FFCP PHASE1:Hg19::chr3:122920847..122920858,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26984 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20260 | |||
|TSSclassifier=strong | |||
|UniProt=C9JZ27 | |||
|association_with_transcript=0bp_to_ENST00000466519_5end | |||
|coexpression_cluster_id=C22 | |||
|description=CAGE_peak_2_at_SEC22A_5end | |||
|id=chr3:122920847..122920858,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.25e-18!53;CL:0000051!4.25e-18!53;CL:0000838!6.30e-18!52;CL:0000738!1.73e-12!140;CL:0000945!1.35e-09!24;CL:0000826!1.35e-09!24;CL:0000791!2.29e-09!18;CL:0000789!2.29e-09!18;CL:0002420!2.29e-09!18;CL:0002419!2.29e-09!18;CL:0000790!2.29e-09!18;CL:0002087!3.34e-09!119;CL:0002031!8.07e-09!124;CL:0000236!7.37e-08!14;CL:0000084!8.13e-08!25;CL:0000827!8.13e-08!25;CL:0002076!2.84e-07!43;CL:0000037!4.96e-07!172;CL:0000566!4.96e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000791;3.80e-20;18!CL:0000789;3.80e-20;18!CL:0002419;3.80e-20;18!CL:0000542;2.30e-17;53!CL:0000236;1.01e-14;13!CL:0000084;2.97e-13;25!CL:0000624;2.57e-12;6!CL:0000625;1.72e-11;11!CL:0000945;6.50e-11;24!CL:0000094;4.71e-10;8!CL:0000623;4.85e-07;3!CL:0000081;5.76e-07;11!CL:0000898;6.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.06e-27,52;CL:0000542,5.55e-27,53;CL:0000051,5.55e-27,53;CL:0000738,3.60e-22,136;CL:0000791,1.48e-20,18;CL:0000789,1.48e-20,18;CL:0002420,1.48e-20,18;CL:0002419,1.48e-20,18;CL:0000790,1.48e-20,18;CL:0000037,9.18e-17,168;CL:0000988,3.89e-15,177;CL:0002087,8.94e-15,115;CL:0000236,7.85e-14,14;CL:0002031,1.10e-13,120;CL:0000084,1.56e-13,25;CL:0000827,1.56e-13,25;CL:0002032,4.69e-13,161;CL:0000837,4.69e-13,161;CL:0000624,2.73e-12,6;CL:0000625,6.78e-12,11;CL:0000945,3.76e-11,24;CL:0000826,3.76e-11,24;CL:0000094,3.71e-10,8;CL:0000623,4.56e-07,3;CL:0000825,4.56e-07,3;CL:0000081,4.88e-07,11;CL:0000898,6.42e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;3.80e-20;18!CL:0000051;2.30e-17;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0.893922188854576,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0.247532705920093,0.994192127183747,0,0,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0.286235987131057,0.136874425072884,0.125542639594803,0.534893840235659,0.246301768349837,0.629686250509434,2.75354993794233,1.15148819429164,2.94150634300544,1.83884244895785,1.204823675113,0.369754010166788,1.31694240986513,1.13735385989937,1.17440175733939,6.09394949385065,3.81034450193269,4.77423915574874,0,0.32389366601898,0.515151135268373,0,0,0.485168122375632,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0.47296445977717,0,0,0,0.376484679085209,0.272906150057846,0,0,0,0.639337125799041,0,0.398927315243264,0,0,1.70215567407342,1.24564449799115,0,0,0,0,0.368277635987565,0.316462387440884,0.422510572623884,0.850417199860174,0,0.786300418025466,0.901061357049038,0.48217676009124,0.570025487482497,0.39783335439818,0.182664153764634,1.75996244461323,3.82297027883492,2.66852776159066,2.98711155796555,2.00197993518006,1.72425731986345,1.32208974556972,2.86216126360609,6.83055562931338,3.52342313622563,5.73409842187843,2.64342657158052,2.80254281490768,1.31692042387539,8.06510057466716,5.50215067848831,11.1024809459735,2.17342444007882,9.12582346574053,6.15482147455153,5.84480185223734,1.33692548262208,3.53527088969805,3.32300841875432,2.16643091012012,1.5370958367081,1.30059347559878,0.328875809207352,0,0.869409257205157,7.71090128442714,4.81573490561484,2.09071047609954,0.679856056185397,8.43085085924227,7.55980380061786,4.30133476433155,1.27426165729639,1.95325036156926,1.90090408889675,1.50575119077773,0.76791966692651,0,1.4206635122641,2.46338399076314,12.4996180799334,10.4301676355568,9.12393744461634,0,0,0.383587685530591,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.351339142772504,1.17881167947941,1.09288586487763,1.11235332835329,0,0.696518949197069,0.398873881556595,1.66943437013739,1.71598473234038,1.11437250398869,0,0,0,0.56530794192401,0,0,0,0.258416759169329,1.06729878806013,0,0.402829317109147,0,0.488124115096339,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,2.63560834872127,3.87780264148325,0.436094052142534,0.496971