FFCP PHASE1:Hg19::chr3:33759699..33759754,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23122 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17078 | |||
|TSSclassifier=strong | |||
|UniProt=B2RTR1,O75122 | |||
|association_with_transcript=0bp_to_NM_015097_5end | |||
|description=CAGE_peak_1_at_CLASP2_5end | |||
|id=chr3:33759699..33759754,- | |||
|ontology_enrichment_celltype=CL:0000037!5.38e-47!172;CL:0000566!5.38e-47!172;CL:0002032!6.05e-44!165;CL:0000837!6.05e-44!165;CL:0000988!9.73e-42!182;CL:0000738!5.55e-37!140;CL:0002087!1.50e-36!119;CL:0002031!7.35e-35!124;CL:0000763!2.42e-31!112;CL:0000049!2.42e-31!112;CL:0002009!2.61e-25!65;CL:0000557!2.98e-25!71;CL:0002194!3.23e-24!63;CL:0000576!3.23e-24!63;CL:0000040!3.23e-24!63;CL:0000559!3.23e-24!63;CL:0000839!5.84e-23!70;CL:0000766!3.53e-20!76;CL:0000860!4.38e-18!45;CL:0002057!1.50e-17!42;CL:0000542!4.00e-11!53;CL:0000051!4.00e-11!53;CL:0000838!7.10e-11!52;CL:0000451!8.22e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.14e-15;33!CL:0002057;1.14e-15;33!CL:0000473;3.19e-14;39!CL:0000234;3.19e-14;39!CL:0000576;3.09e-13;48!CL:0002087;3.35e-10;104!CL:0000766;5.79e-09;69!CL:0000763;8.92e-09;100!CL:0000738;1.12e-08;136!CL:0000542;2.42e-07;53!CL:0000988;2.71e-07;177!CL:0000451;8.36e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.67e-46,168;CL:0002032,1.02e-42,161;CL:0000837,1.02e-42,161;CL:0000988,2.57e-41,177;CL:0000738,7.84e-36,136;CL:0002087,1.92e-35,115;CL:0002031,9.58e-34,120;CL:0000763,2.89e-30,108;CL:0000049,2.89e-30,108;CL:0002009,2.21e-24,61;CL:0000557,2.73e-24,67;CL:0002194,2.72e-23,59;CL:0000576,2.72e-23,59;CL:0000040,2.72e-23,59;CL:0000559,2.72e-23,59;CL:0000839,5.42e-22,66;CL:0000766,3.39e-19,72;CL:0000473,1.47e-18,48;CL:0000234,1.47e-18,48;CL:0000860,1.50e-17,42;CL:0002057,1.50e-17,42;CL:0000542,4.00e-11,53;CL:0000051,4.00e-11,53;CL:0000838,7.10e-11,52;CL:0000451,8.22e-07,10 | |||
|ontology_enrichment_development_v019=CL:0002057;4.43e-13;42!CL:0000049;1.90e-08;108!CL:0000051;2.42e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!3.54e-12!51;DOID:0060083!3.54e-12!51;DOID:1240!1.90e-11!39;DOID:8692!1.81e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.75e-10;31!DOID:1240;2.44e-09;39!DOID:2531;1.73e-07;51!DOID:0060083;1.73e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,3.54e-12,51;DOID:0060083,3.54e-12,51;DOID:1240,1.90e-11,39;DOID:8692,1.81e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.69e-22!102;UBERON:0003061!1.69e-22!102;UBERON:0002193!4.64e-20!112;UBERON:0002371!5.39e-20!80;UBERON:0001474!4.68e-19!86;UBERON:0004765!4.23e-14!101;UBERON:0001434!4.23e-14!101;UBERON:0002405!8.16e-14!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.79e-21,98;UBERON:0003061,1.79e-21,98;UBERON:0002193,4.65e-19,108;UBERON:0002371,5.26e-19,76;UBERON:0001474,4.55e-18,82;UBERON:0002405,1.29e-17,93;UBERON:0004765,3.40e-14,90;UBERON:0001434,1.37e-11,100 | |||
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| |||
|short_description=p1@CLASP2 | |||
}} |
Revision as of 18:07, 21 January 2014
Short description: | p1@CLASP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLASP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_015097_5end |
EntrezGene: | CLASP2 |
HGNC: | 17078 |
UniProt: | B2RTR1O75122 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 9.67e-46 | 168 |
hematopoietic oligopotent progenitor cell | 1.02e-42 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-42 | 161 |
hematopoietic cell | 2.57e-41 | 177 |
leukocyte | 7.84e-36 | 136 |
nongranular leukocyte | 1.92e-35 | 115 |
hematopoietic lineage restricted progenitor cell | 9.58e-34 | 120 |
myeloid cell | 2.89e-30 | 108 |
common myeloid progenitor | 2.89e-30 | 108 |
macrophage dendritic cell progenitor | 2.21e-24 | 61 |
granulocyte monocyte progenitor cell | 2.73e-24 | 67 |
monopoietic cell | 2.72e-23 | 59 |
monocyte | 2.72e-23 | 59 |
monoblast | 2.72e-23 | 59 |
promonocyte | 2.72e-23 | 59 |
myeloid lineage restricted progenitor cell | 5.42e-22 | 66 |
myeloid leukocyte | 3.39e-19 | 72 |
defensive cell | 1.47e-18 | 48 |
phagocyte | 1.47e-18 | 48 |
classical monocyte | 1.50e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.50e-17 | 42 |
lymphocyte | 4.00e-11 | 53 |
common lymphoid progenitor | 4.00e-11 | 53 |
lymphoid lineage restricted progenitor cell | 7.10e-11 | 52 |
dendritic cell | 8.22e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.79e-21 | 98 |
blood island | 1.79e-21 | 98 |
hemolymphoid system | 4.65e-19 | 108 |
bone marrow | 5.26e-19 | 76 |
bone element | 4.55e-18 | 82 |
immune system | 1.29e-17 | 93 |
skeletal element | 3.40e-14 | 90 |
skeletal system | 1.37e-11 | 100 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.54e-12 | 51 |
immune system cancer | 3.54e-12 | 51 |
leukemia | 1.90e-11 | 39 |
myeloid leukemia | 1.81e-10 | 31 |