FFCP PHASE1:Hg19::chr3:33759668..33759688,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23122 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17078 | |||
|TSSclassifier=strong | |||
|UniProt=B2RTR1,O75122 | |||
|association_with_transcript=16bp_to_NM_015097_5end | |||
|description=CAGE_peak_6_at_CLASP2_5end | |||
|id=chr3:33759668..33759688,- | |||
|ontology_enrichment_celltype=CL:0000037!7.34e-21!172;CL:0000566!7.34e-21!172;CL:0002032!2.06e-19!165;CL:0000837!2.06e-19!165;CL:0000988!3.37e-19!182;CL:0000738!8.04e-19!140;CL:0002031!3.98e-16!124;CL:0002087!6.52e-16!119;CL:0000763!4.40e-12!112;CL:0000049!4.40e-12!112;CL:0000557!1.74e-10!71;CL:0000766!3.79e-10!76;CL:0002057!7.02e-10!42;CL:0002009!1.93e-09!65;CL:0000860!7.92e-09!45;CL:0002194!1.35e-08!63;CL:0000576!1.35e-08!63;CL:0000040!1.35e-08!63;CL:0000559!1.35e-08!63;CL:0000839!1.48e-08!70;CL:0000542!1.68e-07!53;CL:0000051!1.68e-07!53;CL:0000838!1.98e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.90e-10;33!CL:0002057;7.90e-10;33!CL:0000576;7.95e-08;48!CL:0002087;5.54e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.97e-24,168;CL:0000988,1.16e-22,177;CL:0002032,3.12e-22,161;CL:0000837,3.12e-22,161;CL:0000738,1.88e-21,136;CL:0002031,2.89e-18,120;CL:0002087,1.82e-17,115;CL:0000763,5.32e-15,108;CL:0000049,5.32e-15,108;CL:0000557,9.34e-13,67;CL:0000766,1.13e-12,72;CL:0002009,1.86e-11,61;CL:0000860,6.05e-11,42;CL:0002057,6.05e-11,42;CL:0002194,2.77e-10,59;CL:0000576,2.77e-10,59;CL:0000040,2.77e-10,59;CL:0000559,2.77e-10,59;CL:0000839,3.29e-10,66;CL:0000473,3.98e-09,48;CL:0000234,3.98e-09,48;CL:0000838,1.50e-07,52;CL:0000542,3.13e-07,53;CL:0000051,3.13e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;2.24e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.40e-10!112;UBERON:0002390!4.13e-10!102;UBERON:0003061!4.13e-10!102;UBERON:0002371!1.96e-08!80;UBERON:0001474!4.27e-08!86;UBERON:0002405!5.41e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.06e-12,108;UBERON:0002390,6.08e-12,98;UBERON:0003061,6.08e-12,98;UBERON:0002405,3.01e-11,93;UBERON:0002371,3.52e-10,76;UBERON:0001474,2.14e-09,82;UBERON:0004765,2.30e-07,90 | |||
|phase1_expression=3.08853244759946,2.14100523890983,2.39622486963151,1.0007329835313,1.34088328328186,2.61701557230111,0,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0,0.123766352960047,0.994192127183747,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.958120975510189,0.753255837568817,0.687720651731561,0.738905305049512,0.314843125254717,1.57345710739562,3.0706351847777,1.39334510984468,0,0.6024118375565,0,3.17615522379237,1.42169232487422,0.587200878669695,3.87796785972314,2.00544447470142,5.20826089718044,1.11957737119962,0,1.03030227053675,1.16318591023652,1.88937971844405,0.727752183563449,0.929716147622738,2.87817521615278,1.23882548358041,1.1507695692886,1.2808035326455,1.89185783910868,1.72372840368309,1.29096936716765,1.35426486594342,1.88242339542605,3.547779950752,2.02251136000576,2.44867113896722,7.38136762275015,2.55734850319616,0,0,0.426224750532694,4.06292934080018,3.40431134814684,11.2108004819203,1.25624332628372,2.08593167368081,1.08594422352558,3.63239701580021,6.2607198117886,6.96217252369946,0.633765858935825,0.637812899895131,0.628975936525128,1.79725809834392,0.450530678524519,0.964353520182481,1.14005097496499,0.99458338599545,1.0959849225878,1.75996244461323,2.18455444504