FFCP PHASE1:Hg19::chr3:16475405..16475419,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:16475405..16475419,- | |||
|id=chr3:16475405..16475419,- | |||
|ontology_enrichment_celltype=CL:0000723!9.78e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000136;9.50e-13;13!CL:0002615;7.44e-10;3!CL:0002616;2.88e-08;1!CL:0000511;9.07e-08;1!CL:0002625;9.07e-08;1!CL:0000785;9.07e-08;1!CL:0000216;9.07e-08;1!CL:0000819;9.07e-08;1!CL:0002379;9.07e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.15e-11,15;CL:0002615,5.02e-10,3;CL:0002616,2.89e-08,1;CL:0002379,5.70e-08,1;CL:0000511,6.10e-08,1;CL:0002625,6.10e-08,1;CL:0000216,6.10e-08,1;CL:0000819,7.45e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.07e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;9.07e-08;1!DOID:0060073;9.07e-08;1!DOID:8675;9.07e-08;1!DOID:3565;9.07e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,5.70e-08,1;DOID:3565,5.70e-08,1;DOID:0060073,7.45e-08,1;DOID:8675,7.45e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;9.07e-08;1!UBERON:0000941;9.07e-08;1!UBERON:0001343;9.07e-08;1!UBERON:0001785;9.07e-08;1!UBERON:0002464;9.07e-08;1!UBERON:0004904;9.07e-08;1!UBERON:0001021;9.07e-08;1!UBERON:0004910;9.07e-08;1!UBERON:0004813;9.07e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,6.10e-08,1;UBERON:0001343,6.10e-08,1;UBERON:0004910,6.10e-08,1;UBERON:0005154,6.10e-08,1;UBERON:0005295,6.10e-08,1;UBERON:0004813,6.10e-08,1;UBERON:0005297,6.10e-08,1;UBERON:0005294,6.10e-08,1;UBERON:0010141,6.10e-08,1;UBERON:0005891,6.10e-08,1;UBERON:0000941,7.97e-08,1;UBERON:0001785,7.97e-08,1;UBERON:0002464,7.97e-08,1;UBERON:0004904,7.97e-08,1;UBERON:0001021,7.97e-08,1;UBERON:0003902,7.97e-08,1;UBERON:0005425,7.97e-08,1 | |||
|phase1_expression=0.908391896352783,4.49611100171065,0.281908808191942,4.00293193412522,1.78784437770915,4.36169262050184,0,0,0.261185628199839,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0.662794751455832,0,0,0.730310090387373,0.487932798790507,0,0.204000691244253,0,0,0.136874425072884,0.251085279189606,1.22261449196722,0.821005894499457,1.02324015707783,0,0,0,0,0,0.369754010166788,0.852139206383318,0.142169232487422,0,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0.290796477559129,0,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0,0,0,0,0.632924774881769,1.05627643155971,0.637812899895131,0,0.336985893439485,0,0,0.285012743741249,0.39783335439818,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,1.17903228824749,0,0,0.651844533267181,0,0,0.111410456885174,0.294605907474837,0.443067789167242,0.541607727530031,0,0.130059347559878,0.493313713811028,0,0,0.444859689486181,0.267540828089713,1.04535523804977,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.579297615531196,0,0,0,0.361439152384566,0.50133791063589,0.434539556882471,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.398873881556595,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0,0,0,0.825354125820202,0.417989933073621,0.516833518338658,0,0,0,0.760272105718513,0,0,0,0.17859945656816,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0.573673241497627,0.354668382198357,0.560677600142307,1.06748995729705,0,0,0,0,0.151357427644931,0.576175924479999,0.234321431833797,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0.206651562351531,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0.358779271377724,0.85422955527427,0,0,0.103052529238439,0.515281080091258,0.558350568994769,0.168776332241266,0.487185025805993,0.252433774244115,0.368199594569197,0.323292113637624,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.118306800039844,0,0,0,0,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.402115889646523,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0,0.088048434013226,0,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0.542621605391443,0,0.65147236858747,0,0,0,0,0.399891964728228,0,1.00451418286425,2.10833939483032,0,1.14861935834114,0,0.144781306667579,0.61642896765115,0.179060963239896,0.112085143993527,0,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0.713715955188647,0.157702415033935,0.234282829985426,0.601892199455438,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0.248107807818777,0.767309866440312,1.68396056659844,0.128139149255701,0.511707249066704,0.482561763430822,0,0.308419387605311,0.355123450626254,0.328508624055237,1.03850885836724,0.464841513839837,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0.728364672026868,1.57349297951309,0,0.0770153371044148,0,0,0,1.13733384070897,0.340187410553031,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0.650060246036521,1.6068392984416,0.096670718292122,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0,0.0852266274161009,0,0.495854746082934,0.192190067365106,0,0.10115778085555,0.929691098594572,0.62962469366128,0,0,0,0,0.55597265731176,0.286249773483982,0.372158369359667,0.316379424718726,0.190630193923825,0.511795582622668,0.42793898803392,0.636406495851874,0,0.539617372749944,0.54907405947211,0.117812402345686,0.202182481573316,0,0.421258456238981,0,0.487426979262569,2.11300293513511,0.272999822815972,0.565621727814851,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0.633322905892992,0.658589785919804,0,0.349934720244983,0,0,1.08890984861323,0.0941438007767792,0.43050537267123,1.68471475667626,0.886860307073351,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0,0,0,0,0,0.371606350251437,0,0.142283686696828,0,0.59873811429845,0,0,0,0,0,0,0,0,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0.270455678475983,0,0,0,0.73254089635947,0,0.111443384277478,0,0,0,0,0,0,0.556543525114529,0.659215496907038,0,0.19924798825107,0.552567831062295,0,0,0.492339221844278,0.311039587661807,0.0898683511473268,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.0769502585037971,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,0,0,0,0.0884575645033392,0,0,0.494255755786011,0.3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| |||
|short_description=p@chr3:16475405..16475419,- | |||
}} |
Revision as of 17:42, 21 January 2014
Short description: | p@chr3:16475405..16475419, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:16475405..16475419, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.15e-11 | 15 |
adipocyte of omentum tissue | 5.02e-10 | 3 |
perirenal adipocyte cell | 2.89e-08 | 1 |
meningothelial cell | 5.70e-08 | 1 |
androgen binding protein secreting cell | 6.10e-08 | 1 |
seminiferous tubule epithelial cell | 6.10e-08 | 1 |
Sertoli cell | 6.10e-08 | 1 |
B-1 B cell | 7.45e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 6.10e-08 | 1 |
seminiferous tubule of testis | 6.10e-08 | 1 |
epithelium of male gonad | 6.10e-08 | 1 |
epithelial cord | 6.10e-08 | 1 |
sex cord | 6.10e-08 | 1 |
seminiferous tubule epithelium | 6.10e-08 | 1 |
testis sex cord | 6.10e-08 | 1 |
genital ridge | 6.10e-08 | 1 |
primitive sex cord of indifferent gonad | 6.10e-08 | 1 |
coelomic epithelium | 6.10e-08 | 1 |
cranial nerve II | 7.97e-08 | 1 |
cranial nerve | 7.97e-08 | 1 |
nerve trunk | 7.97e-08 | 1 |
nerve connecting eye with brain | 7.97e-08 | 1 |
nerve | 7.97e-08 | 1 |
retinal neural layer | 7.97e-08 | 1 |
presumptive neural retina | 7.97e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 5.70e-08 | 1 |
meningioma | 5.70e-08 | 1 |
lymphatic system cancer | 7.45e-08 | 1 |
lymphosarcoma | 7.45e-08 | 1 |