FFCP PHASE1:Hg19::chr3:197639921..197639934,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84223 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25251 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-16bp_to_ENST00000485787_5end | |||
|description=CAGE_peak_6_at_IQCG_5end | |||
|id=chr3:197639921..197639934,- | |||
|ontology_enrichment_celltype=CL:0002594!1.84e-09!4;CL:0000453!7.38e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000174;6.96e-13;3!CL:0000134;2.02e-10;55!CL:0002594;2.50e-10;4!CL:0000511;2.74e-10;1!CL:0002625;2.74e-10;1!CL:0002174;2.74e-10;1!CL:0000946;2.74e-10;1!CL:0000222;2.74e-10;1!CL:0000216;2.74e-10;1!CL:0000501;2.74e-10;1!CL:0002379;2.74e-10;1!CL:0000786;2.74e-10;1!CL:0000048;1.29e-08;58!CL:0000723;1.45e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000174,6.97e-13,3;CL:0002379,1.73e-10,1;CL:0000511,1.89e-10,1;CL:0002625,1.89e-10,1;CL:0000216,1.89e-10,1;CL:0002594,2.51e-10,4;CL:0000946,2.74e-10,1;CL:0000786,2.74e-10,1;CL:0000980,2.74e-10,1;CL:0002174,3.01e-10,1;CL:0000501,3.01e-10,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.78e-15!14;DOID:193!9.25e-09!29;DOID:120!5.55e-08!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.65e-41;14!DOID:193;1.98e-24;29!DOID:120;6.58e-21;27!DOID:3620;2.74e-10;1!DOID:3565;2.74e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.48e-41,14;DOID:193,1.98e-24,29;DOID:120,6.42e-21,27;DOID:3620,1.73e-10,1;DOID:3565,1.73e-10,1;DOID:0050686,5.04e-09,137 | |||
|ontology_enrichment_uberon=UBERON:0000992!2.27e-19!13;UBERON:0004176!2.34e-19!22;UBERON:0000991!5.90e-18!21;UBERON:0009196!5.90e-18!21;UBERON:0009117!5.90e-18!21;UBERON:0005564!5.90e-18!21;UBERON:0002323!5.04e-12!46;UBERON:0002118!6.54e-12!5;UBERON:0004532!6.54e-12!5;UBERON:0003886!1.88e-11!63;UBERON:0003133!3.28e-11!48;UBERON:0004458!5.73e-11!49;UBERON:0003134!6.39e-11!37;UBERON:0000474!6.39e-11!37;UBERON:0002553!9.05e-11!70;UBERON:0002119!5.03e-10!4;UBERON:0004531!5.03e-10!4;UBERON:0001310!1.84e-09!4;UBERON:0003100!1.91e-09!41;UBERON:0005156!3.44e-08!59;UBERON:0000990!3.44e-08!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0000992;2.92e-34;13!UBERON:0002118;7.35e-30;5!UBERON:0000991;3.78e-27;21!UBERON:0002119;1.16e-21;4!UBERON:0003134;3.57e-11;33!UBERON:0001310;2.50e-10;4!UBERON:0001136;2.74e-10;1!UBERON:0001343;2.74e-10;1!UBERON:0004910;2.74e-10;1!UBERON:0004813;2.74e-10;1!UBERON:0003133;9.52e-09;44!UBERON:0003100;1.49e-08;41!UBERON:0000474;4.16e-08;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,3.07e-34,13;UBERON:0002118,9.20e-30,5;UBERON:0000991,3.42e-27,21;UBERON:0009196,3.42e-27,21;UBERON:0009117,3.42e-27,21;UBERON:0005564,3.42e-27,21;UBERON:0004176,6.48e-26,22;UBERON:0002119,1.01e-21,4;UBERON:0002323,6.96e-12,46;UBERON:0003134,1.39e-11,37;UBERON:0000474,1.39e-11,37;UBERON:0003133,2.40e-11,48;UBERON:0004458,4.29e-11,49;UBERON:0001136,1.89e-10,1;UBERON:0001343,1.89e-10,1;UBERON:0004910,1.89e-10,1;UBERON:0005154,1.89e-10,1;UBERON:0005295,1.89e-10,1;UBERON:0004813,1.89e-10,1;UBERON:0005297,1.89e-10,1;UBERON:0005294,1.89e-10,1;UBERON:0010141,1.89e-10,1;UBERON:0005891,1.89e-10,1;UBERON:0003100,2.22e-10,41;UBERON:0001310,2.51e-10,4;UBERON:0003886,5.68e-10,54;UBERON:0005156,4.86e-09,59;UBERON:0000990,4.86e-09,59;UBERON:0002553,1.04e-08,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404364963146632,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,3.65238678532867,0.30982349809975,0.845086807596724,0,0,2.1400263088875,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0.494411622680279,0,0,0,0,0.818149460