FFCP PHASE1:Hg19::chr3:183005498..183005526,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15684 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=230bp_to_ENST00000462559,uc003fln.1_5end | |||
|description=CAGE_peak_9_at_B3GNT5_5end | |||
|id=chr3:183005498..183005526,+ | |||
|ontology_enrichment_celltype=CL:0000680!1.30e-12!57;CL:0000056!1.30e-12!57;CL:0000355!1.30e-12!57;CL:0000860!1.23e-11!45;CL:0000187!1.57e-11!54;CL:0000183!1.53e-10!59;CL:0002057!4.44e-10!42;CL:0000393!1.33e-09!60;CL:0000211!1.33e-09!60;CL:0000192!1.39e-09!42;CL:0000514!1.39e-09!42;CL:0000359!2.23e-08!32;CL:0002194!5.07e-08!63;CL:0000576!5.07e-08!63;CL:0000040!5.07e-08!63;CL:0000559!5.07e-08!63;CL:0002009!2.09e-07!65;CL:0000055!5.42e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.62e-18;33!CL:0002057;4.62e-18;33!CL:0000473;9.87e-12;39!CL:0000234;9.87e-12;39!CL:0000576;1.72e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.14e-14,42;CL:0002057,7.14e-14,42;CL:0002194,1.08e-11,59;CL:0000576,1.08e-11,59;CL:0000040,1.08e-11,59;CL:0000559,1.08e-11,59;CL:0000473,2.67e-11,48;CL:0000234,2.67e-11,48;CL:0002009,4.54e-11,61;CL:0000839,1.09e-09,66;CL:0000557,1.94e-09,67;CL:0000766,2.66e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;2.37e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!9.20e-15!70;UBERON:0000914!2.28e-14!83;UBERON:0002329!2.28e-14!83;UBERON:0003077!2.28e-14!83;UBERON:0003059!2.28e-14!83;UBERON:0007282!2.28e-14!83;UBERON:0009618!2.28e-14!83;UBERON:0007285!2.28e-14!83;UBERON:0001134!7.98e-14!61;UBERON:0002036!7.98e-14!61;UBERON:0003082!7.98e-14!61;UBERON:0000486!1.54e-13!82;UBERON:0002385!7.38e-13!63;UBERON:0001015!7.38e-13!63;UBERON:0000383!7.38e-13!63;UBERON:0002204!8.00e-13!167;UBERON:0000923!2.56e-09!604;UBERON:0005291!2.56e-09!604;UBERON:0006598!2.56e-09!604;UBERON:0002532!2.56e-09!604;UBERON:0000926!3.38e-09!448;UBERON:0004120!3.38e-09!448;UBERON:0006603!3.38e-09!448;UBERON:0002050!3.40e-09!605;UBERON:0005423!3.40e-09!605;UBERON:0000922!2.38e-08!612;UBERON:0005256!4.87e-08!143;UBERON:0000490!4.62e-07!138 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.48e-13,167;UBERON:0004765,1.41e-08,90;UBERON:0002371,3.31e-08,76;UBERON:0002329,7.83e-08,71;UBERON:0003059,7.83e-08,71;UBERON:0007282,7.83e-08,71;UBERON:0004290,7.83e-08,71;UBERON:0009618,7.83e-08,71;UBERON:0003077,1.24e-07,72;UBERON:0007285,1.24e-07,72;UBERON:0001434,1.67e-07,100;UBERON:0007524,1.94e-07,73;UBERON:0000926,2.69e-07,315;UBERON:0004120,2.69e-07,315;UBERON:0006603,2.69e-07,315;UBERON:0001134,3.55e-07,62;UBERON:0002036,3.55e-07,62;UBERON:0003082,3.55e-07,62;UBERON:0001474,4.19e-07,82;UBERON:0002385,8.96e-07,64;UBERON:0001015,8.96e-07,64;UBERON:0000383,8.96e-07,64 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,2.52687949370732,0,0,0,0,0,5.19818682432196,0,4.03395087871065,5.42425075221579,0.730310090387373,0.975865597581014,0,0,0,0,0,0.125542639594803,0,0,0,0,0.383829398097213,0,0,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,1.62700325833979,1.23350366406548,1.23882548358041,5.75384784644301,4.35473201099471,4.25668013799453,23.0979606093534,20.6555098746824,12.1883837934908,0.752969358170419,1.63743690034707,0.449446968890169,20.8137046812214,24.069677030707,17.9014395223732,0.329851300186716,0.598390972864896,0,11.8985787837719,14.7520158419696,6.22822248995575,3.01498398308092,5.21482918420201,5.86409880703815,10.8971910474006,15.8359383474653,11.076183560431,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0.378139268656271,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,1.19257444420023,0,0,0,3.35599548967925,0,0,0,0,0.33472061276467,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0.397227542439656,0,0,0.560677600142307,1.06748995729705,0.49333509683432,0.622422070799533,1.75123873690594,0.163461903113459,0.756787138224657,2.30470369792,6.56100009134631,5.30672130611545,2.2818872861778,4.33401173600223,0.822041490506354,0.161872944368132,0.280901613404497,3.87892925384297,0.491337269247072,3.30642499762449,0,0,0,0.718618141816238,0.168336113954066,0.250237039743928,1.10825646193673,0,0,0,1.47461838108027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0,0,0.269662616320329,0,0.38474715694639,0,0,0,0,0,0,0,0,1.59884970106048,3.25978839567199,0.219500570817251,0,0,0.370353780634118,2.28065813717227,0,0,0,0.821860859650752,0.144366447761074,0,0,0.790204397959275,0,0,0,0,1.87467667973554,0.16798212819886,0.850650583454319,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,1.00917975910825,0,2.3468251462704,0.258543431