FFCP PHASE1:Hg19::chr3:63953415..63953430,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6314 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10560 | |||
|TSSclassifier=strong | |||
|UniProt=E9PHP9,B4E207 | |||
|association_with_transcript=0bp_to_ENST00000484332,NM_001128149_5end | |||
|description=CAGE_peak_15_at_ATXN7_5end | |||
|id=chr3:63953415..63953430,+ | |||
|ontology_enrichment_celltype=CL:0000791!7.87e-25!18;CL:0000789!7.87e-25!18;CL:0002420!7.87e-25!18;CL:0002419!7.87e-25!18;CL:0000790!7.87e-25!18;CL:0000084!7.24e-22!25;CL:0000827!7.24e-22!25;CL:0000625!2.04e-16!11;CL:0000037!1.90e-13!172;CL:0000566!1.90e-13!172;CL:0000838!2.87e-13!52;CL:0000542!7.39e-13!53;CL:0000051!7.39e-13!53;CL:0000988!8.84e-12!182;CL:0002032!4.67e-11!165;CL:0000837!4.67e-11!165;CL:0000624!4.76e-09!6;CL:0000738!5.22e-09!140 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.38e-29;11!CL:0000791;5.33e-29;18!CL:0000789;5.33e-29;18!CL:0002419;5.33e-29;18!CL:0000097;1.07e-21;5!CL:0000084;1.73e-20;25!CL:0000163;3.83e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.72e-29,11;CL:0000791,4.19e-29,18;CL:0000789,4.19e-29,18;CL:0002420,4.19e-29,18;CL:0002419,4.19e-29,18;CL:0000790,4.19e-29,18;CL:0000097,8.95e-22,5;CL:0002028,8.95e-22,5;CL:0000084,1.45e-20,25;CL:0000827,1.45e-20,25;CL:0000163,3.47e-12,9;CL:0000738,2.11e-09,136;CL:0000838,3.82e-09,52;CL:0000542,6.04e-09,53;CL:0000051,6.04e-09,53;CL:0002031,3.50e-08,120;CL:0000037,4.90e-07,168 | |||
|ontology_enrichment_development_v019=CL:0000790;5.33e-29;18 | |||
|ontology_enrichment_disease=DOID:1240!5.68e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.16e-19!115;UBERON:0000178!1.24e-08!15;UBERON:0000179!1.24e-08!15;UBERON:0000463!1.24e-08!15;UBERON:0004177!3.59e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.51e-14;2!UBERON:0005058;1.51e-14;2!UBERON:0009113;1.51e-14;2!UBERON:0000178;3.37e-07;15!UBERON:0000179;3.37e-07;15!UBERON:0000463;3.37e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.61e-08,4;UBERON:0005058,7.61e-08,4;UBERON:0009113,7.61e-08,4;UBERON:0003295,7.61e-08,4;UBERON:0005562,7.61e-08,4;UBERON:0000178,4.20e-07,15;UBERON:0000179,4.20e-07,15;UBERON:0000463,4.20e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.393364276848904,2.30297638858328,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0.217010870715852,0,1.29557466407592,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,1.96709770113833,0.786021525498329,0.616804496998528,0.501559486172034,2.28145586643513,1.4203434172042,0,0.111410456885174,0.294605907474837,0.221533894583621,1.35401931882508,0.25618263945135,0.390178042679635,0.328875809207352,0.552700035571697,0.289803085735052,2.22429844743091,2.1403266247177,2.09071047609954,0.679856056185397,0.766440987203842,0.68725489096526,1.51811815211702,1.91139248594458,0.651083453856419,3.8018081777935,1.50575119077773,3.83959833463255,1.24930726552346,2.13099526839615,0.821127996921047,1.00803371612366,0.802320587350522,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49682337822484,1.24396869324463,1.8735593944205,3.02981840223312,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.591092280605782,0.646882724578552,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,0.952927101831156,0.822724546172388,1.29694662238543,0,1.58625035258854,0,0,0,0,0.144269212976445,0.142283686696828,0.318852545457645,0,0.191505370132367,0.423347165447766,0,0.561594356226918,0.228234679033192,0,0,0,0.321176150207399,0.201799707191048,0,0.343505344755765,0,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0,0.99921590399346,0,0,0.146508179271894,0,0.334330152832435,0,0,0,0,0,0.140669416410513,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.995213339381022,0.591095237907095,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.627921025580099,0.332423363800313,0,0,0,0,0.953619473882272,0,0,0.141353071433941,0.649165919226273,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0.0633107959558787,0,0,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0.171086837884329,0,0.320362237703084,0,0,0.496166021811951,0.197611631897944,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0.342976018874837,0,0.131545547125698,0,0,0.156986185701028,0,0,0,0,0,0.500335809236594,0.790068058663633,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0.245148321753905,0,0,0.297046400327086,0,0,0.469919589899268,0.193373663920732,0,0,0,0,1.46067277649303,0.458729283404541,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,1.80848947540817,2.48298857183432,0,0.0636471582781649,0,0.217716747896961,0,0.404112318087525,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p15@ATXN7 | |||
}} |
Revision as of 19:35, 21 January 2014
Short description: | p15@ATXN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_ATXN7_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000484332, NM_001128149_5end |
EntrezGene: | ATXN7 |
HGNC: | 10560 |
UniProt: | E9PHP9B4E207 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.72e-29 | 11 |
mature alpha-beta T cell | 4.19e-29 | 18 |
alpha-beta T cell | 4.19e-29 | 18 |
immature T cell | 4.19e-29 | 18 |
mature T cell | 4.19e-29 | 18 |
immature alpha-beta T cell | 4.19e-29 | 18 |
mast cell | 8.95e-22 | 5 |
basophil mast progenitor cell | 8.95e-22 | 5 |
T cell | 1.45e-20 | 25 |
pro-T cell | 1.45e-20 | 25 |
endocrine cell | 3.47e-12 | 9 |
leukocyte | 2.11e-09 | 136 |
lymphoid lineage restricted progenitor cell | 3.82e-09 | 52 |
lymphocyte | 6.04e-09 | 53 |
common lymphoid progenitor | 6.04e-09 | 53 |
hematopoietic lineage restricted progenitor cell | 3.50e-08 | 120 |
hematopoietic stem cell | 4.90e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
thymus | 7.61e-08 | 4 |
hemolymphoid system gland | 7.61e-08 | 4 |
thymic region | 7.61e-08 | 4 |
pharyngeal gland | 7.61e-08 | 4 |
thymus primordium | 7.61e-08 | 4 |
blood | 4.20e-07 | 15 |
haemolymphatic fluid | 4.20e-07 | 15 |
organism substance | 4.20e-07 | 15 |