FFCP PHASE1:Hg19::chr3:52828805..52828821,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3699 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6168 | |||
|TSSclassifier=weak | |||
|UniProt=E7ET33,Q06033 | |||
|association_with_transcript=0bp_to_ENST00000416872,ENST00000449956_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_ITIH3_5end | |||
|id=chr3:52828805..52828821,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.77e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.79e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.22e-12;7!UBERON:0004161;4.83e-12;11!UBERON:0009497;4.52e-10;13!UBERON:0006965;5.66e-08;2!UBERON:0006603;9.26e-08;65!UBERON:0003104;1.44e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.28e-62!115;UBERON:0001049!3.72e-13!57;UBERON:0005068!3.72e-13!57;UBERON:0006241!3.72e-13!57;UBERON:0007135!3.72e-13!57;UBERON:0005057!4.57e-11!26;UBERON:0001017!5.81e-11!82;UBERON:0005743!6.40e-11!86;UBERON:0003075!2.86e-10!86;UBERON:0007284!2.86e-10!86;UBERON:0000477!2.86e-10!286;UBERON:0004111!5.58e-10!241;UBERON:0002346!1.97e-09!90;UBERON:0002616!2.23e-09!59;UBERON:0002368!4.13e-09!35;UBERON:0000073!4.57e-09!94;UBERON:0001016!4.57e-09!94;UBERON:0000025!5.69e-09!194;UBERON:0002107!6.90e-09!19;UBERON:0006925!6.90e-09!19;UBERON:0008836!6.90e-09!19;UBERON:0000062!1.04e-08!511;UBERON:0000955!1.35e-08!69;UBERON:0006238!1.35e-08!69;UBERON:0003080!1.55e-08!42;UBERON:0002298!2.77e-08!8;UBERON:0009854!2.87e-08!23;UBERON:0000481!3.81e-08!347;UBERON:0002780!8.39e-08!41;UBERON:0001890!8.39e-08!41;UBERON:0006240!8.39e-08!41;UBERON:0009497!2.08e-07!25;UBERON:0000015!2.08e-07!25;UBERON:0002423!2.08e-07!25;UBERON:0006235!2.08e-07!25;UBERON:0004161!2.08e-07!25;UBERON:0008835!2.75e-07!22;UBERON:0003894!2.75e-07!22;UBERON:0002530!4.10e-07!59;UBERON:0001893!5.32e-07!34;UBERON:0009856!5.92e-07!26;UBERON:0002020!6.02e-07!34;UBERON:0003528!6.02e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.44e-12;19!UBERON:0006925;7.44e-12;19!UBERON:0002423;6.94e-11;25!UBERON:0002365;3.99e-08;31!UBERON:0002330;3.99e-08;31!UBERON:0002360;4.82e-08;2!UBERON:0000094;4.82e-08;2!UBERON:0010743;4.82e-08;2!UBERON:0002368;6.19e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.71e-31,114;UBERON:0009854,7.14e-12,23;UBERON:0002107,7.47e-12,19;UBERON:0006925,7.47e-12,19;UBERON:0008836,7.47e-12,19;UBERON:0009497,7.05e-11,25;UBERON:0000015,7.05e-11,25;UBERON:0002423,7.05e-11,25;UBERON:0006235,7.05e-11,25;UBERON:0004161,7.05e-11,25;UBERON:0009856,2.70e-10,26;UBERON:0008835,4.94e-10,22;UBERON:0003894,4.94e-10,22;UBERON:0007499,1.19e-08,25;UBERON:0002365,2.41e-08,31;UBERON:0002330,2.41e-08,31;UBERON:0002360,3.33e-08,2;UBERON:0000094,3.33e-08,2;UBERON:0010743,3.33e-08,2;UBERON:0004921,3.97e-08,118;UBERON:0005172,1.53e-07,54;UBERON:0005173,1.53e-07,54;UBERON:0001007,2.60e-07,145;UBERON:0001555,2.60e-07,145;UBERON:0007026,2.60e-07,145;UBERON:0002368,3.30e-07,35;UBERON:0004119,6.67e-07,160;UBERON:0000925,6.67e-07,160;UBERON:0006595,6.67e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0.37223371266318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2024.27790610464,2221.18950969143,1723.33415778966,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,1.02738161275192,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0.587403472388222,2.05886054286514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,275.016460087771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,287.515167572284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.00683535014765,0,0,0,0,0,0,0,0.422008249231538,0,0,0,3.58646378851925,1.38141957765574,0,0,0,0.311039587661807,0,0,0,1.1837208676432,0,0,11.6319929531426,0.463840490809256,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