515556,0,5.071816515336,0,0,0.514414748524284,0,1.3321108950805,0.714889968290738,0.542621605391443,0,0.977208552881205,0,0,1.50719688529793,0,0.199945982364114,0,0,0,0.479249710983165,0,0,1.59259437334337,0.61642896765115,0.537182889719687,0,0,0,0,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0.613457458595699,1.50051156317903,3.25518028439683,0,0,0,0,0.300946099727719,0,2.0694614258501,0,0.184369168541703,0,0.195801157462741,0.343143423810856,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0.128139149255701,1.02341449813341,0.321707842287215,0,0.154209693802656,0,0.328508624055237,2.59627214591811,0.232420756919918,0,0,0.736647911487171,0.34444334449382,0.546273504020151,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,2.87132768998086,0.650060246036521,0,0.870036464629098,2.61882649094895,1.5350367472613,0.413509717453592,1.82614416276065,0.435050081742686,2.81247870473133,0.712256285173899,8.26424576804891,5.57351195358808,3.95599408733211,24.277867405332,0.464845549297286,0,1.3940745403212,2.15623506123262,1.06461206063404,0,0.37064843820784,0.286249773483982,5.95453390975468,1.2655176988749,0.38126038784765,0.767693373934002,4.2793898803392,0.95460974377781,1.56989728039846,0.359744915166629,1.09814811894422,0.824686816419805,1.2130948894399,0,0.842516912477962,0,2.19342140668156,0,0,0,1.13008116620243,0,0,0.438450885253763,1.15755106853338,5.24715801637306,1.42037263873893,0.30982349809975,0.281695602532241,0.717056761020258,0.392996164052485,2.49669736036875,0.709522128141196,0,0,1.13841952129715,2.44954304171488,0.384888450902048,0.670302275535787,0,0.470719003883896,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.43505344755765,2.15068535015921,1.78940886313933,3.67068111766199,0.19538809540204,0,0,0.540911356951966,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,8.57077028676375,0,0,0,0,0,0,0,0,0,14.6797363234,0,0,0,0,0,0,0,0.260427761085233,21.9524599990451,0,0.796554137998498,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0.544692317594951,0,0.153900517007594,2.05095700524602,0,0.0897576444097721,0,0,0,0.533034776018635,0,0,0,0.451191321234361,0.588187602953219,0.839107934879214,0.75901493089674,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0.300646838828985,0,4.6525771089503,3.64091151463049,6.90652420495896,5.97362148864794,0,4.02156551738102,0,1.27390116638691,0,0.17472666824203,0,2.22539561964896,1.97341156132701,2.21711734043665,0.581934098930517,0,0,4.65942543798953,4.17300684576278,0.0633107959558787,0,1.04206466326994,0,0,0,0,0.171594997861965,0,0.248505071130865,8.24929121158784,0.951329442515298,0.627617077873999,1.22397861163586,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,21.55561845173,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,3.04788476865836,0,0,0,0,3.25799761052228,1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| |||
|short_description=p9@B3GNT5 | |||
}} |
Revision as of 22:54, 21 January 2014
Short description: | p9@B3GNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_B3GNT5_5end |
Coexpression cluster: | NA |
Association with transcript: | 230bp_to_ENST00000462559, uc003fln.1_5end |
EntrezGene: | B3GNT5 |
HGNC: | 15684 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.14e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.14e-14 | 42 |
monopoietic cell | 1.08e-11 | 59 |
monocyte | 1.08e-11 | 59 |
monoblast | 1.08e-11 | 59 |
promonocyte | 1.08e-11 | 59 |
defensive cell | 2.67e-11 | 48 |
phagocyte | 2.67e-11 | 48 |
macrophage dendritic cell progenitor | 4.54e-11 | 61 |
myeloid lineage restricted progenitor cell | 1.09e-09 | 66 |
granulocyte monocyte progenitor cell | 1.94e-09 | 67 |
myeloid leukocyte | 2.66e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.48e-13 | 167 |
skeletal element | 1.41e-08 | 90 |
bone marrow | 3.31e-08 | 76 |
somite | 7.83e-08 | 71 |
presomitic mesoderm | 7.83e-08 | 71 |
presumptive segmental plate | 7.83e-08 | 71 |
dermomyotome | 7.83e-08 | 71 |
trunk paraxial mesoderm | 7.83e-08 | 71 |
paraxial mesoderm | 1.24e-07 | 72 |
presumptive paraxial mesoderm | 1.24e-07 | 72 |
skeletal system | 1.67e-07 | 100 |
dense mesenchyme tissue | 1.94e-07 | 73 |
mesoderm | 2.69e-07 | 315 |
mesoderm-derived structure | 2.69e-07 | 315 |
presumptive mesoderm | 2.69e-07 | 315 |
skeletal muscle tissue | 3.55e-07 | 62 |
striated muscle tissue | 3.55e-07 | 62 |
myotome | 3.55e-07 | 62 |
bone element | 4.19e-07 | 82 |
muscle tissue | 8.96e-07 | 64 |
musculature | 8.96e-07 | 64 |
musculature of body | 8.96e-07 | 64 |