;UBERON:0000203!2.04e-12!25;UBERON:0001950!3.29e-12!20;UBERON:0003056!5.44e-12!61;UBERON:0000153!1.39e-09!129;UBERON:0007811!1.39e-09!129;UBERON:0000033!5.14e-08!123;UBERON:0000178!2.97e-07!15;UBERON:0000179!2.97e-07!15;UBERON:0000463!2.97e-07!15;UBERON:0002420!4.04e-07!9;UBERON:0007245!4.04e-07!9;UBERON:0010009!4.04e-07!9;UBERON:0010011!4.04e-07!9;UBERON:0000454!4.04e-07!9;UBERON:0002308!4.64e-07!9;UBERON:0000125!4.64e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.31e-19;41!UBERON:0001890;6.31e-19;41!UBERON:0003528;3.19e-18;34!UBERON:0002020;3.19e-18;34!UBERON:0001893;3.28e-18;34!UBERON:0002791;4.53e-18;32!UBERON:0001869;5.59e-18;32!UBERON:0002619;8.10e-17;22!UBERON:0000073;1.20e-16;53!UBERON:0002616;1.20e-16;53!UBERON:0001950;3.66e-15;20!UBERON:0000956;1.39e-14;25!UBERON:0000203;1.39e-14;25!UBERON:0007023;4.87e-12;114!UBERON:0001017;6.00e-11;75!UBERON:0000955;5.34e-10;68!UBERON:0000178;7.04e-09;15!UBERON:0000179;7.04e-09;15!UBERON:0000463;7.04e-09;15!UBERON:0002420;1.06e-08;9!UBERON:0007245;1.06e-08;9!UBERON:0010009;1.06e-08;9!UBERON:0010011;1.06e-08;9!UBERON:0000454;1.06e-08;9!UBERON:0001016;1.15e-08;83!UBERON:0000125;1.38e-08;9!UBERON:0002308;1.38e-08;9!UBERON:0009663;3.82e-07;7!UBERON:0002390;8.73e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.14e-39,114;UBERON:0001049,7.10e-31,56;UBERON:0005068,7.10e-31,56;UBERON:0006241,7.10e-31,56;UBERON:0007135,7.10e-31,56;UBERON:0000073,4.42e-29,53;UBERON:0002616,4.42e-29,53;UBERON:0002780,2.80e-26,41;UBERON:0001890,2.80e-26,41;UBERON:0003080,2.80e-26,41;UBERON:0006240,2.80e-26,41;UBERON:0001017,3.38e-23,81;UBERON:0000955,7.03e-22,68;UBERON:0006238,7.03e-22,68;UBERON:0003528,2.25e-21,34;UBERON:0002020,2.25e-21,34;UBERON:0001893,3.25e-21,34;UBERON:0001016,4.17e-20,89;UBERON:0002791,6.83e-20,32;UBERON:0001869,7.50e-20,32;UBERON:0003075,5.03e-19,82;UBERON:0007284,5.03e-19,82;UBERON:0002346,1.18e-17,86;UBERON:0002619,1.01e-16,22;UBERON:0001950,4.64e-15,20;UBERON:0003056,9.57e-15,61;UBERON:0000956,1.69e-14,25;UBERON:0000203,1.69e-14,25;UBERON:0010371,2.71e-12,104;UBERON:0010314,1.77e-10,132;UBERON:0000178,8.77e-09,15;UBERON:0000179,8.77e-09,15;UBERON:0000463,8.77e-09,15;UBERON:0002420,1.29e-08,9;UBERON:0007245,1.29e-08,9;UBERON:0010009,1.29e-08,9;UBERON:0010011,1.29e-08,9;UBERON:0000454,1.29e-08,9;UBERON:0000125,1.54e-08,9;UBERON:0002308,1.54e-08,9;UBERON:0009663,4.51e-07,7;UBERON:0004121,6.47e-07,171;UBERON:0000924,6.47e-07,171;UBERON:0006601,6.47e-07,171 | |||
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| |||
|short_description=p5@FAM200B | |||
}} |
Revision as of 00:18, 22 January 2014
Short description: | p5@FAM200B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAM200B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000515697_5end |
EntrezGene: | FAM200B |
HGNC: | 27740 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 6.28e-10 | 53 |
common lymphoid progenitor | 6.28e-10 | 53 |
lymphoid lineage restricted progenitor cell | 1.04e-09 | 52 |
hematopoietic cell | 1.00e-08 | 177 |
leukocyte | 1.23e-08 | 136 |
hematopoietic stem cell | 1.30e-08 | 168 |
hematopoietic oligopotent progenitor cell | 3.23e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.23e-07 | 161 |
T cell | 8.01e-07 | 25 |
pro-T cell | 8.01e-07 | 25 |