FFCP PHASE1:Hg19::chr3:119278515..119278527,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=941 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1700 | |||
|TSSclassifier=strong | |||
|UniProt=A0N0P2,P33681 | |||
|association_with_transcript=-34bp_to_NM_005191,uc003ecq.2_5end | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_5_at_CD80_5end | |||
|id=chr3:119278515..119278527,- | |||
|ontology_enrichment_celltype=CL:0000738!3.90e-29!140;CL:0000945!5.42e-27!24;CL:0000826!5.42e-27!24;CL:0002031!1.25e-26!124;CL:0000988!1.43e-25!182;CL:0002032!1.69e-24!165;CL:0000837!1.69e-24!165;CL:0002087!4.12e-23!119;CL:0000037!4.56e-23!172;CL:0000566!4.56e-23!172;CL:0000542!4.67e-21!53;CL:0000051!4.67e-21!53;CL:0000838!1.81e-19!52;CL:0000990!1.57e-17!8;CL:0000451!3.94e-14!10;CL:0000453!1.96e-11!5;CL:0000557!2.25e-09!71;CL:0000840!7.44e-09!5;CL:0001029!7.44e-09!5;CL:0000839!2.51e-08!70;CL:0000763!8.47e-08!112;CL:0000049!8.47e-08!112;CL:0000236!1.04e-07!14;CL:0000766!2.20e-07!76;CL:0000785!3.34e-07!2;CL:0000955!3.34e-07!2;CL:0000818!3.34e-07!2;CL:0000954!3.34e-07!2;CL:0000816!3.34e-07!2;CL:0002009!4.45e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.25e-39;24!CL:0000453;1.23e-27;5!CL:0000990;2.01e-23;8!CL:0000451;3.74e-19;10!CL:0000542;2.09e-13;53!CL:0000946;1.76e-09;1!CL:0000786;1.76e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.01e-39,24;CL:0000826,1.01e-39,24;CL:0000453,1.27e-27,5;CL:0000838,1.67e-24,52;CL:0000542,5.32e-24,53;CL:0000051,5.32e-24,53;CL:0000990,2.26e-23,8;CL:0000988,2.95e-21,177;CL:0000738,6.77e-21,136;CL:0000451,4.12e-19,10;CL:0002032,3.71e-17,161;CL:0000837,3.71e-17,161;CL:0002031,1.13e-16,120;CL:0000037,2.62e-16,168;CL:0002087,2.38e-15,115;CL:0000236,1.25e-09,14;CL:0000946,1.25e-09,1;CL:0000786,1.25e-09,1;CL:0000980,1.25e-09,1 | |||
|ontology_enrichment_development_v019=CL:0000051;2.09e-13;53 | |||
|ontology_enrichment_disease=DOID:0060058!6.89e-11!10 | |||
|ontology_enrichment_disease_v019=DOID:630;7.50e-10;1!DOID:0050177;7.50e-10;1!DOID:0050427;7.50e-10;1!DOID:0060060;8.90e-10;1!DOID:0060061;8.90e-10;1!DOID:8691;8.90e-10;1!DOID:4960;1.76e-09;1!DOID:0070004;1.76e-09;1!DOID:0060058;4.06e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.50e-10,1;DOID:0050177,7.50e-10,1;DOID:0050427,7.50e-10,1;DOID:0060060,8.91e-10,1;DOID:0060061,8.91e-10,1;DOID:8691,8.91e-10,1;DOID:4960,2.26e-09,1;DOID:0070004,2.26e-09,1;DOID:0060058,4.11e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.47e-15!112;UBERON:0002390!4.80e-15!102;UBERON:0003061!4.80e-15!102;UBERON:0002405!2.70e-12!115;UBERON:0004177!6.01e-11!7;UBERON:0002106!5.56e-10!3;UBERON:0004854!5.56e-10!3;UBERON:0009034!5.56e-10!3;UBERON:0002095!5.56e-10!3;UBERON:0004782!5.56e-10!3;UBERON:0003281!5.56e-10!3;UBERON:0009664!5.56e-10!3;UBERON:0002296!5.56e-10!3;UBERON:0005602!5.56e-10!3;UBERON:0001179!5.56e-10!3;UBERON:0006293!5.56e-10!3;UBERON:0002371!5.38e-09!80;UBERON:0001474!4.48e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.92e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.92e-08,10;UBERON:0000358,2.92e-08,10;UBERON:0000307,2.92e-08,10;UBERON:0000091,2.92e-08,10;UBERON:0000087,2.92e-08,10;UBERON:0007010,2.92e-08,10;UBERON:0007806,2.92e-08,10;UBERON:0008780,2.92e-08,10;UBERON:0005728,2.92e-08,