951695318,0.25326102332916,0.529636723252875,0,0,0,0,0,0.311211035399766,0.404132016209064,0,0.151357427644931,0.576175924479999,0.234321431833797,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0,0.408308342509787,0.245668634623536,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.226864366320042,0.358779271377724,0,0.423863802319124,0.600182192168805,0.103052529238439,1.03056216018252,0,0.337552664482532,0.0974370051611986,0,0,0,0.710019185033229,0.201504196455281,0.169560592310488,1.15956511897978,1.09098448236334,0.860413786167011,0.243947412259191,0.662648841607426,0.464775771478074,0.518305275076852,0.504641701751257,1.09493207722749,0,0,0,0.464367928031979,0,0.236613600079688,0,0.723033089650446,0.330881918197182,0,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0.983907508344908,0.514703430895577,0.768251997860379,0,0.804231779293047,0.740707561268237,0,0,0,0.34779121492523,0.234817388471643,0.721832238805369,0,0.190254152234598,0.790204397959275,0.858486162094873,0.246217006087397,0.234004265139238,0,0,1.17587489739202,0.425325291727159,0.716468181622786,0.290633938513962,0,0,0.264145302039678,0.829312462163088,0.864719720501769,2.01987893482208,0,0,0,0,0,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0,0,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0,0,0.358121926479791,0.224170287987055,9.26044572949058,8.84073056924021,6.93052395910641,0,0,0.773288812777695,0.167516265334349,0,0,2.99161459204025,1.24324654030811,0.12269149171914,0,0.271265023699736,0.623912584592421,0,0.315404830067869,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,2.89475236572042,3.45142721309787,1.60091336705167,0.303127571446259,1.66435439510497,0.30239029332968,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0.160853921143607,0,0.308419387605311,0.177561725313127,0.410635780069046,0,0,0.725156697549733,1.20303882181971,0.368323955743585,0.114814448164607,0.182091168006717,0.393373244878272,0.451199612907412,0.539107359730903,0,0,0.316654886678627,0,0.170093705276516,0.431831832204279,0,0.812839312631559,0,0.254876273045038,0.831076008928724,0,0.219259876645935,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0.247528499761764,1.14853107599234,1.95018073810956,0,0,0.154048617114644,0.15350367472613,0,0.537101224341368,0.290033387828457,0.0852266274161009,0,1.81813406897076,2.30628080838127,6.25302291223462,0.910420027699949,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.572499546967965,0.372158369359667,0,0.190630193923825,0.255897791311334,0,0,0,0.359744915166629,0.274537029736055,0,0.404364963146632,1.58510321173008,0,0,0.487426979262569,1.05650146756755,0.2729998228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| |||
|short_description=p2@SEC22A | |||
}} |
Revision as of 20:58, 21 January 2014
Short description: | p2@SEC22A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SEC22A_5end |
Coexpression cluster: | C22_CD4_CD8_Natural_Basophils_CD14_Peripheral_CD19 |
Association with transcript: | 0bp_to_ENST00000466519_5end |
EntrezGene: | SEC22A |
HGNC: | 20260 |
UniProt: | C9JZ27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.06e-27 | 52 |
lymphocyte | 5.55e-27 | 53 |
common lymphoid progenitor | 5.55e-27 | 53 |
leukocyte | 3.60e-22 | 136 |
mature alpha-beta T cell | 1.48e-20 | 18 |
alpha-beta T cell | 1.48e-20 | 18 |
immature T cell | 1.48e-20 | 18 |
mature T cell | 1.48e-20 | 18 |
immature alpha-beta T cell | 1.48e-20 | 18 |
hematopoietic stem cell | 9.18e-17 | 168 |
hematopoietic cell | 3.89e-15 | 177 |
nongranular leukocyte | 8.94e-15 | 115 |
B cell | 7.85e-14 | 14 |
hematopoietic lineage restricted progenitor cell | 1.10e-13 | 120 |
T cell | 1.56e-13 | 25 |
pro-T cell | 1.56e-13 | 25 |
hematopoietic oligopotent progenitor cell | 4.69e-13 | 161 |
hematopoietic multipotent progenitor cell | 4.69e-13 | 161 |
CD4-positive, alpha-beta T cell | 2.73e-12 | 6 |
CD8-positive, alpha-beta T cell | 6.78e-12 | 11 |
lymphocyte of B lineage | 3.76e-11 | 24 |
pro-B cell | 3.76e-11 | 24 |
granulocyte | 3.71e-10 | 8 |
natural killer cell | 4.56e-07 | 3 |
pro-NK cell | 4.56e-07 | 3 |
blood cell | 4.88e-07 | 11 |
naive T cell | 6.42e-07 | 3 |