FFCP PHASE1:Hg19::chr3:183005219..183005232,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84002 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15684 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-35bp_to_ENST00000462559,uc003fln.1_5end | |||
|description=CAGE_peak_19_at_B3GNT5_5end | |||
|id=chr3:183005219..183005232,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.64e-24!45;CL:0002057!3.83e-21!42;CL:0002194!1.78e-17!63;CL:0000576!1.78e-17!63;CL:0000040!1.78e-17!63;CL:0000559!1.78e-17!63;CL:0002009!1.35e-16!65;CL:0000839!1.23e-14!70;CL:0000557!2.80e-14!71;CL:0000766!1.72e-13!76;CL:0000763!1.42e-07!112;CL:0000049!1.42e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.28e-42;33!CL:0002057;2.28e-42;33!CL:0000473;3.51e-29;39!CL:0000234;3.51e-29;39!CL:0000576;1.54e-18;48!CL:0000766;6.43e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.79e-35,42;CL:0002057,1.79e-35,42;CL:0000473,1.42e-30,48;CL:0000234,1.42e-30,48;CL:0002194,9.35e-27,59;CL:0000576,9.35e-27,59;CL:0000040,9.35e-27,59;CL:0000559,9.35e-27,59;CL:0002009,9.14e-26,61;CL:0000839,1.51e-23,66;CL:0000557,3.82e-23,67;CL:0000766,2.73e-21,72;CL:0000763,5.70e-13,108;CL:0000049,5.70e-13,108;CL:0002087,5.90e-12,115;CL:0002031,2.65e-11,120;CL:0000738,1.54e-09,136;CL:0002032,1.72e-07,161;CL:0000837,1.72e-07,161;CL:0000037,4.98e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;6.97e-24;42!UBERON:0008425;2.43e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060072;1.06e-12;4!DOID:0060084;4.05e-08;3!DOID:127;4.05e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060072,8.65e-13,4;DOID:0060084,4.35e-08,3;DOID:127,4.35e-08,3;DOID:0060085,7.15e-07,1;DOID:3165,7.15e-07,1;DOID:0060121,7.15e-07,1;DOID:2438,7.15e-07,1;DOID:4418,7.15e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002405!1.14e-11!115;UBERON:0002371!1.68e-11!80;UBERON:0002193!4.79e-10!112;UBERON:0001474!5.30e-10!86;UBERON:0002390!1.38e-08!102;UBERON:0003061!1.38e-08!102;UBERON:0004765!3.92e-07!101;UBERON:0001434!3.92e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.57e-20,76;UBERON:0001474,2.98e-18,82;UBERON:0004765,2.64e-16,90;UBERON:0002405,1.17e-15,93;UBERON:0002390,1.13e-14,98;UBERON:0003061,1.13e-14,98;UBERON:0001434,2.64e-14,100;UBERON:0002193,5.70e-13,108;UBERON:0002204,4.30e-07,167 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,1.26343974685366,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0.369754010166788,0,0.142169232487422,0,0.553995408531877,0,0,0,0,0,0,0.377875943688809,0.242584061187816,0.697287110717054,0.822335776043652,1.23882548358041,0.863077176966451,1.5369642391746,3.31075121844019,1.72372840368309,3.22742341791913,2.70852973188684,0.188242339542605,2.18324920046277,0.449446968890169,4.28517449319264,6.09765151444578,5.11469700639233,0,0.797854630486527,0,1.45104619314292,3.40431134814684,2.4912889959823,2.00998932205395,0.521482918420201,3.04064382587163,0.605399502633369,7.73383035573886,4.43047342417238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0.24666754841716,0,0.134710672069688,0.326923806226917,0,0,0.234321431833797,0.312160076830321,0,0.597794722207204,0.23486899728753,0.323745888736263,0.140450806702248,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0.43596006883328,0.1466765716419,0.387815147273333,0,0.845302752556,0,0,0,0,0,0.285955987316295,0,0,0.65147236858747,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0.34444334449382,0.546273504020151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0.462145851343933,0,0.137836572484531,0.107420244868274,0,0.681813019328807,0,1.32227932288782,0.576570202095319,1.40373983744043,0.910420027699949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.404364963146632,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0.349934720244983,0.288666338176536,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0,1.61119057208048,0,0,0,0,0,0,0,0,5.07267999977935,0,0.341380344856499,0,0,0,0,0,0,0,0,0,0,0,1.0893846351899,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0.451191321234361,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55549813004637,0.207376382794494,0,0,0.313932918407225,0,0,4.71493888244671,0,0.195984794828755,0,0,0,0.967563312890852,3.65446585430928,0.656923656425674,0.0969890164884194,0,0,1.64450309576101,1.9871461170299,0,0,0.721429382263803,0,0,0,0,0.171594997861965,0.432164393964449,0,0.471388069233591,0,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,3.14967940847196,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15144807199414,0,0,0,0,1.08599920350743,1.72844298240254,0.653174720218818,1.19730191562487,0.082092520749339,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0.213574825135389,0,0,0,0,0,1.91502377331055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0.457680136793847,0,0,0.887130899937803,0.477890301491107,2.69881867298163,0.310525913752519,0,0,0,0.150257608997218,0,0,0.545545977607678,0.322231671127465,0,0.398095888698616,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0.236387681767936,0.222462803784138,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,3.03541695629618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0.435433495793923,0.342233301085281,0.26940821205835,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p19@B3GNT5 | |||
}} |
Revision as of 22:54, 21 January 2014
Short description: | p19@B3GNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_B3GNT5_5end |
Coexpression cluster: | NA |
Association with transcript: | -35bp_to_ENST00000462559, uc003fln.1_5end |
EntrezGene: | B3GNT5 |
HGNC: | 15684 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.79e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.79e-35 | 42 |
defensive cell | 1.42e-30 | 48 |
phagocyte | 1.42e-30 | 48 |
monopoietic cell | 9.35e-27 | 59 |
monocyte | 9.35e-27 | 59 |
monoblast | 9.35e-27 | 59 |
promonocyte | 9.35e-27 | 59 |
macrophage dendritic cell progenitor | 9.14e-26 | 61 |
myeloid lineage restricted progenitor cell | 1.51e-23 | 66 |
granulocyte monocyte progenitor cell | 3.82e-23 | 67 |
myeloid leukocyte | 2.73e-21 | 72 |
myeloid cell | 5.70e-13 | 108 |
common myeloid progenitor | 5.70e-13 | 108 |
nongranular leukocyte | 5.90e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 2.65e-11 | 120 |
leukocyte | 1.54e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.72e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-07 | 161 |
hematopoietic stem cell | 4.98e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.57e-20 | 76 |
bone element | 2.98e-18 | 82 |
skeletal element | 2.64e-16 | 90 |
immune system | 1.17e-15 | 93 |
hematopoietic system | 1.13e-14 | 98 |
blood island | 1.13e-14 | 98 |
skeletal system | 2.64e-14 | 100 |
hemolymphoid system | 5.70e-13 | 108 |
musculoskeletal system | 4.30e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
benign neoplasm | 8.65e-13 | 4 |
cell type benign neoplasm | 4.35e-08 | 3 |
leiomyoma | 4.35e-08 | 3 |
organ system benign neoplasm | 7.15e-07 | 1 |
skin benign neoplasm | 7.15e-07 | 1 |
integumentary system benign neoplasm | 7.15e-07 | 1 |
dermis tumor | 7.15e-07 | 1 |
cutaneous fibrous histiocytoma | 7.15e-07 | 1 |