FFCP PHASE1:Hg19::chr3:154797781..154797800,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4311 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7154 | |||
|TSSclassifier=strong | |||
|UniProt=Q3KQS6 | |||
|association_with_transcript=-9bp_to_ENST00000382989_5end | |||
|coexpression_cluster_id=C2728 | |||
|description=CAGE_peak_6_at_MME_5end | |||
|id=chr3:154797781..154797800,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.03e-32!180;CL:0000057!1.33e-17!75;CL:0000680!3.00e-13!57;CL:0000056!3.00e-13!57;CL:0000355!3.00e-13!57;CL:0002620!1.74e-12!23;CL:0000187!7.80e-12!54;CL:0000393!5.61e-10!60;CL:0000211!5.61e-10!60;CL:0000183!2.94e-09!59;CL:0000136!2.95e-08!15;CL:0000192!4.45e-08!42;CL:0000514!4.45e-08!42;CL:0000325!6.18e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.26e-16;23!CL:0000187;2.57e-08;55!CL:0000136;2.86e-08;13!CL:0000057;3.90e-08;73!CL:0000723;4.62e-08;61!CL:0000134;1.22e-07;55!CL:0000192;6.51e-07;43!CL:0000048;8.02e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.81e-21,76;CL:0002620,7.77e-16,23;CL:0000680,2.05e-15,58;CL:0000056,2.05e-15,58;CL:0000355,2.05e-15,58;CL:0000187,1.18e-13,55;CL:0000048,7.04e-13,427;CL:0000723,2.57e-12,433;CL:0000034,3.17e-11,441;CL:0000393,5.91e-11,61;CL:0000211,5.91e-11,61;CL:0000192,1.51e-09,43;CL:0000514,1.51e-09,43;CL:0000136,3.37e-09,15 | |||
|ontology_enrichment_development_v019=CL:0000355;9.96e-09;58!CL:0000514;6.51e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.00e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.18e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.64e-19!83;UBERON:0002329!7.64e-19!83;UBERON:0003077!7.64e-19!83;UBERON:0003059!7.64e-19!83;UBERON:0007282!7.64e-19!83;UBERON:0009618!7.64e-19!83;UBERON:0007285!7.64e-19!83;UBERON:0004290!1.17e-16!70;UBERON:0000486!4.13e-14!82;UBERON:0005256!7.60e-14!143;UBERON:0001134!2.67e-13!61;UBERON:0002036!2.67e-13!61;UBERON:0003082!2.67e-13!61;UBERON:0000475!2.86e-13!365;UBERON:0002385!3.53e-13!63;UBERON:0001015!3.53e-13!63;UBERON:0000383!3.53e-13!63;UBERON:0003102!1.25e-12!95;UBERON:0002100!1.59e-11!216;UBERON:0002199!1.36e-08!45;UBERON:0002416!1.36e-08!45;UBERON:0000481!1.14e-07!347;UBERON:0003104!3.10e-07!238;UBERON:0009142!3.10e-07!238;UBERON:0002097!4.51e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;6.01e-10;31!UBERON:0001015;6.01e-10;31!UBERON:0000383;6.01e-10;31!UBERON:0002097;9.18e-08;41!UBERON:0002199;1.58e-07;46!UBERON:0002416;1.58e-07;46!UBERON:0003102;3.59e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.53e-19,73;UBERON:0002329,1.67e-19,71;UBERON:0003059,1.67e-19,71;UBERON:0007282,1.67e-19,71;UBERON:0004290,1.67e-19,71;UBERON:0009618,1.67e-19,71;UBERON:0003077,5.93e-19,72;UBERON:0007285,5.93e-19,72;UBERON:0007503,5.36e-16,78;UBERON:0002385,3.57e-15,64;UBERON:0001015,3.57e-15,64;UBERON:0000383,3.57e-15,64;UBERON:0001134,4.12e-15,62;UBERON:0002036,4.12e-15,62;UBERON:0003082,4.12e-15,62;UBERON:0000486,8.78e-15,83;UBERON:0005256,1.88e-12,122;UBERON:0003102,3.82e-12,99;UBERON:0002199,4.01e-12,46;UBERON:0002416,4.01e-12,46;UBERON:0003104,6.85e-11,160;UBERON:0009142,6.85e-11,160;UBERON:0002097,1.38e-10,41;UBERON:0002100,2.61e-09,199;UBERON:0000490,2.90e-07,148 | |||
