FFCP PHASE1:Hg19::chr3:94159877..94159883,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C322 | |||
|description=CAGE_peak_at_chr3:94159877..94159883,- | |||
|id=chr3:94159877..94159883,- | |||
|ontology_enrichment_celltype=CL:0000066!4.52e-13!254;CL:0000076!2.42e-11!62;CL:0000077!4.37e-08!19;CL:0002076!1.21e-07!43;CL:0002368!5.60e-07!13;CL:0000223!9.03e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1001319;5.16e-21;1!CL:1000600;5.16e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,4.22e-21,1;CL:1000600,4.22e-21,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;4.28e-17;5!UBERON:0009847;6.78e-08;3!UBERON:0003353;6.78e-08;3 | |||
|ontology_enrichment_disease=DOID:162!3.44e-17!235;DOID:14566!1.43e-16!239;DOID:305!3.68e-16!106;DOID:0050687!4.37e-15!143;DOID:1749!4.76e-12!14;DOID:4231!9.89e-07!2;DOID:1907!9.89e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3112;2.30e-21;1!DOID:1749;1.98e-13;14!DOID:4231;3.34e-11;2!DOID:1907;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,2.30e-21,1;DOID:1749,1.90e-13,14;DOID:4231,3.35e-11,2;DOID:1907,3.35e-11,2;DOID:305,6.21e-09,106;DOID:0050687,1.65e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0000060!7.25e-08!12;UBERON:0002394!2.18e-07!4;UBERON:0003928!2.18e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;5.16e-21;1!UBERON:0007195;5.16e-21;1!UBERON:0001256;5.16e-21;1!UBERON:0001259;5.16e-21;1!UBERON:0002046;4.28e-17;5!UBERON:0001255;3.34e-11;2!UBERON:0001556;3.34e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,4.22e-21,1;UBERON:0001256,4.22e-21,1;UBERON:0001259,4.22e-21,1;UBERON:0007195,6.31e-21,1;UBERON:0002046,4.28e-17,5;UBERON:0004117,4.28e-17,5;UBERON:0007689,4.28e-17,5;UBERON:0007123,4.28e-17,5;UBERON:0003091,4.28e-17,5;UBERON:0001255,3.02e-11,2;UBERON:0001556,3.02e-11,2;UBERON:0009722,2.72e-08,11;UBERON:0007690,2.72e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.765676274967505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52776196950456,0,0,0,0,1.11136990144637,0,0,0,0,0,0,1.0241410345695,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0.870592065804026,0,0.171986032471617,0.0967563312890851,0,0,0,0,0,0.822251547880505,0.397429223405979,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19170628885091,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0.606596470166591,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0,0,0,0.400027764663154,0,0,0,0,0.857766365499703,0.521988583930423,0.453411851024545,0,0.244736704506468,0.179088841081487,0,0.657852148736121,0,0.578742114812744,0,0,0,0,0,0,0,0,0,0.983091635014877,0.211312123358627,0,0,0,1.13503190713367,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0,2.62035068016155,0.887136517302272,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0,0,0,0,0,1.00108261702862,0,0,0,0,0.431855182437243,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,1.76447435857846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.27938430451435,0,0,0,0,0,0,0,1.13964576055364,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:94159877..94159883,- | |||
}} |
Revision as of 20:01, 21 January 2014
Short description: | p@chr3:94159877..94159883, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:94159877..94159883, - |
Coexpression cluster: | C322_thyroid_anaplastic_gastric_testis_papillary_fibrous_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 4.22e-21 | 1 |
lower urinary tract cell | 4.22e-21 | 1 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 4.22e-21 | 1 |
wall of urinary bladder | 4.22e-21 | 1 |
mucosa of urinary bladder | 4.22e-21 | 1 |
stroma of bone marrow | 6.31e-21 | 1 |
thyroid gland | 4.28e-17 | 5 |
pharyngeal pouch | 4.28e-17 | 5 |
thyroid diverticulum | 4.28e-17 | 5 |
pharyngeal pouch 2 | 4.28e-17 | 5 |
thyroid primordium | 4.28e-17 | 5 |
urinary bladder | 3.02e-11 | 2 |
lower urinary tract | 3.02e-11 | 2 |
entire pharyngeal arch endoderm | 2.72e-08 | 11 |
early pharyngeal endoderm | 2.72e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.30e-21 | 1 |
squamous cell carcinoma | 1.90e-13 | 14 |
histiocytoma | 3.35e-11 | 2 |
malignant fibroxanthoma | 3.35e-11 | 2 |
carcinoma | 6.21e-09 | 106 |
cell type cancer | 1.65e-08 | 143 |