FFCP PHASE1:Hg19::chr3:128516853..128516867,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7879 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9788 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z680 | |||
|association_with_transcript=68bp_to_BX537775_5end | |||
|description=CAGE_peak_10_at_RAB7A_5end | |||
|id=chr3:128516853..128516867,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.87e-08!63;CL:0000576!1.87e-08!63;CL:0000040!1.87e-08!63;CL:0000559!1.87e-08!63;CL:0002009!3.71e-08!65;CL:0002057!5.38e-08!42;CL:0000839!1.16e-07!70;CL:0000766!1.38e-07!76;CL:0000860!1.79e-07!45;CL:0000557!3.09e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.20e-14;39!CL:0000234;1.20e-14;39!CL:0000860;7.47e-14;33!CL:0002057;7.47e-14;33!CL:0000576;1.68e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.77e-16,48;CL:0000234,7.77e-16,48;CL:0002194,2.23e-15,59;CL:0000576,2.23e-15,59;CL:0000040,2.23e-15,59;CL:0000559,2.23e-15,59;CL:0002009,1.18e-14,61;CL:0000766,4.78e-14,72;CL:0000860,2.62e-13,42;CL:0002057,2.62e-13,42;CL:0000839,4.80e-13,66;CL:0000557,9.42e-13,67;CL:0000763,1.39e-08,108;CL:0000049,1.39e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.70e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.24e-08;3!DOID:127;4.24e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.82e-08,3;DOID:127,2.82e-08,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.76e-10,76;UBERON:0001474,2.94e-09,82;UBERON:0004765,1.19e-08,90;UBERON:0002390,1.84e-08,98;UBERON:0003061,1.84e-08,98;UBERON:0002405,3.35e-08,93;UBERON:0001434,6.34e-08,100;UBERON:0002193,9.16e-08,108 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.140954404095971,0,0.893922188854576,0.872338524100369,0,0,1.04474251279935,0.491467873003018,0.697801167972428,0,0.263766978228454,0.37129905888014,0.331397375727916,1.34465029290355,0.602694528023977,2.19093027116212,0.487932798790507,0.123121058076788,0.612002073732759,0,0.286235987131057,0.684372125364421,0.125542639594803,0.458480434487708,0.903106483949403,0.550975469195755,0,0.383829398097213,0.309632246632152,0,0.30120591877825,0.369754010166788,0,0.142169232487422,0.293600439334847,0,0.401088894940283,0.434021741431704,0.223915474239924,0.971680998056939,1.03030227053675,0.872389432677388,0.755751887377619,1.4555043671269,1.39457422143411,0.411167888021826,0.619412741790207,2.01384674625505,1.7931249457037,0.47296445977717,1.03423704220986,1.29096936716765,0,1.31769637679823,0.545812300115692,0.674170453335254,1.83650335422542,0.641858054152187,0,1.31940520074686,0.997318288108159,1.70489900213078,2.03146467040009,1.70215567407342,2.4912889959823,1.50749199154046,1.5644487552606,0.434377689410233,1.21079900526674,1.10483290796269,1.26584954976354,0.633765858935825,1.06302149982522,0.209658645508376,0.112328631146495,0.300353785683013,0.48217676009124,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,1.17447437874188,0,0,0,0,0,0.393010762749165,0.616804496998528,0.167186495390678,0,0,1.94826728407911,0.222820913770347,0.589211814949674,0.443067789167242,0,0.25618263945135,0.130059347559878,0.328875809207352,0.276350017785848,0,0,0,1.04535523804977,0.339928028092699,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0.236777252044017,0,0.403213486449465,0.267440195783507,0.289648807765598,2.43806866313962,0.670700859703636,0.12786256184353,0.722878304769133,0,0.869079113764942,0.795285947051099,0.973269740605272,0.0945348171640679,0.665188192387692,0.175669571386252,0.196468613246569,0.364295288292542,0,0.649094787309367,2.26368658489047,1.06366368415092,0.238490624305342,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,1.06729878806013,0,0,0.760272105718513,0,0.735326160691737,0,0.357198913136