|phase1_expression=8.17552706717505,17.7703434829516,2.81908808191942,12.0087958023756,3.12872766099101,0.872338524100369,17.7309914717817,12.6343974685366,9.14149698699435,0.491467873003018,0,1.09220686065086,0.527533956456907,1.11389717664042,1.65698687863958,2.6893005858071,1.20538905604795,2.92124036154949,1.46379839637152,0.246242116153576,0,0,0.286235987131057,0.136874425072884,1.00434111675842,0,0,0,0,0,0.154816123316076,0,0,0,1.16200800870452,0.568676929949686,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,3.58015173161885,0,0.50133791063589,0.579386075843295,2.3858578411533,0.486634870302636,0.945348171640679,0.443458794925128,0.087834785693126,1.5062593682237,0,0,0,0.174129737299267,0.26591592103773,0,0,0.371457501329565,0,0.860234595106124,0,0,0.419499436209906,0,0.417989933073621,0.775250277507987,1.06729878806013,0,0,0.760272105718513,0,0.367663080345869,0,0.535798369704479,0.44905874525234,0.563057402416611,0,0,0.183201743930407,3.9534125230819,15.511210565933,0,0,0.886413581652058,15.4918741551466,10.8997915884549,2.83734705758686,0,0,0,5.91300967259556,3.63718814588158,3.92308567472301,0,0,3.51482147750695,25.9092863769166,5.70471821544449,23.7623402077364,17.1454368019897,14.7304379375,14.6068838970338,11.432633590274,9.82674538494144,10.5392296799281,33.2640800038975,19.534087413006,0.910161361938026,0.718618141816238,12.1202002046928,13.3876816263002,21.0568727767979,10.9744405220209,2.75839016219118,18.3290431866048,1.58805056424029,6.63741652048789,23.4913127700424,26.9153514472644,3.00091096084402,14.7365116810968,21.1265242837416,13.5865305122061,9.28269827326964,20.3643340786905,6.05841058185875,18.3179298298176,5.4959659318396,7.4552014428489,5.54136540252021,1.86516651541536,0.386521706326594,0.272746120590835,0,0,0,0.348581828608555,0.207322110030741,0,0,6.25798129319264,3.85944562915731,0,48.2942645153258,56.3065995702277,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,0,1.26755034821831,0,0,1.7658523976586,0.245976877086227,5.66173773985134,0,0,0,1.01847289674383,4.88712457965487,3.11980435583874,0,0,0.352226082707465,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0.53735113621709,0,0,0,0,0,0,0,19.9383388077411,20.627374980147,1.17217447210047,10.2643467613623,7.30075198193597,27.0308752059526,3.71574362419752,0.560655421726804,0,0.2933531432838,8.01484637698222,3.57656445851882,3.381211010224,12.4990914794889,6.24044621468197,0.514414748524284,0,0.532844358032199,7.14889968290738,64.5719710415817,13.1718453884923,5.86325131728723,9.24019066730619,7.91951872933429,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,6.51515880004106,7.60262393436419,23.0988642579465,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,6.74106321552464,8.97484377612075,2.90090859405225,0.736148950314839,0.500170521059677,2.17012018959788,0.207970861530807,2.3195768543631,2.52323864054295,1.63997980989798,11.736897889381,4.5481500811197,11.3820378421755,0.664225598535437,0.737476674166813,45.9614320536158,0,0,0,0,0,1.5156378572313,0,2.72151263996712,9.17998888929474,8.44040853084343,19.6462066103152,2.05022638809122,14.3278029738677,0.160853921143607,0,1.54209693802656,0.532685175939381,3.20295908453856,0,0.929683027679674,0.120859449591622,0.40101294060657,1.10497186723076,5.28146461557191,5.28064387219479,10.0965799518757,0.451199612907412,1.77135275340154,0.784349769176855,0,0.527758144464379,0,0,0.215915916102139,0,0,0,0.509752546090077,0,0.223874754722178,0,0,2.56450125116389,1.96808787419823,1.95227036798582,1.13345112812495,2.47237555009527,2.7228134973794,0,0,1.6068392984416,2.99679226705578,2.92692372517824,3.53058451870098,10.6134160813089,23.0953526466788,13.9216026157659,3.49429172406014,0.979352392114111,0.165284915360978,