853,0.889509253863555,2.56038133539904,2.00197993518006,3.4485146397269,0.661044872784862,1.90810750907073,2.27685187643779,1.76171156811282,3.05818582500183,1.32171328579026,4.48406850385229,1.58030450865046,3.93419540227666,1.96505381374582,3.90642848099067,0.83593247695339,2.28145586643513,1.4203434172042,3.89653456815823,0.779873198196215,2.06224135232386,0.886135578334485,1.08321545506006,0.640456598628376,1.1705341280389,0.164437904603676,0.829050053357545,0,2.81744470007915,2.67540828089713,2.09071047609954,0.339928028092699,2.68254345521345,3.09264700934367,0.506039384039006,0.637130828648193,2.60433381542567,1.90090408889675,0.451725357233318,0.383959833463255,0,0.473554504088034,0,5.44338206706778,4.27904313253612,3.62061009706997,0,0,0.511450247374121,0.361439152384566,0,0.144846518960824,0,0,0.567208902984407,0.221729397462564,0.702678285545008,1.5062593682237,0.364295288292542,0.370784442784429,1.9472843619281,1.21890816109487,1.32957960518865,3.33886874027479,1.14398982156026,2.22874500797739,0.596287222100115,0,0.347140501607594,0.56530794192401,0,0.275118041940067,0.417989933073621,2.06733407335463,1.77883131343355,1.33888245105868,0.402829317109147,0.760272105718513,0.488124115096339,0.367663080345869,0,0.357198913136319,1.34717623575702,1.46394924628319,1.53316637465883,0,1.83201743930407,1.31780417436063,0,0,0.496971951695318,0.633152558322899,0.926864265692532,0.286836620748814,0.709336764396714,0,0,0.24666754841716,1.24484414159907,0.67355336034844,1.14423332179421,0,1.72852777344,0.70296429550139,0.936480230490962,0,0.149448680551801,0.469737994575059,0.323745888736263,0.280901613404497,0.61246251376468,0.61417158655884,0.619954687054593,0,0.494533858557114,0,0.718618141816238,0.505008341862199,1.37630371859161,0.554128230968366,0.438977620880838,0,1.05166641234618,1.47461838108027,0.717558542755448,0.427114777637135,0.423863802319124,0,0.206105058476878,0.772921620136887,0.558350568994769,1.0126579934476,0.876933046450788,0,0.368199594569197,0.323292113637624,0.710019185033229,0.302256294682921,0.339121184620975,1.73934767846967,1.36373060295417,1.72082757233402,1.58565817968474,0.795178609928912,1.16193942869518,2.17688215532278,2.01856680700503,3.6497735907583,1.56449532329816,1.28648187638577,0,0,0,0.473227200159376,0.337169380156203,0.241011029883482,0.110293972732394,0,0,0.404493924480493,0.196221465125346,0.38474715694639,0.738155454624648,0,0.4115740113314,0,0,0,2.36315962672562,1.7658523976586,0.860919069801795,0.343135620597051,0.658501712451753,0,0.502644862058154,0.462942225792648,0.325808305310325,0,1.44331342025273,0.579652024875384,1.05667824812239,0.288732895522148,0,0.761016608938393,1.58040879591855,0,0.984868024349589,0.702012795417713,1.78357394746474,0.93733833986777,0.671928512795438,0.141775097242386,0.716468181622786,0.581267877027924,1.53353071666084,11.8239177095026,1.93706554829097,0.207328115540772,0.720599767084807,1.38866676769018,0.507983154337352,0.381988425558278,2.34434894420094,0,0.616964956219941,0.300343057843917,0.285826432630578,0.112131084345361,0,0.80672114403045,0.904902010304444,0,1.690605505112,0.797814349754612,1.04007436911366,0.257207374262142,1.41849132023278,0.799266537048298,0.428933980974443,0,0.823240336780769,0.65147236858747,0,0,0.904318131178758,0,0.599837947092342,0,0,0,0.479249710983165,0,0,0.289562613335158,1.2328579353023,