319,0.673588117878509,0.450445921933289,0,0,0.366403487860815,0,0,0,1.49091585508596,0.12663051166458,0.264818361626438,0.860509862246441,0,0.560677600142307,0,1.2333377420858,0.311211035399766,0.67355336034844,0.817309515567294,0.756787138224657,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.469737994575059,0.485618833104395,0.561803226808994,0,1.22834317311768,0.723280468230358,0,1.23633464639278,0,0,0,0.250237039743928,0,0.438977620880838,0,0.600952235626387,0.113432183160021,0.179389635688862,0.427114777637135,0,0.300091096084402,0.206105058476878,0.515281080091258,0,0,0.194874010322397,0.504867548488229,0.276149695926898,0.484938170456436,0,0.10075209822764,0.339121184620975,0.57978255948989,0.818238361772504,0,0.609868530647977,0,0.464775771478074,0.414644220061482,0.756962552626885,0.72995471815166,0,1.92972281457866,1.38134921352481,0.464367928031979,0.721879481669586,0.591534000199219,0.505754070234305,0.723033089650446,0.220587945464788,0.217879444092406,0,0.808987848960987,1.37355025587742,0.38474715694639,0.738155454624648,1.40241773803446,0.4115740113314,1.47008711385542,0,1.96565443335525,0,0,0.245976877086227,0.343135620597051,0.109750285408626,0,0.603173834469785,0.555530670951178,0.325808305310325,0,0,0.231860809950154,0.234817388471643,0.866198686566443,0.925971025153221,0.951270761172991,1.58040879591855,0,0,0.234004265139238,0.148631162288728,0,0.503946384596579,0.283550194484773,0.0895585227028483,0.871901815541886,0.383382679165211,0.492663237895943,0.088048434013226,0.414656231081544,0.720599767084807,0,0.444485260045183,0.763976851116555,0,0,1.13110241973656,1.20137223137567,1.14330573052231,0.112131084345361,0.87192013766656,0.5867062865676,0.129271715757778,0,0.845302752556,0.797814349754612,0,0,0,0,1.00084595560703,0,0,0,0.710783897485092,0,0.301439377059586,0.871533458600294,0.399891964728228,2.43247561282381,1.50677127429638,4.21667878966063,0.239624855491583,1.14861935834114,1.42636905040718,0.289562613335158,1.02738161275192,0,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,2.24702107184155,2.99161459204025,0.828831026872071,0.49076596687656,1.00034104211935,0.542530047399471,0.623912584592421,1.42743191037729,0.946214490203608,0.819989904948992,0.300946099727719,0,1.03473071292505,0,0,0.347534457872331,1.17480694477644,0.343143423810856,0.413536052245775,0.862856803274467,0.426910231213777,0.606255142892519,0,0.604780586659361,0.248107807818777,0.153461973288062,1.12264037773229,0.512556597022804,0,0.160853921143607,0,0.771048469013278,0.177561725313127,0.164254312027618,0.519254429183621,0.464841513839837,0.362578348774867,0.601519410909855,0.460404944679482,0.34444334449382,1.27463817604702,1.18011973463482,0,0.15403067420883,0,0,0.527758144464379,0,0.850468526382578,0.647747748306418,0,0,0.501689773854853,0,0,0.447749509444357,0.657779629937804,0,0.256450125116389,0.328014645699706,0,0.412164046590889,0.640986253728404,0.165018999841176,0,0.650060246036521,0,0.386682873168488,0.154048617114644,0.460511024178389,0.964856007391714,0.107420244868274,0.725083469571143,0.426133137080504,0.267096106940212,0.165284915360978,1.34533047155574,0.127612712494584,1.0115778085555,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0,0,0.429374660225974,0.372158369359667,0.632758849437452,0.571890581771475,0.767693373934002,0.855877976067841,0,0.78494864019923,0.359744915166629,0.54907405947211,0.824686816419805,0.202182481573316,0,0.421258456238981,0,0.974853958525138,0,0,0.282810863907425,0,0.551365343546124,0.66343897524122,0,0.578775534266688,0,0,0.30982349809975,0.845086807596724,0.143411352204052,0.196498082026242,0.7133421029625,0.354761064070598,1.26664581178598,