FFCP PHASE1:Hg19::chr3:61547194..61547205,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5793 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9671 | |||
|TSSclassifier=strong | |||
|UniProt=P23470,Q49A02 | |||
|association_with_transcript=-37bp_to_ENST00000495879,NM_002841,uc003dla.3,uc003dlb.2,uc003dlc.2_5end | |||
|description=CAGE_peak_5_at_PTPRG_5end | |||
|id=chr3:61547194..61547205,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!3.70e-18!59;UBERON:0001049!6.29e-17!57;UBERON:0005068!6.29e-17!57;UBERON:0006241!6.29e-17!57;UBERON:0007135!6.29e-17!57;UBERON:0000924!6.44e-17!173;UBERON:0006601!6.44e-17!173;UBERON:0005743!1.23e-16!86;UBERON:0001017!1.40e-16!82;UBERON:0004121!3.11e-16!169;UBERON:0000033!6.50e-16!123;UBERON:0000073!6.63e-16!94;UBERON:0001016!6.63e-16!94;UBERON:0000955!1.44e-15!69;UBERON:0006238!1.44e-15!69;UBERON:0000153!1.29e-14!129;UBERON:0007811!1.29e-14!129;UBERON:0000475!2.32e-14!365;UBERON:0002346!3.52e-14!90;UBERON:0003075!1.55e-13!86;UBERON:0007284!1.55e-13!86;UBERON:0001869!1.70e-13!32;UBERON:0002020!3.17e-13!34;UBERON:0003528!3.17e-13!34;UBERON:0003080!3.50e-13!42;UBERON:0002780!4.95e-13!41;UBERON:0001890!4.95e-13!41;UBERON:0006240!4.95e-13!41;UBERON:0000481!1.12e-12!347;UBERON:0001893!1.20e-12!34;UBERON:0002619!3.85e-12!22;UBERON:0002791!4.28e-12!33;UBERON:0003056!3.80e-11!61;UBERON:0001950!6.82e-11!20;UBERON:0000477!1.43e-10!286;UBERON:0000483!2.03e-10!309;UBERON:0000956!2.10e-10!25;UBERON:0000203!2.10e-10!25;UBERON:0000119!2.62e-10!312;UBERON:0007023!5.49e-10!115;UBERON:0004111!5.75e-09!241;UBERON:0000025!1.99e-07!194;UBERON:0000468!3.01e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.54e-20;22!UBERON:0001950;1.93e-17;20!UBERON:0001869;3.02e-17;32!UBERON:0000956;1.04e-16;25!UBERON:0000203;1.04e-16;25!UBERON:0002791;1.12e-16;32!UBERON:0003528;8.88e-16;34!UBERON:0002020;8.88e-16;34!UBERON:0001893;1.08e-15;34!UBERON:0002780;4.11e-13;41!UBERON:0001890;4.11e-13;41!UBERON:0000073;1.43e-11;53!UBERON:0002616;1.43e-11;53!UBERON:0000955;1.15e-08;68!UBERON:0001017;5.81e-08;75!UBERON:0000349;4.27e-07;5!UBERON:0000922;5.60e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.19e-21,32;UBERON:0000073,2.48e-21,53;UBERON:0002616,2.48e-21,53;UBERON:0001049,3.07e-21,56;UBERON:0005068,3.07e-21,56;UBERON:0006241,3.07e-21,56;UBERON:0007135,3.07e-21,56;UBERON:0002619,3.93e-21,22;UBERON:0001017,1.37e-20,81;UBERON:0001893,6.41e-20,34;UBERON:0003528,7.42e-20,34;UBERON:0002020,7.42e-20,34;UBERON:0002780,1.13e-19,41;UBERON:0001890,1.13e-19,41;UBERON:0003080,1.13e-19,41;UBERON:0006240,1.13e-19,41;UBERON:0002791,1.16e-19,32;UBERON:0000955,1.38e-19,68;UBERON:0006238,1.38e-19,68;UBERON:0001016,5.38e-19,89;UBERON:0001950,1.34e-18,20;UBERON:0000956,6.63e-18,25;UBERON:0000203,6.63e-18,25;UBERON:0003075,1.97e-16,82;UBERON:0007284,1.97e-16,82;UBERON:0002346,3.74e-16,86;UBERON:0004121,5.61e-16,171;UBERON:0000924,5.61e-16,171;UBERON:0006601,5.61e-16,171;UBERON:0010314,8.29e-15,132;UBERON:0010371,1.70e-14,104;UBERON:0003056,2.68e-14,61;UBERON:0011216,8.40e-10,223;UBERON:0000349,9.24e-08,5;UBERON:0007023,1.36e-07,114;UBERON:0002021,1.90e-07,5;UBERON:0001871,7.67e-07,6 