FFCP PHASE1:Hg19::chr4:8582208..8582224,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27201 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4528 | |||
|TSSclassifier=strong | |||
|UniProt=B2R7M4,Q96P69 | |||
|association_with_transcript=0bp_to_NM_080819_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_5_at_GPR78_5end | |||
|id=chr4:8582208..8582224,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.03e-32!7;CL:0000586!1.03e-32!7;CL:0002541!5.19e-28!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.42e-17;7!CL:0000586;3.42e-17;7!CL:0002541;1.20e-10;3!CL:0000083;2.26e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.42e-17,7;CL:0000586,3.42e-17,7;CL:0002541,1.20e-10,3;CL:0000083,2.43e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.48e-30;1 | |||
|ontology_enrichment_disease=DOID:1799!1.08e-10!1;DOID:10165!1.08e-10!1;DOID:1798!1.08e-10!1;DOID:3095!2.36e-10!22;DOID:2994!2.36e-10!22 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.37e-29;1!DOID:10165;2.37e-29;1!DOID:1798;2.37e-29;1!DOID:1793;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.16e-29,1;DOID:10165,3.16e-29,1;DOID:1798,3.16e-29,1;DOID:1793,2.43e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000476!5.19e-28!3;UBERON:0000920!5.19e-28!3;UBERON:0003124!2.36e-21!7;UBERON:0005631!8.63e-11!14;UBERON:0000158!8.63e-11!14;UBERON:0001882!3.29e-10!1;UBERON:0005403!3.29e-10!1;UBERON:0002022!4.75e-10!1;UBERON:0001950!6.08e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.20e-10;3!UBERON:0000920;1.20e-10;3!UBERON:0001987;1.70e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003124,3.71e-17,7;UBERON:0000920,1.20e-10,3;UBERON:0005631,4.38e-09,14;UBERON:0000158,4.38e-09,14;UBERON:0001987,1.70e-08,4;UBERON:0004340,1.70e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.50339439602256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37804494041792,2.69272933229316,0.760531603454056,0.638002319463839,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09525355585138,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,11.531308121143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@GPR78 | |||
}} |
Revision as of 00:10, 22 January 2014
Short description: | p5@GPR78 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GPR78_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_NM_080819_5end |
EntrezGene: | GPR78 |
HGNC: | 4528 |
UniProt: | B2R7M4Q96P69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.42e-17 | 7 |
germ cell | 3.42e-17 | 7 |
chorionic membrane mesenchymal stem cell | 1.20e-10 | 3 |
epithelial cell of pancreas | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
chorion | 3.71e-17 | 7 |
egg chorion | 1.20e-10 | 3 |
extraembryonic membrane | 4.38e-09 | 14 |
membranous layer | 4.38e-09 | 14 |
placenta | 1.70e-08 | 4 |
allantois | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.16e-29 | 1 |
endocrine pancreas cancer | 3.16e-29 | 1 |
pancreatic endocrine carcinoma | 3.16e-29 | 1 |
pancreatic cancer | 2.43e-08 | 4 |