017238,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364909578431332,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,0,0,0,0,0.596143835108969,0,0,0,0,0,0,0,0,0,0.745515213392595,0,0,0,0.101998217636322,0,0,0,0,1.28929632425987,1.57732412567589,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0,0,0,0.767660789277781,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88212655758537,0,0,0,0,0,0,1.0062716070103,0,0,0.151230923763239,0,0,4.46030948058367,0.899606224327209,2.17368139626763,2.90294345488599,0,1.5652351854352,0,0,2.44122439922797,3.09142720644351,0.644463342254931,3.24823631914946,1.19428766609585,0,0,0,1.26184898228651,1.54095864325843,0,0,0,0.926089897295336,0,0,0,0,0.353378291891762,0,0,0,0,0,0.138258436151731,0.389720617678777,0.664324201566815,0.327130788511688,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0.690359926060101,0,0.676892955143315,0,0.781514011233092,0,0,0,0.270150338473579,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.532214220975833,1.38280785066935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0.375935671919414,0.128915775947154,0.0999411559249289,0,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0.126166424835079,0,0,0,0,0,0,0.833565680400634,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0.426909383510862,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p6@IQCG | |||
}} |
Revision as of 23:39, 21 January 2014
Short description: | p6@IQCG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IQCG_5end |
Coexpression cluster: | NA |
Association with transcript: | -16bp_to_ENST00000485787_5end |
EntrezGene: | IQCG |
HGNC: | 25251 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
steroid hormone secreting cell | 6.97e-13 | 3 |
meningothelial cell | 1.73e-10 | 1 |
androgen binding protein secreting cell | 1.89e-10 | 1 |
seminiferous tubule epithelial cell | 1.89e-10 | 1 |
Sertoli cell | 1.89e-10 | 1 |
smooth muscle cell of the umbilical artery | 2.51e-10 | 4 |
antibody secreting cell | 2.74e-10 | 1 |
plasma cell | 2.74e-10 | 1 |
plasmablast | 2.74e-10 | 1 |
follicular cell of ovary | 3.01e-10 | 1 |
granulosa cell | 3.01e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
female gonad | 3.07e-34 | 13 |
right ovary | 9.20e-30 | 5 |
gonad | 3.42e-27 | 21 |
indifferent external genitalia | 3.42e-27 | 21 |
indifferent gonad | 3.42e-27 | 21 |
gonad primordium | 3.42e-27 | 21 |
external genitalia | 6.48e-26 | 22 |
left ovary | 1.01e-21 | 4 |
body cavity | 6.96e-12 | 46 |
female reproductive organ | 1.39e-11 | 37 |
female reproductive system | 1.39e-11 | 37 |
reproductive organ | 2.40e-11 | 48 |
body cavity or lining | 4.29e-11 | 49 |
mesothelium | 1.89e-10 | 1 |
seminiferous tubule of testis | 1.89e-10 | 1 |
epithelium of male gonad | 1.89e-10 | 1 |
epithelial cord | 1.89e-10 | 1 |
sex cord | 1.89e-10 | 1 |
seminiferous tubule epithelium | 1.89e-10 | 1 |
testis sex cord | 1.89e-10 | 1 |
genital ridge | 1.89e-10 | 1 |
primitive sex cord of indifferent gonad | 1.89e-10 | 1 |
coelomic epithelium | 1.89e-10 | 1 |
female organism | 2.22e-10 | 41 |
umbilical artery | 2.51e-10 | 4 |
body cavity precursor | 5.68e-10 | 54 |
reproductive structure | 4.86e-09 | 59 |
reproductive system | 4.86e-09 | 59 |
anatomical cavity | 1.04e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.48e-41 | 14 |
reproductive organ cancer | 1.98e-24 | 29 |
female reproductive organ cancer | 6.42e-21 | 27 |
central nervous system cancer | 1.73e-10 | 1 |
meningioma | 1.73e-10 | 1 |
organ system cancer | 5.04e-09 | 137 |