0.537182889719687,0.672510863961164,2.75843064282698,3.88129634747131,3.08023287071396,0,0,0,0.670065061337395,0,1.49801404789436,2.99161459204025,0.414415513436035,0.12269149171914,0.500170521059677,0.271265023699736,0.623912584592421,0.892144943985809,0.630809660135739,0.585707074963566,0.300946099727719,0,1.03473071292505,0,0.737476674166813,0.347534457872331,0,0,0.413536052245775,2.5885704098234,2.98837161849644,0.303127571446259,1.66435439510497,0.604780586659361,1.48864684691266,3.22270143904931,0.841980283299221,2.43464383585832,2.55853624533352,1.93024705372329,1.48418066444991,0.462629081407967,0,0.328508624055237,0.519254429183621,0.116210378459959,1.20859449591622,1.20303882181971,0.368323955743585,0.459257792658427,0.364182336013434,0.524497659837696,0.451199612907412,0.616122696835318,0,0,0.633309773357254,0,0.510281115829547,1.29549549661284,1.54227252690289,0.270946437543853,0.501689773854853,0,0,0.895499018888713,0.657779629937804,0,0,0,0.325378394664303,1.03041011647722,0.54941678891006,1.15513299888823,0,0.650060246036521,0,0.096670718292122,0,0.307007349452259,0.689182862422653,0.322260734604821,0.580066775656914,1.10794615640931,0.445160178233687,0.826424576804891,0.576570202095319,2.29702882490251,0.910420027699949,0,0,0.6970372701606,0.616067160352178,1.06461206063404,0.869932992075073,0.37064843820784,1.00187420719394,0.744316738719335,0.949138274156178,1.33441135746677,0.511795582622668,0,0.318203247925937,0,0.359744915166629,1.09814811894422,0.589062011728432,0.404364963146632,1.58510321173008,0,0.48763373908959,0.731140468893853,0,0.682499557039929,0.707027159768564,0,0.551365343546124,0,0.438450885253763,0,1.31178950409327,0.405820753925408,0.6196469961995,0.281695602532241,0.573645408816206,0.294747123039363,1.426684205925,0.709522128141196,0.422215270595328,0.329294892959902,0,0,0.384888450902048,1.34060455107157,0,1.03558180854457,0,0,0,0.229723400206959,1.01489521846434,0.764637207142375,0.569647187174163,0,0,0,1.08006287447623,1.58625035258854,1.49553699578462,0,0.735120647943095,0.929015875628594,1.15415370381156,1.42283686696828,1.4348364545594,1.59663497146253,0.957526850661834,0,0.649243880549111,0.280797178113459,2.05411211129873,0.313359791546046,5.01268954180134,1.18504244461122,3.85411380248879,11.9061827242718,8.0910785161162,0,2.15068535015921,0.223676107892416,1.33479313369527,0.19538809540204,0.835218521685727,0,1.35227839237992,1.6653598399891,1.4098700508785,0.561421621224659,0.439524537815682,0.242721043499027,0.891547074219827,0.284136146806413,0.23874448473769,0.296964680832639,0.307160702099232,0.994147647766298,0.281338832821026,0.556543525114529,1.6480387422676,3.3780065300479,2.39097585901284,1.10513566212459,1.25966373927138,1.63629892003448,0.246169610922139,0.311039587661807,0.718946809178615,0.179021174675609,1.02314474045374,0.690503839458535,2.3948309234694,0,0,0.649376687132959,0,1.82299432759663,0.61221999997337,0,0.341380344856499,0.508507300585533,0.236387681767936,0,1.16641845353302,0.694499979733169,0.885741385813839,0.60298219312704,0,1.21637185924347,0.591095237907095,0.658156191461918,0.21787692703798,0.697118721393016,2.46240827212151,0.341826167541004,0.69169171316418,0.359030577639089,1.3037684630641,0,0.183195186803725,1.06606955203727,0,0.941881538370149,0.831058409500782,0.225595660617181,1.37243774022418,1.34257269580674,1.89753