FFCP PHASE1:Hg19::chr3:58092405..58092413,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:58092405..58092413,+ | |||
|id=chr3:58092405..58092413,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.94e-14!254;CL:0000220!1.56e-13!246;CL:0002321!1.86e-13!248 | |||
|ontology_enrichment_celltype_v019=CL:0002231;4.61e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,3.08e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;8.18e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;8.18e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,9.67e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,1.15e-07,47;UBERON:0001008,1.78e-07,48 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.281908808191942,1.0007329835313,0,0.872338524100369,0,0,0,0.737201809504527,4.18680700783456,0.873765488520689,1.05506791291381,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0,1.09499540058307,0.502170558379211,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0.6024118375565,2.9580320813343,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,0.580418477257168,0.56738522469114,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0,0.164437904603676,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.283604451492204,1.99556457716308,0.175669571386252,0.0654895377488563,1.45718115317017,0.741568885568859,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,1.6507082516404,1.04497483268405,0.258416759169329,0.35576626268671,0.33472061276467,0,0.760272105718513,0.976248230192678,0,7.29127753093584,0.17859945656816,0,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.12663051166458,0,0.573673241497627,0.354668382198357,1.12135520028461,2.1349799145941,0.49333509683432,0,0.269421344139376,0,0,0,0.468642863667593,0,0,0,0.587172493218824,0,0.421352420106746,0,0.122834317311768,0,0,0.494533858557114,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0.113432183160021,1.07633781413317,0,0,0.600182192168805,0,1.03056216018252,0.37223371266318,0,0.389748020644795,0,0,0,0.710019185033229,0.10075209822764,0,0.386521706326594,0.272746120590835,0.286804595389004,0.121973706129595,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.404493924480493,0.196221465125346,0.38474715694639,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0,0.439001141634502,1.1240175325762,0.703702806881416,0.648119116109707,0.325808305310325,0,1.44331342025273,0,0,0.288732895522148,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0.626909658919938,0,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0.871533458600294,0.899756920638513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.623912584592421,1.07057393278297,0.157702415033935,0,0,0,0,0,0.368738337083406,0,0,0,0,0.215714200818617,0,0,0,1.20956117331872,0,0,0.561320188866147,0.128139149255701,0.511707249066704,0.160853921143607,1.48418066444991,0.154209693802656,0,0,0,0.464841513839837,0.604297247958111,4.61164881697555,1.84161977871793,0.114814448164607,0.182091168006717,0.131124414959424,0.902399225814824,0.385076685522074,0,2.92278449306521,0.211103257785751,2.27466768141793,0.850468526382578,0,0,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0.0915694648183434,0,0,1.30012049207304,0,0,0.462145851343933,0.307007349452259,0.137836572484531,0.214840489736547,0.435050081742686,0.255679882248303,0,0.826424576804891,0.768760269460425,0,0.2023155617111,0,0.31481234683064,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0.38126038784765,0,0,0,0,0.179872457583315,0.54907405947211,0.235624804691373,0.202182481573316,1.58510321173008,0.842516912477962,0,0,0,0,0.989838023675989,0,0,0,0.438450885253763,0.578775534266688,0,0.405820753925408,0.92947049429925,0.845086807596724,0,0.196498082026242,0.35667105148125,0,0,0.329294892959902,0,0,0,0,2.17781969722645,0.0941438007767792,1.29151611801369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.111443384277478,0,0.47748896947538,0.593929361665277,1.22864280839693,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0.347249989866585,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0.278847488557207,0,0.227884111694002,0,0.179515288819544,0.54323685961004,0.957003479195758,0.183195186803725,1.06606955203727,2.04386596391473,0,0,0,0,0,0,0,0.632994193584081,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0.126373159256976,0,0.103688191397247,0,0.661983911750998,0,0,0,0,0.173559738335131,0,0.0870592065804026,0.34945333648406,0,0.483781656445426,0.219267951258557,0.164230914106418,0,0,0.225980740780532,0,0,0,0.391102765469606,0.0801588202515337,0.213452994739353,0.599428828746391,0,0,0.686379991447858,0.432164393964449,0.124252535565433,0,0,0.104602846312333,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0.157566364614447,0.0824158583811665,0.13480708770837,0.0984274815147488,0.0846733320657845,0,0,0,0.275078873194468,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0.35857467866569,0,0,0,0.25426853765475,0.542999601753713,0.864221491201268,0.979762080328227,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0,0,0.415045904808692,0,0,0,1.6468607378872,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0,0,0.889811221596536,0.228840068396924,0.302461847526478,0.621748802331122,0.147855149989634,0.318593534327405,0,0,0,0,0.521745061811734,0.300515217994437,1.14241563650639,0.813741466409323,0.363697318405119,0.429642228169954,0,1.99047944349308,0.800055529326307,0.343395705182793,0,0,0.192619830407303,0,1.30497145982606,0,0.463044948647668,0.734210113519403,0.179088841081487,0.617602894321944,0.219284049578707,0.353378291891762,0,0,0.76872455576384,0,0,0,0.194860308839388,0,0,0.327609848846413,0.737318726261158,0.211312123358627,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0,0.235939446695481,0.550285795565037,0,0,0,0,0,0,0,0.261906694481422,2.12903492763126,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0.171488009437418,0,0.0657727735628491,0.118193840883968,0.333694205676207,0,0,0,0,0,2.38875843943525,0.0714765441766563,0,0,0,0,0.207216164163037,0.17071847709395,0,0,0.236664001461131,0.0852134047591577,1.27016115057279,0.68732060563215,0,0.955538938977433,0.223710863595585,0,0,0,0,0,0.485710993059139,0,0.397901550322736,0,0,0,0,0.0771741581079447,0.218559560503957,0.940634592723046,0.245148321753905,0,0,0,0.4226557275834,0,0,0.128915775947154,0,0.178553938605658,0,0.320965466756673,0,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0.250707539292375,0,0.535928260312357,0,0,0.639701945702943,0,0.129177819672012,0.0620747142958579,0.112131862580613,0.12729431655633,0.202117188958219,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0.0814032686109745,0.106727345877715,0,0.269475606319761,2.34640942403454,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr3:58092405..58092413,+ | |||
}} |
Revision as of 19:24, 21 January 2014
Short description: | p@chr3:58092405..58092413, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:58092405..58092413, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 3.08e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary system structure | 1.15e-07 | 47 |
renal system | 1.78e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 9.67e-07 | 1 |