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,1.08890984861323,0,0.86101074534246,0,0,0,2.02979043692868,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0,2.37937552888281,0.320472213382419,0.962479855263359,0.245040215981032,0.557409525377156,0,0.0711418433484141,0,0.399158742865633,0,0.423347165447766,0.324621940274555,0.561594356226918,0.228234679033192,0.47003968731907,0,0.169291777801603,0.321176150207399,0.201799707191048,1.27753871307098,0.343505344755765,0.921722292925374,0,0.166849141711909,0.390776190804081,0.278406173895242,1.23087398947712,0,0.33307196799782,0,0,0.586032717087576,0,0.111443384277478,0,0.47748896947538,0.296964680832639,0.614321404198464,1.9882952955326,0.562677665642051,0,0,0.211125408127993,0.597743964753209,0.276283915531148,0.251932747854276,0,0.123084805461069,1.55519793830904,0.269605053441981,0.179021174675609,0.511572370226872,0.690503839458535,0,0,0,0.74214478529481,0,1.04171104434093,0,0,0.455173793141999,0,0.709163045303809,0,0,0.694499979733169,0.885741385813839,0.723578631752448,1.52581736317083,0.221158519862449,0.295547618953547,0.438770794307945,0,0.41827123283581,0.307801034015188,0.341826167541004,0.922255617552241,0.0897576444097721,0.217294743844016,0.31900115973192,0.183195186803725,0,0,0.31396051279005,0.831058409500782,0.451191321234361,0.19606253431774,0.167821586975843,0.37950746544837,0.158936578980379,0.421996129056054,0.326465616318295,0.141353071433941,0.216388639742091,0,0.176915129006678,0,0,0.123563938946503,0.104421949505455,0.606610196826093,1.60515529459758,0,0,0.19566461893209,0.485560759068186,0.789168805698781,0,0.30607276163049,0.379119477770928,0.150323419414493,0.103688191397247,1.99396161812156,0.330991955875499,0.313932918407225,0,0,0.138674673013139,1.21491816834592,0.489961987071888,0.261177619741208,0.17472666824203,0.51595809741485,0.580537987734511,0.0730893170861856,0.246346371159628,0.872901148395775,0.529536760149002,0.677942222341597,0.822251547880505,0.19871461170299,0.189932387867636,0.391102765469606,0.400794101257669,0,0.999048047910651,1.00863292007874,0.229073192331831,0.343189995723929,0,0.372757606696298,2.12124631155116,0.67952103036807,0.104602846312333,0,0.288950589901519,0.600420288709789,1.23214841002794,0,0.429765441419957,0.262887354279314,0.558564802544508,1.3749625440701,0.717873024576814,0.998395002494955,0.429226048136571,0.223171457441873,0.201550417460179,0.360299883542404,2.32991899054908,0.709048640765013,0.494495150286999,0.471824806979294,0.0984274815147488,0.338693328263138,0.795229689809303,1.22583065500418,0,0.275078873194468,1.66176135211674,0.674921674654501,0,0.425246896606173,0,0.709251365692784,0.419636705079985,0.105600336519406,0.35857467866569,0,0,0.662091970365432,0.25426853765475,2.71499800876856,2.5926644736038,2.93928624098468,0,0.082092520749339,0,0.226624183040251,0.879313402068495,0,0.646414781807753,0.92562821219883,0,0,0.213574825135389,0.471612915298998,0.828478110694391,0,0.197611631897944,0.243585196761792,0,0,0.2506898940227,0.612691153526923,0.983617892129413,0,0,2.44052529803926,1.6274820991845,0.573409195690071,0.887432412294818,0.434674820589684,0,0.124980407962107,0.758245587708239,0,0.941063278792687,0.468334905806882,0.28984205722165,0.447764408660622,0.701139929541673,0,0.757612021100357,0.50313580350515,0.889811221596536,0.457680136793847,1.05861646634267,0.310874401165561,0.295710299979268,0.318593534327405,0.449803112163605,0.310525913752519,0.829412415681711,0,0,0.150257608997218,0.380805212168795,0.406870733204662,0.363697318405119,0.429642228169954,0,0,1.60011105865261,1.03018711554838,0.673498977531838,0,0.770479321629213,0.857766365499703,0.260994291965212,0.453411851024545,0.231522474323834,0.489473