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,1.60468152070698,2.29881650459848,1.73163718890094,0,0,0,0,0,0,0,1.27952309238679,0,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0.580418477257168,0,2.4912889959823,0.251248665256743,0,0,0,1.47311054395026,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,1.70763890732835,4.11066032559657,1.14681968437569,0,0,0,0,0,0.205601498999509,0,0,0,0,0.334231370655521,0.294605907474837,0,0,0.512365278902701,0.910415432919148,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649094787309367,1.21890816109487,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0.432359860250884,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,11.5699717133405,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,9.78519724646052,8.40234784836219,9.81566325351281,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,1.349843349309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0.852548188666271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.593068487784,10.230592704129,19.1371511279338,0,0,0,3.39978572953381,0,1.20550485762571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72850981333669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,0,0.0939839179798536,0.580120991762195,10.5937625280425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.258355639344024,0.682821857254437,0,0,0,0.217716747896961,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0,5.77023286145819 | |||
|short_description=p5@CD80 | |||
}} |
Revision as of 20:47, 21 January 2014
Short description: | p5@CD80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CD80_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -34bp_to_NM_005191, uc003ecq.2_5end |
EntrezGene: | CD80 |
HGNC: | 1700 |
UniProt: | A0N0P2P33681 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.01e-39 | 24 |
pro-B cell | 1.01e-39 | 24 |
Langerhans cell | 1.27e-27 | 5 |
lymphoid lineage restricted progenitor cell | 1.67e-24 | 52 |
lymphocyte | 5.32e-24 | 53 |
common lymphoid progenitor | 5.32e-24 | 53 |
conventional dendritic cell | 2.26e-23 | 8 |
hematopoietic cell | 2.95e-21 | 177 |
leukocyte | 6.77e-21 | 136 |
dendritic cell | 4.12e-19 | 10 |
hematopoietic oligopotent progenitor cell | 3.71e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.71e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 1.13e-16 | 120 |
hematopoietic stem cell | 2.62e-16 | 168 |
nongranular leukocyte | 2.38e-15 | 115 |
B cell | 1.25e-09 | 14 |
antibody secreting cell | 1.25e-09 | 1 |
plasma cell | 1.25e-09 | 1 |
plasmablast | 1.25e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.92e-08 | 10 |
blastocyst | 2.92e-08 | 10 |
blastula | 2.92e-08 | 10 |
bilaminar disc | 2.92e-08 | 10 |
inner cell mass | 2.92e-08 | 10 |
cleaving embryo | 2.92e-08 | 10 |
connecting stalk | 2.92e-08 | 10 |
inner cell mass derived epiblast | 2.92e-08 | 10 |
extraembryonic mesoderm | 2.92e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.50e-10 | 1 |
monogenic disease | 7.50e-10 | 1 |
xeroderma pigmentosum | 7.50e-10 | 1 |
non-Hodgkin lymphoma | 8.91e-10 | 1 |
cutaneous T cell lymphoma | 8.91e-10 | 1 |
mycosis fungoides | 8.91e-10 | 1 |
bone marrow cancer | 2.26e-09 | 1 |
myeloma | 2.26e-09 | 1 |
lymphoma | 4.11e-08 | 10 |