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.986680828671798,0,0,1.74467704820074,0,0,0.261185628199839,0,0,0.218441372130172,0.791300934685361,0.37129905888014,0.662794751455832,1.34465029290355,0,0,0.975865597581014,0.246242116153576,1.02000345622126,0.313454721478088,0,0.410623275218653,0.251085279189606,3.66784347590166,3.36612416744778,3.62069594042925,0,0,0,0,0.6024118375565,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,0,0,0.869079113764942,0,0.973269740605272,1.22895262313288,0.886917589850256,0.263504357079378,0.851363990735132,0.364295288292542,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0.825354125820202,0.626984899610432,0.775250277507987,1.42306505074684,0.66944122552934,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.625098097988558,0.673588117878509,0.563057402416611,1.53316637465883,0,0.366403487860815,0,0,0,1.49091585508596,0.759783069987479,0.794455084879313,0.573673241497627,0.354668382198357,1.12135520028461,0,0,0.622422070799533,0.808264032418128,0.490385709340376,0.605429710579726,2.30470369792,0.234321431833797,0.624320153660641,1.1409436430889,1.19558944441441,0.822041490506354,1.13311061057692,0.421352420106746,0.816616685019573,0.491337269247072,1.54988671763648,4.75201142912821,1.48360157567134,0,0,0.841680569770331,0.875829639103749,1.10825646193673,0.438977620880838,1.83892677479412,2.40380894250555,0.453728732640084,0.717558542755448,0.640672166455702,0.635795703478686,0.600182192168805,0.515262646192195,0.515281080091258,0.18611685633159,0.337552664482532,0,1.00973509697646,0.460249493211497,0.161646056818812,0.355009592516614,0.403008392910561,0.67824236924195,0,0.272746120590835,1.14721838155602,1.82960559194393,1.19276791489337,0.348581828608555,1.0366105501537,1.00928340350251,2.91981887260664,1.56449532329816,1.28648187638577,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,0.491953754172454,0.171567810298526,0.98775256867763,0,0.201057944823262,1.29623823221941,0,1.03993478527958,0,0.579652024875384,1.40890433082986,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0.671928512795438,0.283550194484773,0,0.290633938513962,0,0,0,0,0,0,0.253991577168676,0.381988425558278,0,0,0.102827492703324,0,0.857479297891735,0.448524337381443,0,0.51336800074665,0.904902010304444,0,0.845302752556,0.797814349754612,2.08014873822732,0.257207374262142,1.41849132023278,0.532844358032199,1.14382394926518,0.542621605391443,0.823240336780769,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.499864955910285,0,0,0,0.958499421966331,1.14861935834114,0,0.289562613335158,0.410952645100767,0.179060963239896,0,0.197030760201927,0.215627574859517,0.256686072559497,0.76228387266739,0,0,0.167516265334349,0,0,0,0,2.4538298343828,2.00068208423871,1.08506009479894,0.415941723061614,0,0.946214490203608,2.10854546986884,0.300946099727719,0,0,0.664225598535437,0,0.521301686808497,0.391602314925481,1.37257369524342,0,0,0,0.606255142892519,0,0,0.744323423456331,1.38115775959256,1.12264037773229,0.384417447767103,0,0.804269605718038,0,0.154209693802656,0.355123450626254,0.246381468041427,0,0.464841513839837,0.725156697549733,0.601519410909855,0.736647911487171,1.03333003348146,0.728364672026868,0.655622074797121,0,0.15403067420883,0,1.46139224653261,0.527758144464379,0,0.510281115829547,0.647747748306418,0,0,0,0.254876273045038,0.831076008928724,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.206082023295445,0.183138929636687,0.165018999841176,0.574265537996172,0.650060246036521,0,0.48335359146061,0.462145851343933,1.07452572308291,0.689182862422653,1.39646318328756,0.870100163485371,0.426133137080504,0.0