FFCP PHASE1:Hg19::chr3:49506374..49506387,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=1605 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2666 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=228bp_to_ENST00000469139,ENST00000515359_5end | |||
|coexpression_cluster_id=C2478 | |||
|description=CAGE_peak_15_at_DAG1_5end | |||
|id=chr3:49506374..49506387,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.02e-15!7;CL:0000586!2.02e-15!7;CL:0002541!1.39e-07!3;CL:0000077!4.87e-07!19;CL:0002150!9.07e-07!3;CL:0000861!9.07e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;9.23e-55;7!CL:0000586;9.23e-55;7!CL:0002541;1.17e-21;3!CL:0002262;7.21e-09;2!CL:1000398;7.21e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,6.62e-55,7;CL:0000586,6.62e-55,7;CL:0002541,1.17e-21,3;CL:0002262,7.49e-09,2;CL:1000398,7.49e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.34e-14;10!UBERON:0005564;1.34e-14;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.03e-14!143;DOID:305!3.65e-13!106;DOID:162!4.97e-10!235;DOID:3095!1.07e-09!22;DOID:2994!1.07e-09!22;DOID:14566!1.51e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.24e-25;22!DOID:2994;7.24e-25;22!DOID:178;1.12e-16;1!DOID:326;1.12e-16;1!DOID:3978;1.12e-16;1!DOID:3394;1.12e-16;1!DOID:5844;1.12e-16;1!DOID:1799;2.08e-16;1!DOID:10165;2.08e-16;1!DOID:1798;2.08e-16;1!DOID:114;5.28e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.09e-25,22;DOID:2994,7.09e-25,22;DOID:178,1.21e-16,1;DOID:326,1.21e-16,1;DOID:3978,1.21e-16,1;DOID:3394,1.21e-16,1;DOID:5844,1.21e-16,1;DOID:1799,1.93e-16,1;DOID:10165,1.93e-16,1;DOID:1798,1.93e-16,1;DOID:114,5.49e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.53e-11!14;UBERON:0000158!5.53e-11!14;UBERON:0000473!4.49e-09!8;UBERON:0000476!1.39e-07!3;UBERON:0000920!1.39e-07!3;UBERON:0000305!2.62e-07!7;UBERON:0001737!3.15e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.17e-21;3!UBERON:0000920;1.17e-21;3!UBERON:0000473;4.42e-18;8!UBERON:0003135;2.50e-13;11!UBERON:0001281;7.21e-09;2!UBERON:0003497;7.21e-09;2!UBERON:0003909;7.21e-09;2!UBERON:0003835;7.21e-09;2!UBERON:0000991;3.01e-07;21!UBERON:0005631;3.77e-07;10!UBERON:0000158;3.77e-07;10!UBERON:0003101;6.10e-07;22!UBERON:0000079;6.10e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.17e-21,3;UBERON:0000473,4.18e-18,8;UBERON:0003135,2.39e-13,11;UBERON:0003124,7.64e-10,7;UBERON:0001281,7.49e-09,2;UBERON:0003497,7.49e-09,2;UBERON:0003909,7.49e-09,2;UBERON:0003835,7.49e-09,2;UBERON:0000991,2.95e-07,21;UBERON:0009196,2.95e-07,21;UBERON:0009117,2.95e-07,21;UBERON:0005564,2.95e-07,21;UBERON:0004176,5.98e-07,22;UBERON:0003101,5.98e-07,22;UBERON:0000079,5.98e-07,22 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0.218441372130172,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.365921118388786,0.397589304964456,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.441175890929576,0.217879444092406,0,0.539325232640658,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0.614942192715568,0,0,0,0,0.185176890317059,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0,0,0,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.178064071293475,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.71623345421307,0.593929361665277,0,0,0,0,0,0,0,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.153900517007594,0,0.69169171316418,1.97466817701499,5.54101596802241,3.82801391678303,0.457987967009312,6.92945208824225,0,0,0,0,0,0,0,0,0,0.489698424477443,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0.290268993867255,0.365446585430928,0.328461828212837,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,2.79550600698588,0,0,0,0,0,0.630265458457789,0.906574442192831,0.337017719270924,0,0,0,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,1.77987976358325,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.428883182749851,0,0.226705925512272,0.694567422971502,0,0,0.617602894321944,0.877136198314828,0,0.192914038270915,0.168942440653073,0,1.38172136692479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0.198916222116275,0,0,0,1.57144016688853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,0,0,0.472775363535873,0,0.078493092850514,0,0.840816489941367,0,0,0,0.0714765441766563,0,0.23248285073625,0.347716544605159,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378499274505237,0.327796715891087,1.14028650910293,5.91535212503494,2.93939145792117,7.71917156092697,0.250707539292375,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p15@DAG1 | |||
}} |
Revision as of 18:55, 21 January 2014
Short description: | p15@DAG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_15_at_DAG1_5end |
Coexpression cluster: | C2478_testicular_chorionic_placenta_anaplastic_amniotic_choriocarcinoma_Placental |
Association with transcript: | 228bp_to_ENST00000469139, ENST00000515359_5end |
EntrezGene: | DAG1 |
HGNC: | 2666 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 6.62e-55 | 7 |
germ cell | 6.62e-55 | 7 |
chorionic membrane mesenchymal stem cell | 1.17e-21 | 3 |
endothelial cell of sinusoid | 7.49e-09 | 2 |
endothelial cell of hepatic sinusoid | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.17e-21 | 3 |
testis | 4.18e-18 | 8 |
male reproductive organ | 2.39e-13 | 11 |
chorion | 7.64e-10 | 7 |
hepatic sinusoid | 7.49e-09 | 2 |
abdomen blood vessel | 7.49e-09 | 2 |
sinusoid | 7.49e-09 | 2 |
abdominal segment blood vessel | 7.49e-09 | 2 |
gonad | 2.95e-07 | 21 |
indifferent external genitalia | 2.95e-07 | 21 |
indifferent gonad | 2.95e-07 | 21 |
gonad primordium | 2.95e-07 | 21 |
external genitalia | 5.98e-07 | 22 |
male organism | 5.98e-07 | 22 |
male reproductive system | 5.98e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.09e-25 | 22 |
germ cell cancer | 7.09e-25 | 22 |
vascular disease | 1.21e-16 | 1 |
ischemia | 1.21e-16 | 1 |
extrinsic cardiomyopathy | 1.21e-16 | 1 |
myocardial ischemia | 1.21e-16 | 1 |
myocardial infarction | 1.21e-16 | 1 |
islet cell tumor | 1.93e-16 | 1 |
endocrine pancreas cancer | 1.93e-16 | 1 |
pancreatic endocrine carcinoma | 1.93e-16 | 1 |
heart disease | 5.49e-09 | 2 |