FFCP PHASE1:Hg19::chr3:98589837..98589843,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:98589837..98589843,- | |||
|id=chr3:98589837..98589843,- | |||
|ontology_enrichment_celltype=CL:0000220!2.70e-08!246;CL:0002321!4.68e-08!248;CL:0000133!1.61e-07!59;CL:0002319!6.83e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000064;3.75e-22;3!CL:0000067;3.75e-22;3!CL:0005012;3.75e-22;3!CL:0002304;3.75e-22;3!CL:0002573;1.13e-10;2!CL:0002379;3.32e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.99e-22,3;CL:0000067,1.99e-22,3;CL:0005012,1.99e-22,3;CL:0002304,1.99e-22,3;CL:0002573,1.06e-10,2;CL:0002379,5.07e-08,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.73e-12!239;DOID:2394!4.77e-12!14;DOID:162!5.49e-12!235;DOID:120!5.05e-10!27;DOID:193!6.59e-09!29;DOID:0050687!1.56e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:120;9.56e-09;27!DOID:0060085;3.32e-08;1!DOID:3165;3.32e-08;1!DOID:0060121;3.32e-08;1!DOID:3620;3.32e-08;1!DOID:2438;3.32e-08;1!DOID:4418;3.32e-08;1!DOID:3565;3.32e-08;1!DOID:3112;3.32e-08;1!DOID:2394;3.76e-08;14!DOID:193;4.17e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:120,7.30e-09,27;DOID:0060085,2.17e-08,1;DOID:3165,2.17e-08,1;DOID:0060121,2.17e-08,1;DOID:2438,2.17e-08,1;DOID:4418,2.17e-08,1;DOID:193,3.25e-08,29;DOID:2394,3.49e-08,14;DOID:3620,5.07e-08,1;DOID:3565,5.07e-08,1;DOID:3112,5.43e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000992!2.68e-08!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;3.75e-22;3!UBERON:0001775;3.75e-22;3!UBERON:0000488;9.18e-17;4!UBERON:0002203;2.37e-11;6!UBERON:0001768;2.37e-11;6!UBERON:0002200;2.37e-11;6!UBERON:0002119;8.51e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.99e-22,3;UBERON:0001775,1.99e-22,3;UBERON:0000488,5.73e-17,4;UBERON:0002203,1.74e-11,6;UBERON:0001768,1.74e-11,6;UBERON:0002200,1.74e-11,6;UBERON:0002119,8.83e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0.218441372130172,0,0,0,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0,0,0,1.23186982565596,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,1.98523116044542,3.1042115644759,4.21606971327005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19168262731897,0.573673241497627,0,0,0,0,0,0.67355336034844,0,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0.421352420106746,0.408308342509787,0.368502951935304,0.103325781175765,0,0,0,0,0,0.375355559615893,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0.168776332241266,0,1.00973509697646,0.184099797284599,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0,0,0,0,0.115930404975077,0,0,0,0.570762456703795,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.904318131178758,0,1.89948683245908,0,0,0,0,0,0,0.289562613335158,1.43833425785268,0.358121926479791,0,0.197030760201927,0,0,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0.347534457872331,0,0,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.321707842287215,0,0,0,0.164254312027618,0,0,0,1.40354529212299,0.368323955743585,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0.616194468458578,0.614014698904518,1.37836572484531,0.859361958946189,0.145016693914229,0.511359764496605,0,0.165284915360978,0.192190067365106,1.02090169995667,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.179872457583315,0,0.824686816419805,0,0,0,0,0.731140468893853,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0.111443384277478,1.98895302764489,0,0,0,0,0.281338832821026,0.779160935160341,0,0,0,0,0,0.409074730008619,0.123084805461069,0,1.43789361835723,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0.455173793141999,0,0,0.344743373241465,0,0.520874984799877,0.885741385813839,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,1.89898258075224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0.330991955875499,0,0,0.569219092059585,0.832048038078832,0,0,0,0,0.171986032471617,0.0967563312890851,0,0.0821154570532092,0,0,0,0.959293472527256,1.58971689362392,0,0,0.400794101257669,0,0,0.288180834308212,0,0,0,0.745515213392595,0.235694034616795,0.815425236441684,0.523014231561666,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0.157566364614447,0.164831716762333,0.13480708770837,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0.211200673038813,0,0,0,0,0,0,0,0,0,0.328370082997356,1.19271615249795,0.113312091520126,0,0,0,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0.415045904808692,0.499921631848426,0,0.285465333544967,1.17632909849086,0,0.28984205722165,0.447764408660622,0.467426619694449,0,0,0.251567901752575,0.889811221596536,0.228840068396924,0.756154618816195,0.621748802331122,0.591420599958536,1.27437413730962,0.899606224327209,0.310525913752519,1.24411862352257,0.797525143673985,0.521745061811734,0.601030435988874,1.52322084867518,0,0.727394636810238,0.644463342254931,0.928067519756987,3.18476710958893,0,0,0,0,0,0,0.521988583930423,0.226705925512272,0,0,0,0,0.438568099157414,0.353378291891762,0,1.18259708457151,2.30617366729152,0.345430341731199,0.303859956177382,0,0,0,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0.368211900503681,0,0,0,0,0.157265941855896,0.218419276384028,0,0,0.123935764259002,0,0,0.23658523500376,0,0,0,0,0,0,0,0.756215088665154,0,0,0,0.294443155503077,0.11796972334774,0,0.577628330751691,0.381382095467167,0,0,0,0.80682027481408,0,0,1.14640342257068,0.147856086217045,0,0.781078098613847,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.115233987555779,0.171488009437418,0,0,0.118193840883968,1.00108261702862,0,0.157115589916002,0,0,0,0,0,0.316027223465453,0,0,0,0.414432328326074,0,0,0,3.19496401972526,2.47118873801557,0,1.60374807980835,0,0.955538938977433,0.111855431797792,0.196300467230486,0,0,0,0,0,0,0.596852325484105,0.118920090777569,0,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| |||
|short_description=p@chr3:98589837..98589843,- | |||
}} |
Revision as of 20:06, 21 January 2014
Short description: | p@chr3:98589837..98589843, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:98589837..98589843, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.99e-22 | 3 |
ciliated epithelial cell | 1.99e-22 | 3 |
multi-ciliated epithelial cell | 1.99e-22 | 3 |
non-pigmented ciliary epithelial cell | 1.99e-22 | 3 |
Schwann cell | 1.06e-10 | 2 |
meningothelial cell | 5.07e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.99e-22 | 3 |
ciliary body | 1.99e-22 | 3 |
atypical epithelium | 5.73e-17 | 4 |
vasculature of eye | 1.74e-11 | 6 |
uvea | 1.74e-11 | 6 |
vasculature of head | 1.74e-11 | 6 |
left ovary | 8.83e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
female reproductive organ cancer | 7.30e-09 | 27 |
organ system benign neoplasm | 2.17e-08 | 1 |
skin benign neoplasm | 2.17e-08 | 1 |
integumentary system benign neoplasm | 2.17e-08 | 1 |
dermis tumor | 2.17e-08 | 1 |
cutaneous fibrous histiocytoma | 2.17e-08 | 1 |
reproductive organ cancer | 3.25e-08 | 29 |
ovarian cancer | 3.49e-08 | 14 |
central nervous system cancer | 5.07e-08 | 1 |
meningioma | 5.07e-08 | 1 |
papillary adenocarcinoma | 5.43e-08 | 1 |