409012935,0.179088841081487,0,0,0.353378291891762,0.192914038270915,0.844712203265363,0.512483037175893,0,0.911579868532147,0.691292180758654,0.584580926518165,0.132864840313363,0.163565394255844,0.655219697692825,0.737318726261158,0.422624246717254,0.39997479170986,0.213383459388282,0.172214979660816,0.567515953566836,0.184105950251841,0.139879507719444,0,0.639471856518258,0,0.314531883711793,0,0.678930119816101,0.425149840203366,0,0.558644917973244,0,0,0,0,0.3062454773532,0.385375350578757,0,0.798169295285756,0.205116364240755,0,0.553258019713743,0.484426936895553,0,0.0981477185010256,0.235939446695481,1.10057159113007,0.577628330751691,0.762764190934334,0,0.198916222116275,0.451261970095544,0.60511520611056,0.781514011233092,0.261906694481422,1.31017534008077,0,0.270150338473579,0.781078098613847,1.2401207790071,0.253663240775627,0,0,0,0.351742488719241,0.638812138197976,0.535701835878287,0.336283722218824,0.606965604236632,0.227662191351298,0,0,0.514464028312255,0.135939465953663,0.197318320688547,0.118193840883968,0.111231401892069,0.156986185701028,1.09980912941201,0,0,0,0.47775168788705,0.214429632529969,0.158013611732727,0.116241425368125,0.347716544605159,0,0.414432328326074,0.6828739083758,2.07377898544228,0,0.591660003652827,0.255640214277473,0.846774100381858,0.9164274741762,0.62041277132864,0,0.335566295393377,0.294450700845729,0.365753774946808,0.647428837187895,0.513314034281235,0,0.485710993059139,0.233939463462106,0.198950775161368,0.356760272332706,0.11294608203896,0.219881033490858,0.301925687133347,0.231522474323834,0,0.470317296361523,0.735444965261716,0,0.785233868459781,0.297046400327086,0.8453114551668,0.339854229375634,0.0939839179798536,0,0.499705779624645,0.892769693028288,0.705789743431384,0.320965466756673,0,1.37618785021362,0.286679166302903,0.157771562193185,0.407948941145488,0.872701380680755,1.0580536810308,0.743990036333503,0.462175628631418,0,0.126166424835079,0.327796715891087,0.506794004045748,0.61193297845189,0.534434810531121,0.827054095813604,1.75495277504663,0.0757786982182394,0.267964130156178,1.65833887891756,0.413731983447581,0,0.23806443146374,0.129177819672012,0.248298857183432,0.224263725161227,0.318235791390825,0.404234377916439,0.435433495793923,0,0.202056159043763,0.286888821570705,0.332660356546013,0.162806537221949,0.426909383510862,0,0.359300808426348,0,0.366724332548599,1.22068853494722,0,0.201273793591026,0 | |||
|short_description=p10@RAB7A | |||
}} |
Revision as of 21:14, 21 January 2014
Short description: | p10@RAB7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RAB7A_5end |
Coexpression cluster: | NA |
Association with transcript: | 68bp_to_BX537775_5end |
EntrezGene: | RAB7A |
HGNC: | 9788 |
UniProt: | Q7Z680 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.77e-16 | 48 |
phagocyte | 7.77e-16 | 48 |
monopoietic cell | 2.23e-15 | 59 |
monocyte | 2.23e-15 | 59 |
monoblast | 2.23e-15 | 59 |
promonocyte | 2.23e-15 | 59 |
macrophage dendritic cell progenitor | 1.18e-14 | 61 |
myeloid leukocyte | 4.78e-14 | 72 |
classical monocyte | 2.62e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.62e-13 | 42 |
myeloid lineage restricted progenitor cell | 4.80e-13 | 66 |
granulocyte monocyte progenitor cell | 9.42e-13 | 67 |
myeloid cell | 1.39e-08 | 108 |
common myeloid progenitor | 1.39e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.76e-10 | 76 |
bone element | 2.94e-09 | 82 |
skeletal element | 1.19e-08 | 90 |
hematopoietic system | 1.84e-08 | 98 |
blood island | 1.84e-08 | 98 |
immune system | 3.35e-08 | 93 |
skeletal system | 6.34e-08 | 100 |
hemolymphoid system | 9.16e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.82e-08 | 3 |
leiomyoma | 2.82e-08 | 3 |