0.192190067365106,0.510450849978337,0,17.1992853239996,29.9071729489108,2.7881490806424,2.46426864140871,0.532306030317022,3.47973196830029,0.9266210955196,0.143124886741991,3.34942532423701,4.42931194606216,16.2035664835251,3.07077349573601,32.095424102544,0.318203247925937,1.56989728039846,10.9722199125822,12.6287033678585,7.65780615246962,1.2130948894399,0,1.26377536871694,1.46290121726877,8.52997213709495,3.16950440270266,8.46299450729512,14.8475703551398,0,0,0,0,2.89387767133344,9.83842128069949,0.405820753925408,3.40805847909725,1.40847801266121,38.7210650950939,62.6828881663713,0,6.74046021734136,0.633322905892992,0.658589785919804,1.13841952129715,4.54915136318478,0,0.670302275535787,0,1.97701981631236,0,0,0,0.229723400206959,1.52234282769651,2.29391162142713,2.84823593587081,0.952927101831156,0.822724546172388,0.648473311192717,0.540031437238115,0,4.27296284509893,0,0,0,8.80042199156314,0.640276590135727,0,0,0,0,0,0,0,0,0,1.69291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10222901961303,3.6408156524854,0,0,3.10367830158997,0,9.21482106297696,0.994147647766298,0,13.8022794228403,0,0,0,0,0,0,0,0.311039587661807,0.269605053441981,0,0,0.295930216910801,0,2.22273980289274,0,0,0,0,0,3.62499787717397,0,0,1.18193840883968,0,0,0,6.20018970069687,1.08536794762867,0,0.110579259931225,0,0.438770794307945,0,0,0.538651809526579,3.98797195464504,0,0,0,3.19001159731919,2.10674464824283,0.533034776018635,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,8.1380959343072,0.611030144933625,0,0,0,0,0.802577647298789,0.234264445725339,1.64209310294099,0.391329237864179,0,6.70793484843964,1.20990716048664,0,3.22251556105289,0.300646838828985,0.103688191397247,0,0,0,1.19472429772959,0,0.554698692052555,0,0,0,1.57254001417827,0,0,0,0,0.193978032976839,0,0.451961481561065,5.34463506122329,3.37814839895082,0.126621591911757,0,0.400794101257669,1.70762395791482,0.799238438328521,0,0,0,0,1.11827282008889,1.41416420770077,5.16435983079733,3.97490815986866,0.815985741090574,1.44475294950759,1.20084057741958,0.273810757783986,0,1.28929632425987,0,0.279282401272254,1.14580212005842,0.717873024576814,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0.321506296930038,0.412618309791701,0,0,0,0,0,4.01909107225911,3.46200281690987,0,0,5.37362552494447,0.714695326373367,0,0,1.62899880526114,0,1.30634944043764,3.59190574687462,0.082092520749339,0.851940108927109,0.113312091520126,0.732761168390412,0,0,0,0,0,7.04796922946785,0.471612915298998,4.97086866416635,0,0,0.365377795142688,0,6.52821364043369,8.7741462907945,11.3347863402481,12.4591599669726,1.72759505875258,0,0.122026264901963,0,0.573409195690071,0.776503360757966,0.124192805882767,0,0.37494122388632,0.151649117541648,6.56570267153425,0,0,0,1.34329322598187,10.7508122529723,5.54805861502613,17.8038824958584,7.0439012490721,0.889811221596536,3.20376095755693,4.83938956042365,0.777186002913902,3.10495814978231,2.86734180894664,30.5866116271251,5.43420349066908,5.39118070193112,11.1653520114358,12.0001364216699,3.15540978894159,2.66563648518157,3.25496586563729,10.9109195521536,2.36303225493475,13.9210127963548,10.350493106164,0,4.46414416737631,5.05124233148879,0,0,0.214441591374926,0.260994291965212,0.226705925512272,0.926089897295336,2.93684045407761,0,0,0.219284049578707,2.65033718918822,3.47245268887647,0,0,0,6.98877899207979,0,0,0,0,1.96565909307848,1.47463745252232,0,0,0,0,0,17.1218533734212,0,2.48830904013189,0,0,0,0,0,0,0,0,0,0.630893960010027,0,8