0.295547618953547,1.75508317723178,0,0,5.54041861227339,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59223616106011,1.22206028986725,0,0,0,0.134802265961354,0,0,0,0,0,1.97292201424695,1.20990716048664,0,5.11811294990753,0,0,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,1.74580229679155,0,0,0,0,0.316553979779393,0,0,3.41524791582964,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0.262887354279314,1.11712960508902,1.14580212005842,0,0.599037001496973,1.28767814440971,1.11585728720936,0.134366944973453,0.360299883542404,0,62.1599308403995,64.7788646875968,64.8422091877259,0.0984274815147488,0,0,0.272406812223151,0,0,0,0.2249738915515,0,0.182248669974074,0,0.86686278029118,0.83927341015997,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,1789.25622097571,775.165300136495,0.129282956361551,0.13223260174269,0,0,1.70859860108311,0.314408610199332,0.414239055347196,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,1.66393577305278,1.36612086471044,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0.449803112163605,0,0,0,1.04349012362347,0,0,0,0,0,0,1.19428766609585,0,0,0,3.78554694685953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0.132864840313363,0.981392365535065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0,0.276629009856872,0.645902582527404,0,0,0,0,0,0,0,0,3.68530608911361,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.253663240775627,0,0,7.93937885422871,0,0,0,0.672567444437648,0,0.227662191351298,1.86274977341542,0,0,0.40781839786099,0.328863867814245,0,0,1.25588948560822,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,1.84793052341245,0,0,0,0,0,0,0,0,0.771741581079447,2.18559560503957,0,0.245148321753905,0,0.392616934229891,0.297046400327086,1.6906229103336,0,8.36456870020697,8.95964642832723,0,0,0,0,0,1.37618785021362,0.860037498908708,0,0.611923411718232,0.436350690340377,0.5290268405154,0,0,0,0,0,0,0,0,0,0,3.03114792872958,0.535928260312357,0,0.413731983447581,1.27940389140589,0.476128862927481,0.322944549180031,0.0620747142958579,0,1.59117895695412,0.808468755832877,0.870866991587845,0.684466602170562,0.875576689189638,2.00822175099494,0,0,0,0,0,11.7320471201727,3.30051899293739,0,1.33151354837103,1.20764276154616,0 | |||
|short_description=p1@ITIH3 | |||
}} |
Revision as of 19:14, 21 January 2014
Short description: | p1@ITIH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ITIH3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000416872, ENST00000449956_5end |
EntrezGene: | ITIH3 |
HGNC: | 6168 |
UniProt: | E7ET33Q06033 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.79e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.71e-31 | 114 |
digestive tract diverticulum | 7.14e-12 | 23 |
liver | 7.47e-12 | 19 |
digestive gland | 7.47e-12 | 19 |
liver bud | 7.47e-12 | 19 |
epithelium of foregut-midgut junction | 7.05e-11 | 25 |
anatomical boundary | 7.05e-11 | 25 |
hepatobiliary system | 7.05e-11 | 25 |
foregut-midgut junction | 7.05e-11 | 25 |
septum transversum | 7.05e-11 | 25 |
sac | 2.70e-10 | 26 |
hepatic diverticulum | 4.94e-10 | 22 |
liver primordium | 4.94e-10 | 22 |
epithelial sac | 1.19e-08 | 25 |
exocrine gland | 2.41e-08 | 31 |
exocrine system | 2.41e-08 | 31 |
meninx | 3.33e-08 | 2 |
membrane organ | 3.33e-08 | 2 |
meningeal cluster | 3.33e-08 | 2 |
subdivision of digestive tract | 3.97e-08 | 118 |
abdomen element | 1.53e-07 | 54 |
abdominal segment element | 1.53e-07 | 54 |
digestive system | 2.60e-07 | 145 |
digestive tract | 2.60e-07 | 145 |
primitive gut | 2.60e-07 | 145 |
endocrine gland | 3.30e-07 | 35 |
endoderm-derived structure | 6.67e-07 | 160 |
endoderm | 6.67e-07 | 160 |
presumptive endoderm | 6.67e-07 | 160 |