890320356467374,0.330569830721956,0.576570202095319,1.78657797492418,0.6069466851333,0.464845549297286,2.51849877464512,0.6970372701606,0.308033580176089,0,0,0,0.858749320451947,1.116475108079,1.58189712359363,1.5250415513906,0,0.855877976067841,0.636406495851874,0.78494864019923,0,0.823611089208164,0.471249609382746,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0.409499734223957,0.424216295861138,0,0,0,0.876901770507525,0,1.31178950409327,0.202910376962704,0,0.281695602532241,0.286822704408103,0.392996164052485,0,0,0.633322905892992,0.987884678879706,0,1.39973888097993,0.577332676353072,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0.245040215981032,0,0,0,0.637705090915289,0,0,0,0.649243880549111,0.842391534340376,0.456469358066384,0,2.50634477090067,0,0,0,0,0,0.307240764308458,0.223676107892416,0.667396566847634,0.390776190804081,0,0,0.270455678475983,0,2.81974010175699,0.748562161632879,0.586032717087576,0,0.111443384277478,0.568272293612826,0.23874448473769,0.296964680832639,0,2.98244294329889,1.82870241333667,0.890469640183247,0,0,1.39473591775749,0.276283915531148,0,0,2.58478091468246,1.86623752597084,0,0,0,0.591860433821602,0,1.11136990144637,0.969332746095218,1.11321717794222,0,0.260427761085233,0.524759999977174,0.724999575434793,0.682760689712998,0,0.236387681767936,0.344743373241465,0.583209226766509,1.21537496453305,3.54296554325536,1.92954301800653,3.05163472634166,1.65868889896837,3.25102380848902,1.31631238292384,0,0.139423744278603,0.615602068030377,0.455768223388005,0.23056390438806,0.359030577639089,0.108647371922008,0,0.457987967009312,0,0,0.31396051279005,0.498635045700469,0,0,0,0,0.635746315921515,1.47698645169619,1.14262965711403,0.565412285735763,1.51472047819464,0,0.265372693510018,1.22206028986725,2.07564790076435,3.83048210734159,2.29728288912002,0.269604531922708,1.60515529459758,1.1713222286267,0,0.19566461893209,0.242780379534093,0,0,1.22429104652196,0.758238955541855,0.300646838828985,0.311064574191741,0.664653872707185,2.64793564700399,0.627865836814451,2.38944859545918,0.569219092059585,0,0.520679215005393,0,0.261177619741208,1.39781334593624,0,0,0,0,0.290967049465258,0.264768380074501,0.225980740780532,1.09633539717401,0.397429223405979,2.02594547058812,0,0,1.28071796843612,1.39866726707491,1.29681375438695,1.71804894248874,0.857974989309823,0.576219191952599,1.24252535565433,0,0.135904206073614,0.104602846312333,0.101998217636322,0.288950589901519,0.600420288709789,0.958337652243951,0,0.429765441419957,0,1.39641200636127,0.458320848023367,0,0,0.858452096273142,0.446342914883745,0.873385142327441,0,2.32991899054908,0.945398187686684,0.576911008668165,0.539228350833479,0.196854963029498,0,6.36183751847443,1.77064427945048,2.57205037544031,2.61324929534744,2.07720169014593,0,0,2.24773359634691,0.335434687599266,0.788057072991982,1.52118305591495,1.26720403823288,0.717149357331379,0,0,1.32418394073086,0,0,0,0.653174720218818,0,0.574647645245373,1.36310417428337,0.113312091520126,0.293104467356165,0,1.68067843270016,0.92562821219883,0.342173675768659,0.704815022316672,0.533937062838473,2.35806457649499,0,0.992332043623902,4.14984426985683,1.33971858218986,0,0.544017803369474,0.2506898940227,1.83807346058077,0.655745261419609,0.314108192500469,2.65820453990096,1.34228891392159,1.6274820991845,1.14681839138014,0.665574309221114,0.869349641179368,0,0.74988244777264,0.454947352