.8168985922671,2.1437183414724,1.34881372702565,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0.381382095467167,0,0.795664888465099,0.0752103283492573,1.21023041222112,0,0,0.655087670040387,0,0.135075169236789,0.781078098613847,0,0,0,0.548257766857182,3.47347824872506,0,0.127762427639595,0,0.336283722218824,0,0,1.5966426629275,0,18.3492170098038,2.85472878502693,0.0657727735628491,0,0.222462803784138,2.8257513426185,1.72827148907602,1.68163297988273,0,0.647782773655864,0,1.00067161847319,0,0,1.73858272302579,4.81026818838152,1.03608082081518,0.51215543128185,0.691259661814092,0,20.7081001278489,20.7920707612345,4.23387050190929,0.22910686854405,0.62041277132864,0,0,0,0.975343399858155,3.88457302312737,2.66923297826242,0,0,0.467878926924211,4.17796627838873,0.118920090777569,1.24240690242856,0,2.56636834063345,9.02937649862952,1.96703604453562,0,0,0,0.588925401344836,0.594092800654172,0.4226557275834,1.0195626881269,0,0,0,0,6.70500256259814,0,1.46067277649303,0.458729283404541,1.86341458096887,0,0,0,4.2322147241232,20.0877309810046,4.15958065768276,12.9787968637137,0,0.109265571963696,1.0135880080915,0,0,0,0,0.303114792872958,0,0,0.310298987585686,0.639701945702943,0.476128862927481,0.258355639344024,0.186224142887574,2.24263725161227,0.445530107947154,0.404234377916439,0.653150243690884,0.684466602170562,0.134704106029175,1.00411087549747,3.32660356546013,0.976839223331694,6.83055013617379,54.0602390403432,0,16.4248659682418,0.611207220914332,2.44137706989443,0.665756774185513,0.805095174364105,0 | |||
|short_description=p6@MME | |||
}} |
Revision as of 22:09, 21 January 2014
Short description: | p6@MME |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MME_5end |
Coexpression cluster: | C2728_Smooth_Neutrophils_Pancreatic_tridermal_Fibroblast_mesenchymal_Mesenchymal |
Association with transcript: | -9bp_to_ENST00000382989_5end |
EntrezGene: | MME |
HGNC: | 7154 |
UniProt: | Q3KQS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.81e-21 | 76 |
skin fibroblast | 7.77e-16 | 23 |
muscle precursor cell | 2.05e-15 | 58 |
myoblast | 2.05e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.05e-15 | 58 |
muscle cell | 1.18e-13 | 55 |
multi fate stem cell | 7.04e-13 | 427 |
somatic stem cell | 2.57e-12 | 433 |
stem cell | 3.17e-11 | 441 |
electrically responsive cell | 5.91e-11 | 61 |
electrically active cell | 5.91e-11 | 61 |
smooth muscle cell | 1.51e-09 | 43 |
smooth muscle myoblast | 1.51e-09 | 43 |
fat cell | 3.37e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.53e-19 | 73 |
somite | 1.67e-19 | 71 |
presomitic mesoderm | 1.67e-19 | 71 |
presumptive segmental plate | 1.67e-19 | 71 |
dermomyotome | 1.67e-19 | 71 |
trunk paraxial mesoderm | 1.67e-19 | 71 |
paraxial mesoderm | 5.93e-19 | 72 |
presumptive paraxial mesoderm | 5.93e-19 | 72 |
epithelial vesicle | 5.36e-16 | 78 |
muscle tissue | 3.57e-15 | 64 |
musculature | 3.57e-15 | 64 |
musculature of body | 3.57e-15 | 64 |
skeletal muscle tissue | 4.12e-15 | 62 |
striated muscle tissue | 4.12e-15 | 62 |
myotome | 4.12e-15 | 62 |
multilaminar epithelium | 8.78e-15 | 83 |
trunk mesenchyme | 1.88e-12 | 122 |
surface structure | 3.82e-12 | 99 |
integument | 4.01e-12 | 46 |
integumental system | 4.01e-12 | 46 |
mesenchyme | 6.85e-11 | 160 |
entire embryonic mesenchyme | 6.85e-11 | 160 |
skin of body | 1.38e-10 | 41 |
trunk | 2.61e-09 | 199 |
unilaminar epithelium | 2.90e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.18e-07 | 14 |