FFCP PHASE1:Hg19::chr3:57678772..57678838,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=201627 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26635 | |||
|TSSclassifier=strong | |||
|UniProt=Q8IWF6 | |||
|association_with_transcript=0bp_to_ENST00000311128,NM_152678,uc003dja.2_5end | |||
|coexpression_cluster_id=C612 | |||
|description=CAGE_peak_1_at_FAM116A_5end | |||
|id=chr3:57678772..57678838,- | |||
|ontology_enrichment_celltype=CL:0000738!1.27e-26!140;CL:0000037!1.89e-23!172;CL:0000566!1.89e-23!172;CL:0002087!2.08e-21!119;CL:0002032!7.11e-21!165;CL:0000837!7.11e-21!165;CL:0002031!1.17e-20!124;CL:0000766!3.93e-20!76;CL:0000988!5.51e-19!182;CL:0000557!6.65e-16!71;CL:0000839!2.05e-15!70;CL:0002194!8.32e-15!63;CL:0000576!8.32e-15!63;CL:0000040!8.32e-15!63;CL:0000559!8.32e-15!63;CL:0000763!9.38e-15!112;CL:0000049!9.38e-15!112;CL:0002057!1.56e-14!42;CL:0002009!1.62e-14!65;CL:0000860!1.32e-13!45;CL:0000791!1.35e-10!18;CL:0000789!1.35e-10!18;CL:0002420!1.35e-10!18;CL:0002419!1.35e-10!18;CL:0000790!1.35e-10!18;CL:0000084!8.63e-08!25;CL:0000827!8.63e-08!25;CL:0000625!1.10e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000576;8.02e-11;48!CL:0000791;1.35e-10;18!CL:0000789;1.35e-10;18!CL:0002419;1.35e-10;18!CL:0000766;4.34e-10;69!CL:0000860;2.51e-09;33!CL:0002057;2.51e-09;33!CL:0000473;1.13e-08;39!CL:0000234;1.13e-08;39!CL:0000084;8.69e-08;25!CL:0000625;1.10e-07;11!CL:0002087;4.37e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.75e-27,136;CL:0000037,4.48e-24,168;CL:0002087,3.06e-22,115;CL:0002032,1.84e-21,161;CL:0000837,1.84e-21,161;CL:0002031,1.97e-21,120;CL:0000766,2.35e-21,72;CL:0000988,6.35e-20,177;CL:0000557,6.01e-17,67;CL:0000839,1.93e-16,66;CL:0002194,6.68e-16,59;CL:0000576,6.68e-16,59;CL:0000040,6.68e-16,59;CL:0000559,6.68e-16,59;CL:0002009,1.47e-15,61;CL:0000473,2.08e-15,48;CL:0000234,2.08e-15,48;CL:0000763,2.21e-15,108;CL:0000049,2.21e-15,108;CL:0000860,1.56e-14,42;CL:0002057,1.56e-14,42;CL:0000791,1.35e-10,18;CL:0000789,1.35e-10,18;CL:0002420,1.35e-10,18;CL:0002419,1.35e-10,18;CL:0000790,1.35e-10,18;CL:0000084,8.63e-08,25;CL:0000827,8.63e-08,25;CL:0000625,1.10e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.04e-10;42!CL:0000790;1.35e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.08e-20!115;UBERON:0002390!7.58e-16!102;UBERON:0003061!7.58e-16!102;UBERON:0002193!1.32e-14!112;UBERON:0002371!2.38e-11!80;UBERON:0001474!7.01e-10!86;UBERON:0002405!1.13e-08!115;UBERON:0004765!4.59e-07!101;UBERON:0001434!4.59e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.12e-20,114;UBERON:0002390,1.40e-16,98;UBERON:0003061,1.40e-16,98;UBERON:0002193,3.16e-15,108;UBERON:0002405,3.03e-12,93;UBERON:0002371,5.04e-12,76;UBERON:0001474,1.97e-10,82;UBERON:0004765,2.10e-08,90 | |||
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| |||
|short_description=p1@FAM116A | |||
}} |
Revision as of 19:23, 21 January 2014
Short description: | p1@FAM116A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM116A_5end |
Coexpression cluster: | C612_Neutrophils_Eosinophils_granulocyte_CD14_CD4_acute_CD19 |
Association with transcript: | 0bp_to_ENST00000311128, NM_152678, uc003dja.2_5end |
EntrezGene: | FAM116A |
HGNC: | 26635 |
UniProt: | Q8IWF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.75e-27 | 136 |
hematopoietic stem cell | 4.48e-24 | 168 |
nongranular leukocyte | 3.06e-22 | 115 |
hematopoietic oligopotent progenitor cell | 1.84e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.84e-21 | 161 |
hematopoietic lineage restricted progenitor cell | 1.97e-21 | 120 |
myeloid leukocyte | 2.35e-21 | 72 |
hematopoietic cell | 6.35e-20 | 177 |
granulocyte monocyte progenitor cell | 6.01e-17 | 67 |
myeloid lineage restricted progenitor cell | 1.93e-16 | 66 |
monopoietic cell | 6.68e-16 | 59 |
monocyte | 6.68e-16 | 59 |
monoblast | 6.68e-16 | 59 |
promonocyte | 6.68e-16 | 59 |
macrophage dendritic cell progenitor | 1.47e-15 | 61 |
defensive cell | 2.08e-15 | 48 |
phagocyte | 2.08e-15 | 48 |
myeloid cell | 2.21e-15 | 108 |
common myeloid progenitor | 2.21e-15 | 108 |
classical monocyte | 1.56e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.56e-14 | 42 |
mature alpha-beta T cell | 1.35e-10 | 18 |
alpha-beta T cell | 1.35e-10 | 18 |
immature T cell | 1.35e-10 | 18 |
mature T cell | 1.35e-10 | 18 |
immature alpha-beta T cell | 1.35e-10 | 18 |
T cell | 8.63e-08 | 25 |
pro-T cell | 8.63e-08 | 25 |
CD8-positive, alpha-beta T cell | 1.10e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.12e-20 | 114 |
hematopoietic system | 1.40e-16 | 98 |
blood island | 1.40e-16 | 98 |
hemolymphoid system | 3.16e-15 | 108 |
immune system | 3.03e-12 | 93 |
bone marrow | 5.04e-12 | 76 |
bone element | 1.97e-10 | 82 |
skeletal element | 2.10e-08 | 90 |