732724185,1.74830236878417,0.421996129056054,0.163232808159148,1.27217764290547,0.865554558968364,2.98578579323551,0.530745387020035,1.83309043480088,3.85477467284809,0.86494757262552,1.77517314159274,1.07841812769083,0,0.234264445725339,0.91227394607833,0.19566461893209,1.69946265673865,0,0,0.30607276163049,1.39010475182674,3.75808548536231,0.518440956986236,0,0.330991955875499,1.2557316736289,0,0.284609546029793,0.554698692052555,0.347119476670262,0.685946781900644,1.21882889212564,0.34945333648406,0.343972064943233,0.290268993867255,0.365446585430928,0.656923656425674,0.678923115418936,0.706049013532002,2.03382666702479,0.137041924646751,0.794858446811959,0.379864775735272,0.586654148204409,1.28254112402454,0.85381197895741,0.799238438328521,0.576361668616424,0.458146384663663,1.88754497648161,0.576219191952599,0.248505071130865,0.235694034616795,0.67952103036807,0.209205692624666,0.407992870545287,1.44475294950759,0,0.821432273351958,5.10986352267889,0.859530882839914,1.57732412567589,0.837847203816763,1.3749625440701,2.15361907373044,1.59743200399193,1.28767814440971,1.33902874465124,2.88888931692923,2.16179930125442,1.16495949527454,2.44227865152393,1.89556474276683,1.3480708770837,0.492137407573744,0.846733320657845,0.795229689809303,0.544813624446302,0.964518890790115,1.2378549293751,0.83088067605837,2.4747128070665,5.41661368190565,0.182248669974074,0.335434687599266,0.551639951094387,2.15063811353492,1.37280437475228,0.179287339332845,1.15149118391667,0.714695326373367,1.32418394073086,0.76280561296425,0,0,0,3.59190574687462,1.64185041498678,0.340776043570843,0.79318464064088,0.439656701034247,1.32506888912221,0.129282956361551,0.39669780522807,0.684347351537318,0.704815022316672,0.854299300541557,0.78602152549833,3.31391244277756,2.97699613087171,0.988058159489721,0.974340787047167,0.638341257770182,0,0.5013797880454,0.306345576763462,0.327872630709804,0.471162288750703,0,0.366078794705889,0.500763722825999,1.14681839138014,0.998361463831671,0.931446044120752,1.24513771442608,1.12482367165896,1.21319294033318,0.285465333544967,0.235265819698172,0,0.724605143054126,0,0.233713309847224,0,0.568209015825267,0.50313580350515,0,0.228840068396924,0.453692771289717,0.621748802331122,0.443565449968902,0.796483835818512,1.34940933649081,0.310525913752519,0.829412415681711,0,0,0.901545653983311,0.380805212168795,0.406870733204662,0.909243296012797,0.214821114084977,0,0.796191777397232,0.400027764663154,0,0,0,0.385239660814607,1.50109113962448,0.260994291965212,0.453411851024545,1.15761237161917,0.734210113519403,0.537266523244462,0.308801447160972,0,0.706756583783524,0.38582807654183,0.168942440653073,0.76872455576384,0.345430341731199,0,0.553033744606923,0.389720617678777,0.664324201566815,0.327130788511688,0.327609848846413,2.21195617878347,1.05656061679314,0.39997479170986,1.06691729694141,0.172214979660816,1.13503190713367,0.184105950251841,0.559518030877778,0,1.02315497042921,1.29389773676018,0.629063767423586,0.655257829152084,0.678930119816101,5.31437300254207,1.11542187833102,0.558644917973244,0.318004350653419,0.552032215008773,0,0,0.3062454773532,0.578063025868136,0,0.638535436228605,0,0.504143392443436,0.276629009856872,0,0,0.687034029507179,0.589848616738702,0.183428598521679,0.808679663052368,0.762764190934334,0.690359926060101,1.19349733269765,2.40673050717623,0.60511520611056,0,1.57144016