624943,2.28372266835974,1.17632909849086,0.468334905806882,0.434763085832475,0,0.233713309847224,1.10961172300523,0.189403005275089,0.251567901752575,1.77962244319307,0.228840068396924,0.756154618816195,0.310874401165561,0.443565449968902,0.63718706865481,0,0.310525913752519,0,0.265841714557995,0.521745061811734,0.450772826991655,0,1.22061219961398,0.545545977607678,0.429642228169954,1.39210127963548,1.19428766609585,0.800055529326307,0.343395705182793,1.34699795506368,0,0,0.428883182749851,0.260994291965212,0.226705925512272,0.231522474323834,0.244736704506468,0.537266523244462,0,0.438568099157414,0.176689145945881,0,0.337884881306145,1.28120759293973,0.345430341731199,0,2.35039341457942,0.194860308839388,0,0.163565394255844,0,0,0,0.79994958341972,0.853533837553127,0,0.567515953566836,0.920529751259204,0.839277046316667,0,0.511577485214607,0.970423302570136,0,0.109209638192014,0.33946505990805,1.70059936081346,0.867550349813015,0,0.954013051960256,0,0,1.05802783107205,0,1.41304295212211,1.41696576325585,1.91560630868582,3.28186182785208,1.76450187355203,1.65977405914123,2.26065903884592,0,0.196295437002051,0.707818340086442,0.366857197043358,0.115525666150338,1.90691047733584,0,0.596748666348824,0.225630985047772,0.60511520611056,0.781514011233092,0.261906694481422,0,0,1.89105236931505,0.781078098613847,1.65349437200947,2.28296916698065,3.28184885410932,0,0.992422356778588,0.527613733078862,0.127762427639595,0,0.336283722218824,1.82089681270989,1.59363533945908,0.0887023701626388,0,0.171488009437418,0.475788130837822,0.855046056317038,0.709163045303809,0,0.627944742804112,1.88538707899202,0.560544326627578,0,0.215927591218621,0,0.857718530119876,0.632054446930906,0,0.521574816907738,0.801711364730253,0.414432328326074,0.51215543128185,0.691259661814092,0,1.06498800657509,1.02256085710989,0.423387050190929,0.4582137370881,0,0,0.111855431797792,0,0.243835849964539,1.29485767437579,0.410651227424988,0,0.485710993059139,0,1.98950775161368,1.78380136166353,0.33883824611688,0.329821550236287,0,0.385870790539723,0.655678681511872,0,0.735444965261716,0.707029641304878,2.74831853960923,0.891139200981258,0.4226557275834,1.18948980281472,0.187967835959707,0.837952543656503,0.599646935549574,0,1.41157948686277,0.0802413666891683,1.46067277649303,0,0.143339583151451,0.946629373159108,1.49581278420012,4.79985759374415,0,1.11598505450025,0.924351257262837,0.432626562123789,1.89249637252618,0.546327859818478,1.14028650910293,0.61193297845189,1.06886962106224,0.735159196278759,1.50424523575425,0.682008283964155,0.803892390468535,0.829169439458779,0.413731983447581,0.213233981900981,0.714193294391221,0.0645889098360061,0.124149428591716,0.560659312903067,0.318235791390825,1.0105859447911,0.870866991587845,1.02669990325584,0.0673520530145875,0.286888821570705,0.332660356546013,0.407016343054873,1.17400080465487,0,0.449126010532934,0,0.488965776731466,0.406896178315738,0.665756774185513,0.201273793591026,0 | |||
|short_description=p5@PTPRG | |||
}} |
Revision as of 19:31, 21 January 2014
Short description: | p5@PTPRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PTPRG_5end |
Coexpression cluster: | NA |
Association with transcript: | -37bp_to_ENST00000495879, NM_002841, uc003dla.3, uc003dlb.2, uc003dlc.2_5end |
EntrezGene: | PTPRG |
HGNC: | 9671 |
UniProt: | P23470Q49A02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data