688853,0,0.591424344868181,0.202612753855184,0,0.206686796501184,0.253663240775627,2.18789923607288,0,0,2.11045493231545,0,1.07140367175657,1.00885116665647,0,1.82129753081038,0.443511850813194,0.230467975111559,0.685952037749674,0.747667062745149,0.328863867814245,0.118193840883968,1.22354542081276,0.863424021355654,0.471346769748006,0.560544326627578,0.913158720509496,0,0,2.287249413653,2.84424501118908,0.697448552208751,0.347716544605159,1.60342272946051,1.45051314914126,0.51215543128185,2.07377898544228,0.430227358820278,0.473328002922261,0.511280428554946,0.423387050190929,1.8328549483524,0,0,0.447421727191169,0.196300467230486,0,0.647428837187895,0.410651227424988,0,0.485710993059139,1.16969731731053,1.59160620129095,5.82708444810086,0.45178432815584,0.329821550236287,0.603851374266694,0.463044948647668,1.5299169235277,1.41095188908457,1.22574160876953,0.942706188406504,0,0.594092800654172,0.8453114551668,1.0195626881269,0.939839179798536,1.48253142339228,0.399764623699716,0.357107877211315,2.11736923029415,0.962896400270019,0,0.458729283404541,0.860037498908708,0.473314686579554,0.475940431336403,0,2.1161073620616,0.743990036333503,0,0.432626562123789,1.00933139868063,0.764859003745869,2.02717601618299,0.917899467677836,0.801652215796681,0.551369397209069,0.250707539292375,1.21245917149183,1.07185652062471,0.829169439458779,0.724030971033267,0.213233981900981,0.714193294391221,2.0668451147522,2.73128742901775,1.23345048838675,0.763765899337979,2.42540626749863,0.435433495793923,0.342233301085281,1.0776328482334,0.717222053926764,1.66330178273007,1.46525883499754,0.747091421144008,0,0.538951212639521,4.69281884806909,0.977931553462932,2.03448089157869,1.33151354837103,1.81146414231924,0.641136984606466 | |||
|short_description=p6@CLASP2 | |||
}} |
Revision as of 18:07, 21 January 2014
Short description: | p6@CLASP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CLASP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_NM_015097_5end |
EntrezGene: | CLASP2 |
HGNC: | 17078 |
UniProt: | B2RTR1O75122 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.97e-24 | 168 |
hematopoietic cell | 1.16e-22 | 177 |
hematopoietic oligopotent progenitor cell | 3.12e-22 | 161 |
hematopoietic multipotent progenitor cell | 3.12e-22 | 161 |
leukocyte | 1.88e-21 | 136 |
hematopoietic lineage restricted progenitor cell | 2.89e-18 | 120 |
nongranular leukocyte | 1.82e-17 | 115 |
myeloid cell | 5.32e-15 | 108 |
common myeloid progenitor | 5.32e-15 | 108 |
granulocyte monocyte progenitor cell | 9.34e-13 | 67 |
myeloid leukocyte | 1.13e-12 | 72 |
macrophage dendritic cell progenitor | 1.86e-11 | 61 |
classical monocyte | 6.05e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.05e-11 | 42 |
monopoietic cell | 2.77e-10 | 59 |
monocyte | 2.77e-10 | 59 |
monoblast | 2.77e-10 | 59 |
promonocyte | 2.77e-10 | 59 |
myeloid lineage restricted progenitor cell | 3.29e-10 | 66 |
defensive cell | 3.98e-09 | 48 |
phagocyte | 3.98e-09 | 48 |
lymphoid lineage restricted progenitor cell | 1.50e-07 | 52 |
lymphocyte | 3.13e-07 | 53 |
common lymphoid progenitor | 3.13e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.06e-12 | 108 |
hematopoietic system | 6.08e-12 | 98 |
blood island | 6.08e-12 | 98 |
immune system | 3.01e-11 | 93 |
bone marrow | 3.52e-10 | 76 |
bone element | 2.14e-09 | 82 |
skeletal element | 2.30e-07 | 90 |